PDB Chemical Component SBN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SBN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.423	1.388
C1	C6	1.412	1.381
C1	H1	1.103	1.079
C2	C3	1.441	1.404
C2	N1	1.429	1.390
C3	C4	1.466	1.396
C3	C13	1.432	1.431
C4	C5	1.439	1.378
C4	S	1.738	1.762
C5	C6	1.425	1.385
C5	H5	1.103	1.080
C6	H6	1.103	1.079
S	O1	1.472	1.421
S	O2	1.464	1.422
S	C7	1.717	1.761
C7	C8	1.444	1.382
C7	C12	1.421	1.381
C8	C9	1.421	1.383
C8	H8	1.103	1.080
C9	C10	1.430	1.381
C9	C14	1.535	1.507
C10	C11	1.438	1.381
C10	H10	1.103	1.080
C11	C12	1.433	1.383
C11	C15	1.530	1.508
C12	H12	1.103	1.080
N2	C13	1.146	1.136
N1	HN11	1.020	0.970
N1	HN12	1.020	0.969
C14	H141	1.115	1.090
C14	H142	1.115	1.090
C14	H143	1.114	1.090
C15	H151	1.115	1.089
C15	H152	1.116	1.090
C15	H153	1.115	1.090

Bond Angles for SBN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	120.0	120.1
C2	C1	H1	120.4	120.0
C1	C2	C3	119.9	119.7
C1	C2	N1	119.2	120.2
C6	C1	H1	119.6	120.0
C1	C6	C5	120.4	120.4
C1	C6	H6	119.3	119.8
C3	C2	N1	120.9	120.2
C2	C3	C4	121.3	119.5
C2	C3	C13	118.5	120.2
C2	N1	HN11	119.3	120.0
C2	N1	HN12	108.7	120.0
C4	C3	C13	120.2	120.2
C3	C4	C5	116.0	120.0
C3	C4	S	124.2	120.0
C3	C13	N2	179.8	179.9
C5	C4	S	119.8	120.0
C4	C5	C6	122.4	120.4
C4	C5	H5	119.3	119.8
C4	S	O1	109.3	105.8
C4	S	O2	110.6	105.7
C4	S	C7	105.3	107.4
C6	C5	H5	118.3	119.8
C5	C6	H6	120.3	119.8
O1	S	O2	114.5	125.3
O1	S	C7	106.5	105.8
O2	S	C7	110.2	105.8
S	C7	C8	119.7	119.9
S	C7	C12	121.5	120.0
C8	C7	C12	118.7	120.1
C7	C8	C9	120.9	120.0
C7	C8	H8	120.4	120.0
C7	C12	C11	121.6	119.9
C7	C12	H12	118.7	120.0
C9	C8	H8	118.7	120.0
C8	C9	C10	119.2	120.0
C8	C9	C14	119.3	120.0
C10	C9	C14	121.5	120.0
C9	C10	C11	121.1	120.0
C9	C10	H10	119.2	120.0
C9	C14	H141	119.3	109.4
C9	C14	H142	108.7	109.5
C9	C14	H143	108.7	109.4
C11	C10	H10	119.7	120.0
C10	C11	C12	118.4	120.0
C10	C11	C15	121.4	120.0
C12	C11	C15	120.2	119.9
C11	C12	H12	119.6	120.0
C11	C15	H151	121.4	109.4
C11	C15	H152	107.9	109.5
C11	C15	H153	108.0	109.5
HN11	N1	HN12	108.6	120.0
H141	C14	H142	108.7	109.5
H141	C14	H143	108.7	109.5
H142	C14	H143	101.3	109.5
H151	C15	H152	107.9	109.5
H151	C15	H153	108.0	109.5
H152	C15	H153	101.9	109.5

Torsion Angles for SBN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.0	180.0
C2	C1	C6	C5	0.1	360.0
C2	C1	C6	H6	180.1	180.0
C3	C2	C1	N1	181.3	179.8
C1	C2	C3	C4	0.2	0.5
C1	C2	C3	C13	180.3	179.9
C1	C2	N1	HN11	180.0	0.1
C1	C2	N1	HN12	54.8	180.0
C2	C1	C6	H1	180.0	180.0
C6	C1	C2	C3	359.8	359.8
C6	C1	C2	N1	178.5	180.0
C4	C5	C6	C1	359.9	360.0
C1	C6	C5	H5	179.9	180.0
C5	C6	C1	H6	180.0	179.9
C2	C1	H1	C6	180.0	180.0
H1	C1	C2	C3	179.8	179.8
H1	C1	C2	N1	358.5	360.0
H1	C1	C6	C5	180.1	180.0
H1	C1	C6	H6	0.1	0.0
C3	C2	C1	C6	359.8	359.8
C3	C2	C1	H1	179.8	179.8
C1	C2	C3	N1	178.7	180.2
C3	C2	N1	HN11	358.7	180.3
C3	C2	N1	HN12	233.5	0.2
C4	C3	C2	C13	179.8	180.5
C2	C3	C4	C5	359.9	359.5
C2	C3	C4	S	178.3	179.8
C2	C3	C13	N2	203.1	98.1
N1	C2	C1	C6	178.5	180.0
N1	C2	C1	H1	358.5	360.0
C1	C2	N1	C3	181.3	179.8
N1	C2	C3	C4	181.5	180.3
N1	C2	C3	C13	1.6	359.8
HN11	N1	C2	HN12	125.2	180.1
C4	C3	C2	N1	181.5	180.3
C2	C3	C4	C13	180.2	179.5
C4	C3	C13	N2	23.3	277.6
C5	C4	C3	S	181.6	179.7
C3	C4	C5	C6	0.0	0.3
C3	C4	C5	H5	180.1	180.2
C3	C4	S	O1	193.4	187.1
C3	C4	S	O2	320.3	52.3
C3	C4	S	C7	79.3	299.7
C13	C3	C2	N1	1.6	359.8
C2	C3	C13	C4	179.8	180.5
C13	C3	C4	C5	179.7	180.0
C13	C3	C4	S	358.1	0.3
C1	C6	C5	C4	359.9	360.0
C5	C4	C3	C13	179.7	180.0
C3	C4	C5	S	178.5	180.3
C5	C4	S	O1	11.8	7.4
C5	C4	S	O2	138.7	232.6
C5	C4	S	C7	257.7	120.0
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	179.9	179.9
S	C4	C3	C13	358.1	0.3
C3	C4	S	C5	181.7	179.7
S	C4	C5	C6	181.6	180.0
S	C4	C5	H5	1.6	360.0
O1	S	C4	O2	233.1	134.8
O1	S	C4	C7	114.1	247.3
O2	S	C4	C7	241.0	112.6
C4	S	C7	C8	69.8	270.2
C4	S	C7	C12	251.2	90.0
C5	C6	C1	H1	180.1	180.0
C1	C6	C5	H6	180.0	180.1
C6	C5	C4	S	181.6	180.0
C4	C5	C6	H5	180.0	180.0
H5	C5	C4	S	1.6	360.0
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	H6	359.9	360.0
H6	C6	C1	H1	0.1	0.0
C1	C6	H6	C5	180.0	179.9
H6	C6	C5	H5	359.9	360.0
C4	S	O1	O2	124.7	236.9
C4	S	O1	C7	246.7	113.8
O2	S	O1	C7	122.0	236.9
O1	S	C7	C8	313.8	22.8
O1	S	C7	C12	135.1	202.6
C4	S	O2	O1	236.0	123.1
C4	S	O2	C7	116.0	246.3
O1	S	O2	C7	240.0	123.2
O2	S	C7	C8	189.1	157.6
O2	S	C7	C12	10.4	337.4
C4	S	C7	O1	116.0	247.4
C4	S	C7	O2	240.7	112.6
O1	S	C7	O2	124.7	225.2
C8	C7	S	C12	178.7	180.2
S	C7	C8	C9	182.0	180.3
S	C7	C8	H8	2.0	359.8
S	C7	C12	C11	178.1	180.0
S	C7	C12	H12	358.1	360.0
S	C7	C8	C12	181.3	179.8
C8	C7	C12	C11	359.4	359.8
C8	C7	C12	H12	179.5	179.8
C9	C8	C7	H8	180.0	180.6
C7	C8	C9	C10	359.8	359.5
C7	C8	C9	C14	179.8	179.8
S	C7	C12	C8	178.7	180.2
C12	C7	C8	C9	0.7	0.5
C12	C7	C8	H8	180.7	179.9
C10	C11	C12	C7	0.0	360.0
C7	C12	C11	C15	178.9	180.0
C11	C12	C7	H12	179.9	180.0
C9	C8	C7	C12	0.7	0.5
C7	C8	C9	H8	180.0	179.4
C10	C9	C8	C14	180.0	179.7
C8	C9	C10	C11	359.6	0.3
C8	C9	C10	H10	179.6	180.3
C8	C9	C14	H141	180.0	269.7
C8	C9	C14	H142	305.3	29.7
C8	C9	C14	H143	54.7	149.7
H8	C8	C7	C12	180.7	179.9
C7	C8	H8	C9	180.0	180.6
H8	C8	C9	C10	179.8	180.0
H8	C8	C9	C14	359.8	0.4
C10	C9	C8	H8	179.8	180.0
C8	C9	C10	C14	180.0	180.3
C10	C9	C14	H141	0.0	90.0
C10	C9	C14	H142	125.2	210.0
C10	C9	C14	H143	234.7	330.0
C11	C10	C9	H10	180.0	180.0
C9	C10	C11	C12	0.5	360.0
C9	C10	C11	C15	181.6	180.0
C14	C9	C8	H8	359.8	0.4
C8	C9	C14	C10	180.0	179.7
C14	C9	C10	C11	179.6	179.9
C14	C9	C10	H10	359.6	359.9
H141	C14	C9	H142	234.8	240.0
H141	C14	C9	H143	125.3	120.0
H142	C14	C9	H143	250.5	240.0
C7	C12	C11	C10	0.0	360.0
C11	C10	C9	C14	179.6	179.9
C9	C10	C11	H10	180.0	180.0
C12	C11	C10	C15	178.9	180.0
C10	C11	C12	H12	179.9	180.0
C10	C11	C15	H151	180.1	90.0
C10	C11	C15	H152	305.3	210.0
C10	C11	C15	H153	54.7	330.1
H10	C10	C9	C14	359.6	359.9
C9	C10	H10	C11	180.0	180.0
H10	C10	C11	C12	180.5	180.0
H10	C10	C11	C15	1.7	360.0
C7	C12	C11	H12	180.1	180.0
C12	C11	C10	H10	180.5	180.0
C10	C11	C12	C15	181.1	180.0
C12	C11	C15	H151	1.2	270.0
C12	C11	C15	H152	126.4	30.0
C12	C11	C15	H153	235.9	150.0
C15	C11	C10	H10	1.7	360.0
C10	C11	C15	C12	178.9	180.0
C15	C11	C12	H12	358.8	360.0
H151	C15	C11	H152	234.8	240.0
H151	C15	C11	H153	125.3	120.0
H152	C15	C11	H153	250.5	240.0
C7	C12	H12	C11	179.9	180.0
H12	C12	C11	C15	358.8	360.0
C2	N1	HN11	HN12	234.8	179.9
C2	N1	HN12	HN11	131.2	180.1
C9	C14	H141	H142	125.2	120.0
C9	C14	H141	H143	234.7	240.0
H142	C14	H141	H143	109.5	120.1
C9	C14	H142	H141	228.8	240.0
C9	C14	H142	H143	114.4	120.0
H141	C14	H142	H143	245.6	239.9
C9	C14	H143	H141	131.3	120.0
C9	C14	H143	H142	245.6	240.0
H141	C14	H143	H142	114.3	120.1
C11	C15	H151	H152	125.2	120.0
C11	C15	H151	H153	234.7	240.0
H152	C15	H151	H153	109.5	120.1
C11	C15	H152	H151	227.1	240.0
C11	C15	H152	H153	113.5	120.0
H151	C15	H152	H153	246.4	240.0
C11	C15	H153	H151	132.9	120.0
C11	C15	H153	H152	246.5	240.0
H151	C15	H153	H152	113.5	120.0