PDB Chemical Component SBP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SBP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
BD OE1 1.437 1.420
BD OE2 1.466 1.424
BD OE3 1.439 1.429
OE1 CZ1 1.428 1.429
OE2 CZ2 1.440 1.442
OE3 CZ3 1.439 1.450
CZ2 CZ3 1.542 1.549
CZ2 HZ22 1.087 1.090
CZ2 HZ23 1.091 1.090
CZ3 HZ32 1.090 1.090
CZ3 HZ33 1.086 1.089
CZ1 CH 1.512 1.530
CZ1 HZ12 1.090 1.090
CZ1 HZ13 1.092 1.090
CH CQ 1.530 1.529
CH HH2 1.089 1.090
CH HH3 1.089 1.090
CQ NI 1.457 1.465
CQ HQ2 1.091 1.090
CQ HQ3 1.091 1.091
NI CK 1.336 1.368
NI HI 1.007 0.970
CK NL1 1.330 1.332
CK NL2 1.336 1.331
NL1 HL11 1.007 0.970
NL1 HL12 1.009 0.970
NL2 HL21 1.010 0.971
NL2 HL22 1.007 0.969

Bond Angles for SBP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OE1 BD OE2 108.9 125.5
OE1 BD OE3 114.6 125.4
BD OE1 CZ1 117.6 106.8
OE2 BD OE3 105.6 109.1
BD OE2 CZ2 109.3 107.4
BD OE3 CZ3 112.9 104.8
OE1 CZ1 CH 109.7 109.5
OE1 CZ1 HZ12 110.6 109.5
OE1 CZ1 HZ13 109.1 109.5
OE2 CZ2 CZ3 106.9 102.9
OE2 CZ2 HZ22 111.3 110.7
OE2 CZ2 HZ23 108.0 110.7
OE3 CZ3 CZ2 103.6 101.5
OE3 CZ3 HZ32 111.4 111.2
OE3 CZ3 HZ33 111.7 110.9
CZ3 CZ2 HZ22 111.0 110.7
CZ3 CZ2 HZ23 109.2 110.7
CZ2 CZ3 HZ32 108.5 111.0
CZ2 CZ3 HZ33 111.0 111.0
HZ22 CZ2 HZ23 110.2 110.8
HZ32 CZ3 HZ33 110.3 110.9
CH CZ1 HZ12 108.1 109.5
CH CZ1 HZ13 109.7 109.5
CZ1 CH CQ 111.0 109.5
CZ1 CH HH2 108.6 109.5
CZ1 CH HH3 108.8 109.5
HZ12 CZ1 HZ13 109.8 109.4
CQ CH HH2 109.1 109.5
CQ CH HH3 111.3 109.5
CH CQ NI 108.2 109.5
CH CQ HQ2 109.3 109.5
CH CQ HQ3 111.0 109.5
HH2 CH HH3 108.0 109.4
NI CQ HQ2 109.8 109.5
NI CQ HQ3 108.9 109.4
CQ NI CK 125.1 120.0
CQ NI HI 116.1 120.0
HQ2 CQ HQ3 109.7 109.4
CK NI HI 118.7 120.1
NI CK NL1 120.4 119.9
NI CK NL2 119.8 120.1
NL1 CK NL2 119.8 120.0
CK NL1 HL11 119.0 120.0
CK NL1 HL12 120.6 120.1
CK NL2 HL21 121.2 120.0
CK NL2 HL22 118.2 120.1
HL11 NL1 HL12 120.4 120.0
HL21 NL2 HL22 120.3 119.9

Torsion Angles for SBP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OE2 BD OE1 OE3 242.0 180.3
OE1 BD OE2 CZ2 134.8 181.2
OE1 BD OE3 CZ3 235.7 155.2
BD OE1 CZ1 CH 179.8 180.0
BD OE1 CZ1 HZ12 298.9 60.0
BD OE1 CZ1 HZ13 59.7 300.1
OE1 BD OE2 OE3 123.6 179.8
OE2 BD OE1 CZ1 153.9 180.0
OE2 BD OE3 CZ3 355.6 335.0
BD OE2 CZ2 CZ3 346.5 20.9
BD OE2 CZ2 HZ22 225.1 139.3
BD OE2 CZ2 HZ23 103.9 262.5
OE1 BD OE3 OE2 240.2 180.2
OE3 BD OE1 CZ1 271.9 359.7
OE3 BD OE2 CZ2 11.3 1.5
BD OE3 CZ3 CZ2 356.5 36.4
BD OE3 CZ3 HZ32 113.0 278.3
BD OE3 CZ3 HZ33 236.9 154.3
CZ1 OE1 BD OE2 153.9 180.0
CZ1 OE1 BD OE3 271.9 359.7
CH CZ1 OE1 HZ12 240.9 120.0
CH CZ1 OE1 HZ13 120.1 239.9
OE1 CZ1 CH CQ 173.4 180.0
OE1 CZ1 CH HH2 53.6 60.0
OE1 CZ1 CH HH3 296.2 300.1
HZ12 CZ1 OE1 HZ13 239.2 119.9
CZ2 OE2 BD OE3 11.3 1.5
OE3 CZ3 CZ2 OE2 10.3 324.7
CZ3 CZ2 OE2 HZ22 121.4 241.7
CZ3 CZ2 OE2 HZ23 242.5 118.4
OE2 CZ2 CZ3 HZ32 251.8 83.0
OE2 CZ2 CZ3 HZ33 130.3 206.9
HZ22 CZ2 OE2 HZ23 121.1 236.7
OE2 CZ2 CZ3 OE3 10.3 324.7
OE3 CZ3 CZ2 HZ22 131.9 206.4
OE3 CZ3 CZ2 HZ23 253.6 83.1
CZ2 CZ3 OE3 HZ32 243.5 118.1
CZ2 CZ3 OE3 HZ33 119.5 242.0
HZ32 CZ3 OE3 HZ33 236.1 123.9
OE2 CZ2 CZ3 HZ22 238.5 118.3
OE2 CZ2 CZ3 HZ23 116.7 241.6
OE3 CZ3 CZ2 HZ32 118.6 241.8
OE3 CZ3 CZ2 HZ33 240.0 117.9
HZ22 CZ2 CZ3 HZ23 238.2 123.3
HZ32 CZ3 CZ2 HZ33 121.4 236.1
OE2 CZ2 HZ22 CZ3 119.0 246.5
OE2 CZ2 HZ22 HZ23 240.2 123.3
CZ3 CZ2 HZ22 HZ23 121.2 236.8
HZ22 CZ2 CZ3 HZ32 13.3 324.6
HZ22 CZ2 CZ3 HZ33 251.9 88.5
OE2 CZ2 HZ23 CZ3 244.0 113.5
OE2 CZ2 HZ23 HZ22 121.8 236.8
CZ3 CZ2 HZ23 HZ22 237.7 123.2
HZ23 CZ2 CZ3 HZ32 135.1 201.4
HZ23 CZ2 CZ3 HZ33 13.7 325.3
OE3 CZ3 HZ32 CZ2 246.5 112.2
OE3 CZ3 HZ32 HZ33 124.7 236.1
HZ32 CZ3 CZ2 HZ22 13.3 324.6
HZ32 CZ3 CZ2 HZ23 135.1 201.4
CZ2 CZ3 HZ32 HZ33 238.2 124.0
OE3 CZ3 HZ33 CZ2 115.1 248.0
OE3 CZ3 HZ33 HZ32 235.5 124.1
HZ33 CZ3 CZ2 HZ22 251.9 88.5
HZ33 CZ3 CZ2 HZ23 13.7 325.3
CZ2 CZ3 HZ33 HZ32 120.4 236.0
OE1 CZ1 CH HZ12 120.6 240.0
OE1 CZ1 CH HZ13 240.3 120.1
HZ12 CZ1 CH HZ13 119.6 240.1
CQ CH CZ1 HH2 119.9 120.0
CQ CH CZ1 HH3 237.2 239.9
CZ1 CH CQ NI 180.9 180.0
CZ1 CH CQ HQ2 61.4 60.0
CZ1 CH CQ HQ3 300.2 300.0
HH2 CH CZ1 HH3 117.4 119.9
OE1 CZ1 HZ12 CH 239.9 120.0
OE1 CZ1 HZ12 HZ13 120.4 240.0
CH CZ1 HZ12 HZ13 240.4 120.0
HZ12 CZ1 CH CQ 52.8 300.0
HZ12 CZ1 CH HH2 292.9 180.0
HZ12 CZ1 CH HH3 175.6 60.1
OE1 CZ1 HZ13 CH 120.1 239.9
OE1 CZ1 HZ13 HZ12 238.7 119.9
CH CZ1 HZ13 HZ12 118.6 240.0
HZ13 CZ1 CH CQ 293.2 60.0
HZ13 CZ1 CH HH2 173.3 299.9
HZ13 CZ1 CH HH3 55.9 180.0
CQ CH CZ1 HZ12 52.8 300.0
CQ CH CZ1 HZ13 293.2 60.0
CZ1 CH CQ HH2 240.4 240.0
CZ1 CH CQ HH3 121.3 120.0
HH2 CH CQ HH3 241.0 240.1
NI CQ CH HQ2 119.5 120.0
NI CQ CH HQ3 240.6 240.0
CH CQ NI CK 185.6 180.0
CH CQ NI HI 4.6 0.1
HQ2 CQ CH HQ3 121.2 120.0
HH2 CH CZ1 HZ12 292.9 180.0
HH2 CH CZ1 HZ13 173.3 299.9
CZ1 CH HH2 CQ 121.1 120.1
CZ1 CH HH2 HH3 242.1 240.0
CQ CH HH2 HH3 121.0 120.0
HH2 CH CQ NI 300.5 300.0
HH2 CH CQ HQ2 181.0 180.0
HH2 CH CQ HQ3 59.9 60.0
HH3 CH CZ1 HZ12 175.6 60.1
HH3 CH CZ1 HZ13 55.9 180.0
CZ1 CH HH3 CQ 237.4 239.9
CZ1 CH HH3 HH2 117.7 120.0
CQ CH HH3 HH2 240.3 240.0
HH3 CH CQ NI 59.5 60.0
HH3 CH CQ HQ2 300.1 299.9
HH3 CH CQ HQ3 178.9 180.0
NI CQ CH HH2 300.5 300.0
NI CQ CH HH3 59.5 60.0
CH CQ NI HQ2 240.8 240.0
CH CQ NI HQ3 120.7 120.0
HQ2 CQ NI HQ3 239.9 240.0
CK NI CQ HI 181.1 179.9
CQ NI CK NL1 359.0 180.0
CQ NI CK NL2 181.0 0.1
HQ2 CQ CH HH2 181.0 180.0
HQ2 CQ CH HH3 300.1 299.9
CH CQ HQ2 NI 118.5 120.0
CH CQ HQ2 HQ3 238.1 240.0
NI CQ HQ2 HQ3 119.6 120.0
HQ2 CQ NI CK 304.8 300.0
HQ2 CQ NI HI 123.8 120.1
HQ3 CQ CH HH2 59.9 60.0
HQ3 CQ CH HH3 178.9 180.0
CH CQ HQ3 NI 241.1 240.0
CH CQ HQ3 HQ2 120.9 120.0
NI CQ HQ3 HQ2 239.9 240.0
HQ3 CQ NI CK 64.9 60.0
HQ3 CQ NI HI 243.9 240.0
CK NI CQ HQ2 304.8 300.0
CK NI CQ HQ3 64.9 60.0
CQ NI CK HI 178.9 180.1
NL1 CK NI NL2 178.0 179.9
NI CK NL1 HL11 6.2 180.1
NI CK NL1 HL12 185.9 0.0
NI CK NL2 HL21 357.3 359.9
NI CK NL2 HL22 170.8 179.7
HI NI CQ HQ2 123.8 120.1
HI NI CQ HQ3 243.9 240.0
CQ NI HI CK 181.0 179.9
HI NI CK NL1 180.1 359.9
HI NI CK NL2 2.1 180.0
NL1 CK NI HI 180.1 359.9
NI CK NL1 NL2 182.0 180.1
NL1 CK NL2 HL21 179.3 180.0
NL1 CK NL2 HL22 352.8 359.8
HL11 NL1 CK HL12 180.3 180.0
NL2 CK NI HI 2.1 180.0
NI CK NL2 NL1 178.0 179.9
NL2 CK NL1 HL11 184.2 0.0
NL2 CK NL1 HL12 3.9 180.0
HL21 NL2 CK HL22 186.5 180.2
HL11 NL1 CK NL2 184.2 0.0
CK NL1 HL11 HL12 179.7 180.0
HL12 NL1 CK NL2 3.9 180.0
CK NL1 HL12 HL11 180.3 180.0
CK NL2 HL21 HL22 173.4 179.8
CK NL2 HL22 HL21 186.4 180.2