PDB Chemical Component SBP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SBP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
BD |
OE1 |
1.437 |
1.420 |
BD |
OE2 |
1.466 |
1.424 |
BD |
OE3 |
1.439 |
1.429 |
OE1 |
CZ1 |
1.428 |
1.429 |
OE2 |
CZ2 |
1.440 |
1.442 |
OE3 |
CZ3 |
1.439 |
1.450 |
CZ2 |
CZ3 |
1.542 |
1.549 |
CZ2 |
HZ22 |
1.087 |
1.090 |
CZ2 |
HZ23 |
1.091 |
1.090 |
CZ3 |
HZ32 |
1.090 |
1.090 |
CZ3 |
HZ33 |
1.086 |
1.089 |
CZ1 |
CH |
1.512 |
1.530 |
CZ1 |
HZ12 |
1.090 |
1.090 |
CZ1 |
HZ13 |
1.092 |
1.090 |
CH |
CQ |
1.530 |
1.529 |
CH |
HH2 |
1.089 |
1.090 |
CH |
HH3 |
1.089 |
1.090 |
CQ |
NI |
1.457 |
1.465 |
CQ |
HQ2 |
1.091 |
1.090 |
CQ |
HQ3 |
1.091 |
1.091 |
NI |
CK |
1.336 |
1.368 |
NI |
HI |
1.007 |
0.970 |
CK |
NL1 |
1.330 |
1.332 |
CK |
NL2 |
1.336 |
1.331 |
NL1 |
HL11 |
1.007 |
0.970 |
NL1 |
HL12 |
1.009 |
0.970 |
NL2 |
HL21 |
1.010 |
0.971 |
NL2 |
HL22 |
1.007 |
0.969 |
Bond Angles for SBP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
OE1 |
BD |
OE2 |
108.9 |
125.5 |
OE1 |
BD |
OE3 |
114.6 |
125.4 |
BD |
OE1 |
CZ1 |
117.6 |
106.8 |
OE2 |
BD |
OE3 |
105.6 |
109.1 |
BD |
OE2 |
CZ2 |
109.3 |
107.4 |
BD |
OE3 |
CZ3 |
112.9 |
104.8 |
OE1 |
CZ1 |
CH |
109.7 |
109.5 |
OE1 |
CZ1 |
HZ12 |
110.6 |
109.5 |
OE1 |
CZ1 |
HZ13 |
109.1 |
109.5 |
OE2 |
CZ2 |
CZ3 |
106.9 |
102.9 |
OE2 |
CZ2 |
HZ22 |
111.3 |
110.7 |
OE2 |
CZ2 |
HZ23 |
108.0 |
110.7 |
OE3 |
CZ3 |
CZ2 |
103.6 |
101.5 |
OE3 |
CZ3 |
HZ32 |
111.4 |
111.2 |
OE3 |
CZ3 |
HZ33 |
111.7 |
110.9 |
CZ3 |
CZ2 |
HZ22 |
111.0 |
110.7 |
CZ3 |
CZ2 |
HZ23 |
109.2 |
110.7 |
CZ2 |
CZ3 |
HZ32 |
108.5 |
111.0 |
CZ2 |
CZ3 |
HZ33 |
111.0 |
111.0 |
HZ22 |
CZ2 |
HZ23 |
110.2 |
110.8 |
HZ32 |
CZ3 |
HZ33 |
110.3 |
110.9 |
CH |
CZ1 |
HZ12 |
108.1 |
109.5 |
CH |
CZ1 |
HZ13 |
109.7 |
109.5 |
CZ1 |
CH |
CQ |
111.0 |
109.5 |
CZ1 |
CH |
HH2 |
108.6 |
109.5 |
CZ1 |
CH |
HH3 |
108.8 |
109.5 |
HZ12 |
CZ1 |
HZ13 |
109.8 |
109.4 |
CQ |
CH |
HH2 |
109.1 |
109.5 |
CQ |
CH |
HH3 |
111.3 |
109.5 |
CH |
CQ |
NI |
108.2 |
109.5 |
CH |
CQ |
HQ2 |
109.3 |
109.5 |
CH |
CQ |
HQ3 |
111.0 |
109.5 |
HH2 |
CH |
HH3 |
108.0 |
109.4 |
NI |
CQ |
HQ2 |
109.8 |
109.5 |
NI |
CQ |
HQ3 |
108.9 |
109.4 |
CQ |
NI |
CK |
125.1 |
120.0 |
CQ |
NI |
HI |
116.1 |
120.0 |
HQ2 |
CQ |
HQ3 |
109.7 |
109.4 |
CK |
NI |
HI |
118.7 |
120.1 |
NI |
CK |
NL1 |
120.4 |
119.9 |
NI |
CK |
NL2 |
119.8 |
120.1 |
NL1 |
CK |
NL2 |
119.8 |
120.0 |
CK |
NL1 |
HL11 |
119.0 |
120.0 |
CK |
NL1 |
HL12 |
120.6 |
120.1 |
CK |
NL2 |
HL21 |
121.2 |
120.0 |
CK |
NL2 |
HL22 |
118.2 |
120.1 |
HL11 |
NL1 |
HL12 |
120.4 |
120.0 |
HL21 |
NL2 |
HL22 |
120.3 |
119.9 |
Torsion Angles for SBP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
OE2 |
BD |
OE1 |
OE3 |
242.0 |
180.3 |
OE1 |
BD |
OE2 |
CZ2 |
134.8 |
181.2 |
OE1 |
BD |
OE3 |
CZ3 |
235.7 |
155.2 |
BD |
OE1 |
CZ1 |
CH |
179.8 |
180.0 |
BD |
OE1 |
CZ1 |
HZ12 |
298.9 |
60.0 |
BD |
OE1 |
CZ1 |
HZ13 |
59.7 |
300.1 |
OE1 |
BD |
OE2 |
OE3 |
123.6 |
179.8 |
OE2 |
BD |
OE1 |
CZ1 |
153.9 |
180.0 |
OE2 |
BD |
OE3 |
CZ3 |
355.6 |
335.0 |
BD |
OE2 |
CZ2 |
CZ3 |
346.5 |
20.9 |
BD |
OE2 |
CZ2 |
HZ22 |
225.1 |
139.3 |
BD |
OE2 |
CZ2 |
HZ23 |
103.9 |
262.5 |
OE1 |
BD |
OE3 |
OE2 |
240.2 |
180.2 |
OE3 |
BD |
OE1 |
CZ1 |
271.9 |
359.7 |
OE3 |
BD |
OE2 |
CZ2 |
11.3 |
1.5 |
BD |
OE3 |
CZ3 |
CZ2 |
356.5 |
36.4 |
BD |
OE3 |
CZ3 |
HZ32 |
113.0 |
278.3 |
BD |
OE3 |
CZ3 |
HZ33 |
236.9 |
154.3 |
CZ1 |
OE1 |
BD |
OE2 |
153.9 |
180.0 |
CZ1 |
OE1 |
BD |
OE3 |
271.9 |
359.7 |
CH |
CZ1 |
OE1 |
HZ12 |
240.9 |
120.0 |
CH |
CZ1 |
OE1 |
HZ13 |
120.1 |
239.9 |
OE1 |
CZ1 |
CH |
CQ |
173.4 |
180.0 |
OE1 |
CZ1 |
CH |
HH2 |
53.6 |
60.0 |
OE1 |
CZ1 |
CH |
HH3 |
296.2 |
300.1 |
HZ12 |
CZ1 |
OE1 |
HZ13 |
239.2 |
119.9 |
CZ2 |
OE2 |
BD |
OE3 |
11.3 |
1.5 |
OE3 |
CZ3 |
CZ2 |
OE2 |
10.3 |
324.7 |
CZ3 |
CZ2 |
OE2 |
HZ22 |
121.4 |
241.7 |
CZ3 |
CZ2 |
OE2 |
HZ23 |
242.5 |
118.4 |
OE2 |
CZ2 |
CZ3 |
HZ32 |
251.8 |
83.0 |
OE2 |
CZ2 |
CZ3 |
HZ33 |
130.3 |
206.9 |
HZ22 |
CZ2 |
OE2 |
HZ23 |
121.1 |
236.7 |
OE2 |
CZ2 |
CZ3 |
OE3 |
10.3 |
324.7 |
OE3 |
CZ3 |
CZ2 |
HZ22 |
131.9 |
206.4 |
OE3 |
CZ3 |
CZ2 |
HZ23 |
253.6 |
83.1 |
CZ2 |
CZ3 |
OE3 |
HZ32 |
243.5 |
118.1 |
CZ2 |
CZ3 |
OE3 |
HZ33 |
119.5 |
242.0 |
HZ32 |
CZ3 |
OE3 |
HZ33 |
236.1 |
123.9 |
OE2 |
CZ2 |
CZ3 |
HZ22 |
238.5 |
118.3 |
OE2 |
CZ2 |
CZ3 |
HZ23 |
116.7 |
241.6 |
OE3 |
CZ3 |
CZ2 |
HZ32 |
118.6 |
241.8 |
OE3 |
CZ3 |
CZ2 |
HZ33 |
240.0 |
117.9 |
HZ22 |
CZ2 |
CZ3 |
HZ23 |
238.2 |
123.3 |
HZ32 |
CZ3 |
CZ2 |
HZ33 |
121.4 |
236.1 |
OE2 |
CZ2 |
HZ22 |
CZ3 |
119.0 |
246.5 |
OE2 |
CZ2 |
HZ22 |
HZ23 |
240.2 |
123.3 |
CZ3 |
CZ2 |
HZ22 |
HZ23 |
121.2 |
236.8 |
HZ22 |
CZ2 |
CZ3 |
HZ32 |
13.3 |
324.6 |
HZ22 |
CZ2 |
CZ3 |
HZ33 |
251.9 |
88.5 |
OE2 |
CZ2 |
HZ23 |
CZ3 |
244.0 |
113.5 |
OE2 |
CZ2 |
HZ23 |
HZ22 |
121.8 |
236.8 |
CZ3 |
CZ2 |
HZ23 |
HZ22 |
237.7 |
123.2 |
HZ23 |
CZ2 |
CZ3 |
HZ32 |
135.1 |
201.4 |
HZ23 |
CZ2 |
CZ3 |
HZ33 |
13.7 |
325.3 |
OE3 |
CZ3 |
HZ32 |
CZ2 |
246.5 |
112.2 |
OE3 |
CZ3 |
HZ32 |
HZ33 |
124.7 |
236.1 |
HZ32 |
CZ3 |
CZ2 |
HZ22 |
13.3 |
324.6 |
HZ32 |
CZ3 |
CZ2 |
HZ23 |
135.1 |
201.4 |
CZ2 |
CZ3 |
HZ32 |
HZ33 |
238.2 |
124.0 |
OE3 |
CZ3 |
HZ33 |
CZ2 |
115.1 |
248.0 |
OE3 |
CZ3 |
HZ33 |
HZ32 |
235.5 |
124.1 |
HZ33 |
CZ3 |
CZ2 |
HZ22 |
251.9 |
88.5 |
HZ33 |
CZ3 |
CZ2 |
HZ23 |
13.7 |
325.3 |
CZ2 |
CZ3 |
HZ33 |
HZ32 |
120.4 |
236.0 |
OE1 |
CZ1 |
CH |
HZ12 |
120.6 |
240.0 |
OE1 |
CZ1 |
CH |
HZ13 |
240.3 |
120.1 |
HZ12 |
CZ1 |
CH |
HZ13 |
119.6 |
240.1 |
CQ |
CH |
CZ1 |
HH2 |
119.9 |
120.0 |
CQ |
CH |
CZ1 |
HH3 |
237.2 |
239.9 |
CZ1 |
CH |
CQ |
NI |
180.9 |
180.0 |
CZ1 |
CH |
CQ |
HQ2 |
61.4 |
60.0 |
CZ1 |
CH |
CQ |
HQ3 |
300.2 |
300.0 |
HH2 |
CH |
CZ1 |
HH3 |
117.4 |
119.9 |
OE1 |
CZ1 |
HZ12 |
CH |
239.9 |
120.0 |
OE1 |
CZ1 |
HZ12 |
HZ13 |
120.4 |
240.0 |
CH |
CZ1 |
HZ12 |
HZ13 |
240.4 |
120.0 |
HZ12 |
CZ1 |
CH |
CQ |
52.8 |
300.0 |
HZ12 |
CZ1 |
CH |
HH2 |
292.9 |
180.0 |
HZ12 |
CZ1 |
CH |
HH3 |
175.6 |
60.1 |
OE1 |
CZ1 |
HZ13 |
CH |
120.1 |
239.9 |
OE1 |
CZ1 |
HZ13 |
HZ12 |
238.7 |
119.9 |
CH |
CZ1 |
HZ13 |
HZ12 |
118.6 |
240.0 |
HZ13 |
CZ1 |
CH |
CQ |
293.2 |
60.0 |
HZ13 |
CZ1 |
CH |
HH2 |
173.3 |
299.9 |
HZ13 |
CZ1 |
CH |
HH3 |
55.9 |
180.0 |
CQ |
CH |
CZ1 |
HZ12 |
52.8 |
300.0 |
CQ |
CH |
CZ1 |
HZ13 |
293.2 |
60.0 |
CZ1 |
CH |
CQ |
HH2 |
240.4 |
240.0 |
CZ1 |
CH |
CQ |
HH3 |
121.3 |
120.0 |
HH2 |
CH |
CQ |
HH3 |
241.0 |
240.1 |
NI |
CQ |
CH |
HQ2 |
119.5 |
120.0 |
NI |
CQ |
CH |
HQ3 |
240.6 |
240.0 |
CH |
CQ |
NI |
CK |
185.6 |
180.0 |
CH |
CQ |
NI |
HI |
4.6 |
0.1 |
HQ2 |
CQ |
CH |
HQ3 |
121.2 |
120.0 |
HH2 |
CH |
CZ1 |
HZ12 |
292.9 |
180.0 |
HH2 |
CH |
CZ1 |
HZ13 |
173.3 |
299.9 |
CZ1 |
CH |
HH2 |
CQ |
121.1 |
120.1 |
CZ1 |
CH |
HH2 |
HH3 |
242.1 |
240.0 |
CQ |
CH |
HH2 |
HH3 |
121.0 |
120.0 |
HH2 |
CH |
CQ |
NI |
300.5 |
300.0 |
HH2 |
CH |
CQ |
HQ2 |
181.0 |
180.0 |
HH2 |
CH |
CQ |
HQ3 |
59.9 |
60.0 |
HH3 |
CH |
CZ1 |
HZ12 |
175.6 |
60.1 |
HH3 |
CH |
CZ1 |
HZ13 |
55.9 |
180.0 |
CZ1 |
CH |
HH3 |
CQ |
237.4 |
239.9 |
CZ1 |
CH |
HH3 |
HH2 |
117.7 |
120.0 |
CQ |
CH |
HH3 |
HH2 |
240.3 |
240.0 |
HH3 |
CH |
CQ |
NI |
59.5 |
60.0 |
HH3 |
CH |
CQ |
HQ2 |
300.1 |
299.9 |
HH3 |
CH |
CQ |
HQ3 |
178.9 |
180.0 |
NI |
CQ |
CH |
HH2 |
300.5 |
300.0 |
NI |
CQ |
CH |
HH3 |
59.5 |
60.0 |
CH |
CQ |
NI |
HQ2 |
240.8 |
240.0 |
CH |
CQ |
NI |
HQ3 |
120.7 |
120.0 |
HQ2 |
CQ |
NI |
HQ3 |
239.9 |
240.0 |
CK |
NI |
CQ |
HI |
181.1 |
179.9 |
CQ |
NI |
CK |
NL1 |
359.0 |
180.0 |
CQ |
NI |
CK |
NL2 |
181.0 |
0.1 |
HQ2 |
CQ |
CH |
HH2 |
181.0 |
180.0 |
HQ2 |
CQ |
CH |
HH3 |
300.1 |
299.9 |
CH |
CQ |
HQ2 |
NI |
118.5 |
120.0 |
CH |
CQ |
HQ2 |
HQ3 |
238.1 |
240.0 |
NI |
CQ |
HQ2 |
HQ3 |
119.6 |
120.0 |
HQ2 |
CQ |
NI |
CK |
304.8 |
300.0 |
HQ2 |
CQ |
NI |
HI |
123.8 |
120.1 |
HQ3 |
CQ |
CH |
HH2 |
59.9 |
60.0 |
HQ3 |
CQ |
CH |
HH3 |
178.9 |
180.0 |
CH |
CQ |
HQ3 |
NI |
241.1 |
240.0 |
CH |
CQ |
HQ3 |
HQ2 |
120.9 |
120.0 |
NI |
CQ |
HQ3 |
HQ2 |
239.9 |
240.0 |
HQ3 |
CQ |
NI |
CK |
64.9 |
60.0 |
HQ3 |
CQ |
NI |
HI |
243.9 |
240.0 |
CK |
NI |
CQ |
HQ2 |
304.8 |
300.0 |
CK |
NI |
CQ |
HQ3 |
64.9 |
60.0 |
CQ |
NI |
CK |
HI |
178.9 |
180.1 |
NL1 |
CK |
NI |
NL2 |
178.0 |
179.9 |
NI |
CK |
NL1 |
HL11 |
6.2 |
180.1 |
NI |
CK |
NL1 |
HL12 |
185.9 |
0.0 |
NI |
CK |
NL2 |
HL21 |
357.3 |
359.9 |
NI |
CK |
NL2 |
HL22 |
170.8 |
179.7 |
HI |
NI |
CQ |
HQ2 |
123.8 |
120.1 |
HI |
NI |
CQ |
HQ3 |
243.9 |
240.0 |
CQ |
NI |
HI |
CK |
181.0 |
179.9 |
HI |
NI |
CK |
NL1 |
180.1 |
359.9 |
HI |
NI |
CK |
NL2 |
2.1 |
180.0 |
NL1 |
CK |
NI |
HI |
180.1 |
359.9 |
NI |
CK |
NL1 |
NL2 |
182.0 |
180.1 |
NL1 |
CK |
NL2 |
HL21 |
179.3 |
180.0 |
NL1 |
CK |
NL2 |
HL22 |
352.8 |
359.8 |
HL11 |
NL1 |
CK |
HL12 |
180.3 |
180.0 |
NL2 |
CK |
NI |
HI |
2.1 |
180.0 |
NI |
CK |
NL2 |
NL1 |
178.0 |
179.9 |
NL2 |
CK |
NL1 |
HL11 |
184.2 |
0.0 |
NL2 |
CK |
NL1 |
HL12 |
3.9 |
180.0 |
HL21 |
NL2 |
CK |
HL22 |
186.5 |
180.2 |
HL11 |
NL1 |
CK |
NL2 |
184.2 |
0.0 |
CK |
NL1 |
HL11 |
HL12 |
179.7 |
180.0 |
HL12 |
NL1 |
CK |
NL2 |
3.9 |
180.0 |
CK |
NL1 |
HL12 |
HL11 |
180.3 |
180.0 |
CK |
NL2 |
HL21 |
HL22 |
173.4 |
179.8 |
CK |
NL2 |
HL22 |
HL21 |
186.4 |
180.2 |