PDB Chemical Component SBG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SBG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.498 |
1.469 |
| CA |
CB |
1.533 |
1.529 |
| CB |
OG |
1.428 |
1.429 |
| CA |
C |
1.573 |
1.507 |
| C |
O |
1.243 |
1.208 |
| OG |
P1 |
1.614 |
1.611 |
| O2 |
P1 |
1.506 |
1.480 |
| P1 |
O1 |
1.512 |
1.610 |
| P1 |
C1 |
1.807 |
1.823 |
| C |
OXT |
1.336 |
1.342 |
| N |
HN1 |
1.000 |
1.008 |
| N |
HN2 |
1.000 |
1.009 |
| CA |
HA |
1.100 |
1.090 |
| CB |
HBC1 |
1.100 |
1.089 |
| CB |
HBC2 |
1.100 |
1.090 |
| OXT |
HOT |
0.950 |
0.968 |
| O1 |
H1 |
0.950 |
0.967 |
| C1 |
H1C1 |
1.100 |
1.090 |
| C1 |
H1C2 |
1.100 |
1.090 |
| C1 |
H1C3 |
1.100 |
1.090 |
Bond Angles for SBG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
CB |
111.3 |
109.5 |
| N |
CA |
C |
113.8 |
109.5 |
| CA |
N |
HN1 |
109.5 |
111.0 |
| CA |
N |
HN2 |
109.4 |
110.9 |
| N |
CA |
HA |
105.7 |
109.5 |
| CA |
CB |
OG |
112.2 |
109.4 |
| CB |
CA |
C |
114.7 |
109.5 |
| CB |
CA |
HA |
105.4 |
109.5 |
| CA |
CB |
HBC1 |
108.8 |
109.5 |
| CA |
CB |
HBC2 |
108.8 |
109.5 |
| CB |
OG |
P1 |
110.6 |
123.0 |
| OG |
CB |
HBC1 |
108.8 |
109.4 |
| OG |
CB |
HBC2 |
108.8 |
109.5 |
| CA |
C |
O |
119.1 |
120.0 |
| CA |
C |
OXT |
119.2 |
120.0 |
| C |
CA |
HA |
105.0 |
109.4 |
| O |
C |
OXT |
121.7 |
120.0 |
| OG |
P1 |
O2 |
111.3 |
109.4 |
| OG |
P1 |
O1 |
108.5 |
109.5 |
| OG |
P1 |
C1 |
91.9 |
109.5 |
| O2 |
P1 |
O1 |
118.0 |
109.5 |
| O2 |
P1 |
C1 |
112.6 |
109.5 |
| O1 |
P1 |
C1 |
111.4 |
109.5 |
| P1 |
O1 |
H1 |
109.5 |
114.0 |
| P1 |
C1 |
H1C1 |
109.5 |
109.5 |
| P1 |
C1 |
H1C2 |
109.5 |
109.5 |
| P1 |
C1 |
H1C3 |
109.5 |
109.5 |
| C |
OXT |
HOT |
109.5 |
117.0 |
| HN1 |
N |
HN2 |
109.5 |
111.1 |
| HBC1 |
CB |
HBC2 |
109.5 |
109.5 |
| H1C1 |
C1 |
H1C2 |
109.5 |
109.5 |
| H1C1 |
C1 |
H1C3 |
109.5 |
109.5 |
| H1C2 |
C1 |
H1C3 |
109.5 |
109.5 |
Torsion Angles for SBG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
CB |
OG |
196.5 |
295.0 |
| CB |
CA |
N |
C |
228.5 |
240.0 |
| CB |
CA |
N |
HA |
113.9 |
120.1 |
| N |
CA |
CB |
HBC1 |
316.9 |
54.9 |
| N |
CA |
CB |
HBC2 |
76.0 |
175.0 |
| N |
CA |
C |
O |
66.6 |
339.9 |
| N |
CA |
C |
OXT |
247.2 |
160.0 |
| C |
CA |
N |
HA |
245.4 |
240.1 |
| HN1 |
N |
CA |
HN2 |
240.0 |
236.0 |
| N |
CA |
CB |
C |
131.0 |
120.0 |
| CB |
CA |
N |
HN1 |
180.0 |
300.0 |
| CB |
CA |
N |
HN2 |
300.0 |
64.0 |
| N |
CA |
CB |
HA |
245.9 |
239.9 |
| CA |
CB |
OG |
P1 |
218.8 |
180.0 |
| OG |
CB |
CA |
HBC1 |
239.6 |
240.0 |
| OG |
CB |
CA |
HBC2 |
120.4 |
120.0 |
| CB |
CA |
C |
O |
196.4 |
100.0 |
| CB |
CA |
C |
OXT |
17.0 |
280.0 |
| C |
CA |
CB |
HA |
114.9 |
119.9 |
| HBC1 |
CB |
CA |
HBC2 |
240.8 |
239.9 |
| OG |
CB |
CA |
C |
65.5 |
175.0 |
| OG |
CB |
CA |
HA |
310.6 |
55.0 |
| CA |
CB |
OG |
HBC1 |
120.4 |
120.0 |
| CA |
CB |
OG |
HBC2 |
239.6 |
240.0 |
| CB |
OG |
P1 |
O2 |
285.5 |
305.0 |
| CB |
OG |
P1 |
O1 |
56.9 |
65.0 |
| CB |
OG |
P1 |
C1 |
170.3 |
185.0 |
| HBC1 |
CB |
OG |
HBC2 |
119.2 |
120.0 |
| N |
CA |
C |
CB |
230.2 |
240.0 |
| C |
CA |
N |
HN1 |
311.5 |
60.0 |
| C |
CA |
N |
HN2 |
71.5 |
184.0 |
| N |
CA |
C |
HA |
115.1 |
120.0 |
| C |
CA |
CB |
OG |
65.5 |
175.0 |
| CB |
CA |
C |
HA |
244.9 |
240.0 |
| C |
CA |
CB |
HBC1 |
185.9 |
294.9 |
| C |
CA |
CB |
HBC2 |
305.0 |
55.0 |
| O |
C |
CA |
OXT |
179.4 |
179.9 |
| CA |
C |
OXT |
HOT |
179.4 |
180.0 |
| CA |
C |
O |
OXT |
180.7 |
180.1 |
| O |
C |
CA |
HA |
311.5 |
220.0 |
| O |
C |
OXT |
HOT |
0.0 |
0.1 |
| P1 |
OG |
CB |
HBC1 |
98.4 |
60.0 |
| P1 |
OG |
CB |
HBC2 |
339.2 |
300.0 |
| O2 |
P1 |
OG |
O1 |
228.6 |
240.0 |
| O2 |
P1 |
OG |
C1 |
115.2 |
120.0 |
| O1 |
P1 |
OG |
C1 |
246.6 |
240.0 |
| OG |
P1 |
O1 |
H1 |
232.2 |
180.1 |
| OG |
P1 |
C1 |
H1C1 |
180.0 |
60.0 |
| OG |
P1 |
C1 |
H1C2 |
300.0 |
180.0 |
| OG |
P1 |
C1 |
H1C3 |
60.0 |
300.0 |
| OG |
P1 |
O2 |
O1 |
126.4 |
120.0 |
| OG |
P1 |
O2 |
C1 |
258.4 |
240.0 |
| O1 |
P1 |
O2 |
C1 |
132.0 |
120.1 |
| O2 |
P1 |
O1 |
H1 |
360.0 |
300.0 |
| O2 |
P1 |
C1 |
H1C1 |
65.9 |
300.0 |
| O2 |
P1 |
C1 |
H1C2 |
185.9 |
60.0 |
| O2 |
P1 |
C1 |
H1C3 |
305.9 |
180.0 |
| OG |
P1 |
O1 |
O2 |
232.3 |
240.0 |
| OG |
P1 |
O1 |
C1 |
99.7 |
120.0 |
| O2 |
P1 |
O1 |
C1 |
227.5 |
240.0 |
| O1 |
P1 |
C1 |
H1C1 |
290.8 |
180.0 |
| O1 |
P1 |
C1 |
H1C2 |
50.8 |
300.0 |
| O1 |
P1 |
C1 |
H1C3 |
170.8 |
60.0 |
| OG |
P1 |
C1 |
O2 |
114.1 |
120.0 |
| OG |
P1 |
C1 |
O1 |
249.2 |
240.0 |
| O2 |
P1 |
C1 |
O1 |
135.2 |
120.1 |
| C1 |
P1 |
O1 |
H1 |
132.5 |
60.0 |
| H1C1 |
C1 |
P1 |
H1C2 |
240.0 |
240.0 |
| H1C1 |
C1 |
P1 |
H1C3 |
120.0 |
120.0 |
| H1C2 |
C1 |
P1 |
H1C3 |
240.0 |
240.0 |
| CA |
C |
OXT |
O |
179.3 |
179.9 |
| OXT |
C |
CA |
HA |
132.1 |
40.1 |
| HN1 |
N |
CA |
CB |
180.0 |
300.0 |
| HN1 |
N |
CA |
C |
311.5 |
60.0 |
| CA |
N |
HN1 |
HN2 |
120.0 |
123.9 |
| HN1 |
N |
CA |
HA |
66.1 |
179.9 |
| HN2 |
N |
CA |
CB |
300.0 |
64.0 |
| HN2 |
N |
CA |
C |
71.5 |
184.0 |
| CA |
N |
HN2 |
HN1 |
240.0 |
236.1 |
| HN2 |
N |
CA |
HA |
186.1 |
303.9 |
| N |
CA |
HA |
CB |
118.0 |
120.1 |
| N |
CA |
HA |
C |
239.4 |
240.1 |
| HA |
CA |
N |
HN1 |
66.1 |
179.9 |
| HA |
CA |
N |
HN2 |
186.1 |
303.9 |
| HA |
CA |
CB |
OG |
310.6 |
55.0 |
| CB |
CA |
HA |
C |
121.5 |
120.0 |
| HA |
CA |
CB |
HBC1 |
71.0 |
175.0 |
| HA |
CA |
CB |
HBC2 |
190.1 |
295.1 |
| HA |
CA |
C |
O |
311.5 |
220.0 |
| HA |
CA |
C |
OXT |
132.1 |
40.1 |
| CA |
CB |
HBC1 |
OG |
237.5 |
240.0 |
| HBC1 |
CB |
CA |
C |
185.9 |
294.9 |
| HBC1 |
CB |
CA |
HA |
71.0 |
175.0 |
| CA |
CB |
HBC1 |
HBC2 |
118.7 |
120.0 |
| HBC1 |
CB |
OG |
P1 |
98.4 |
60.0 |
| OG |
CB |
HBC1 |
HBC2 |
241.2 |
240.0 |
| CA |
CB |
HBC2 |
OG |
122.5 |
119.9 |
| HBC2 |
CB |
CA |
C |
305.0 |
55.0 |
| HBC2 |
CB |
CA |
HA |
190.1 |
295.1 |
| CA |
CB |
HBC2 |
HBC1 |
241.3 |
239.9 |
| HBC2 |
CB |
OG |
P1 |
339.2 |
300.0 |
| OG |
CB |
HBC2 |
HBC1 |
118.7 |
120.0 |
| H1 |
O1 |
P1 |
C1 |
132.5 |
60.0 |
| P1 |
C1 |
H1C1 |
H1C2 |
120.0 |
120.0 |
| P1 |
C1 |
H1C1 |
H1C3 |
240.0 |
240.0 |
| H1C2 |
C1 |
H1C1 |
H1C3 |
120.0 |
120.0 |
| P1 |
C1 |
H1C2 |
H1C1 |
240.0 |
240.0 |
| P1 |
C1 |
H1C2 |
H1C3 |
120.0 |
120.0 |
| H1C1 |
C1 |
H1C2 |
H1C3 |
240.0 |
240.0 |
| P1 |
C1 |
H1C3 |
H1C1 |
120.0 |
120.0 |
| P1 |
C1 |
H1C3 |
H1C2 |
240.0 |
240.0 |
| H1C1 |
C1 |
H1C3 |
H1C2 |
120.0 |
120.0 |