PDB Chemical Component SBB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SBB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C01	C02	1.414	1.380
C01	C06	1.410	1.396
C01	HC1	1.103	1.080
C02	C03	1.414	1.383
C02	HC2	1.103	1.080
C03	C04	1.405	1.383
C03	S14	1.849	1.762
C04	C05	1.391	1.379
C04	HC4	1.102	1.080
C05	C06	1.382	1.395
C05	HC5	1.102	1.081
C06	C07	1.544	1.478
C07	O08	1.229	1.216
C07	N09	1.428	1.347
N09	C10	1.499	1.465
N09	HN9	1.021	0.969
C10	C11	1.566	1.529
C10	H101	1.116	1.089
C10	H102	1.116	1.090
C11	C12	1.555	1.529
C11	C25	1.550	1.507
C11	H11	1.115	1.090
C12	C13	1.541	1.529
C12	H121	1.115	1.090
C12	H122	1.116	1.091
C13	H131	1.115	1.090
C13	H132	1.115	1.090
C13	H133	1.115	1.089
S14	N15	1.667	1.655
S14	O16	1.472	1.421
S14	O17	1.449	1.421
N15	H151	1.019	0.971
N15	H152	1.021	0.969
C18	C19	1.350	1.342
C18	C20	1.464	1.465
C18	H18	1.102	1.080
C19	N21	1.385	1.367
C19	H19	1.102	1.080
C20	C22	1.407	1.406
C20	C23	1.408	1.396
N21	C22	1.383	1.377
N21	H21	1.021	0.970
C22	C24	1.407	1.391
C23	C25	1.422	1.367
C23	H23	1.102	1.079
C24	C26	1.422	1.378
C24	H24	1.104	1.080
C25	C26	1.431	1.387
C26	H26	1.103	1.080

Bond Angles for SBB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C02	C01	C06	123.4	119.8
C02	C01	HC1	118.5	120.1
C01	C02	C03	119.5	120.1
C01	C02	HC2	120.3	119.9
C06	C01	HC1	118.2	120.1
C01	C06	C05	116.2	119.7
C01	C06	C07	122.5	120.2
C03	C02	HC2	120.2	120.0
C02	C03	C04	116.1	120.3
C02	C03	S14	121.6	119.8
C04	C03	S14	122.3	119.9
C03	C04	C05	123.6	120.1
C03	C04	HC4	118.7	119.9
C03	S14	N15	108.6	107.4
C03	S14	O16	110.2	105.7
C03	S14	O17	104.0	105.8
C05	C04	HC4	117.7	119.9
C04	C05	C06	121.3	119.9
C04	C05	HC5	119.7	120.1
C06	C05	HC5	119.0	120.0
C05	C06	C07	121.3	120.1
C06	C07	O08	117.0	120.0
C06	C07	N09	121.5	120.0
O08	C07	N09	121.5	120.0
C07	N09	C10	132.6	120.0
C07	N09	HN9	110.6	120.0
C10	N09	HN9	116.9	120.0
N09	C10	C11	127.5	109.4
N09	C10	H101	105.9	109.5
N09	C10	H102	105.9	109.4
C11	C10	H101	105.9	109.5
C11	C10	H102	106.0	109.5
C10	C11	C12	111.7	109.5
C10	C11	C25	115.6	109.5
C10	C11	H11	103.7	109.5
H101	C10	H102	103.4	109.4
C12	C11	C25	110.3	109.5
C12	C11	H11	109.8	109.5
C11	C12	C13	112.8	109.5
C11	C12	H121	111.0	109.5
C11	C12	H122	111.0	109.5
C25	C11	H11	105.4	109.4
C11	C25	C23	120.6	119.8
C11	C25	C26	122.3	119.7
C13	C12	H121	111.0	109.5
C13	C12	H122	111.0	109.5
C12	C13	H131	112.8	109.5
C12	C13	H132	111.0	109.5
C12	C13	H133	110.9	109.5
H121	C12	H122	99.3	109.4
H131	C13	H132	111.0	109.5
H131	C13	H133	111.0	109.4
H132	C13	H133	99.4	109.5
N15	S14	O16	108.3	105.8
N15	S14	O17	106.3	105.8
S14	N15	H151	108.6	120.0
S14	N15	H152	112.5	120.0
O16	S14	O17	119.0	125.3
H151	N15	H152	112.6	120.0
C19	C18	C20	107.3	107.0
C19	C18	H18	123.2	126.5
C18	C19	N21	109.0	109.9
C18	C19	H19	124.5	125.0
C20	C18	H18	129.5	126.5
C18	C20	C22	106.8	106.0
C18	C20	C23	131.8	134.0
N21	C19	H19	126.5	125.0
C19	N21	C22	110.3	109.9
C19	N21	H21	124.9	125.1
C22	C20	C23	121.4	120.0
C20	C22	N21	106.6	107.2
C20	C22	C24	120.7	119.3
C20	C23	C25	120.1	119.8
C20	C23	H23	119.5	120.1
C22	N21	H21	124.8	125.1
N21	C22	C24	132.7	133.5
C22	C24	C26	117.5	119.8
C22	C24	H24	120.8	120.1
C25	C23	H23	120.4	120.1
C23	C25	C26	117.1	120.5
C26	C24	H24	121.8	120.1
C24	C26	C25	123.2	120.7
C24	C26	H26	118.1	119.6
C25	C26	H26	118.7	119.7

Torsion Angles for SBB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C06	C01	C02	HC1	180.0	180.0
C02	C01	C06	C05	0.0	0.3
C02	C01	C06	C07	180.5	180.0
C03	C02	C01	HC2	180.0	180.0
C01	C02	C03	C04	359.8	0.0
C01	C02	C03	S14	179.5	180.0
C02	C01	C06	HC1	180.0	180.0
C06	C01	C02	C03	0.1	360.0
C06	C01	C02	HC2	180.1	180.0
C04	C05	C06	C01	359.9	359.5
C01	C06	C05	HC5	179.9	179.9
C05	C06	C01	C07	179.5	180.3
C01	C06	C07	O08	172.4	360.0
C01	C06	C07	N09	353.6	180.0
C02	C01	HC1	C06	180.0	180.0
HC1	C01	C02	C03	180.1	180.0
HC1	C01	C02	HC2	0.1	0.0
HC1	C01	C06	C05	180.0	180.2
HC1	C01	C06	C07	0.5	360.0
C03	C02	C01	C06	0.1	360.0
C03	C02	C01	HC1	180.1	180.0
C01	C02	C03	HC2	180.0	180.0
C04	C03	C02	S14	180.4	180.1
C02	C03	C04	C05	0.1	359.7
C02	C03	C04	HC4	180.1	179.9
C02	C03	S14	N15	312.8	90.1
C02	C03	S14	O16	194.3	202.7
C02	C03	S14	O17	65.6	337.4
HC2	C02	C01	C06	180.1	180.0
HC2	C02	C01	HC1	0.1	0.0
C01	C02	HC2	C03	180.0	180.0
HC2	C02	C03	C04	179.9	180.0
HC2	C02	C03	S14	359.5	359.9
C04	C03	C02	HC2	179.9	180.0
C02	C03	C04	S14	179.6	179.9
C04	C03	S14	N15	132.4	270.0
C04	C03	S14	O16	13.9	22.6
C04	C03	S14	O17	245.2	157.4
C05	C04	C03	HC4	180.1	179.8
C03	C04	C05	C06	0.0	0.5
C03	C04	C05	HC5	180.0	180.1
S14	C03	C02	HC2	359.5	359.9
C02	C03	S14	C04	180.4	180.1
S14	C03	C04	C05	180.5	179.8
S14	C03	C04	HC4	0.4	0.0
N15	S14	C03	O16	118.5	247.4
N15	S14	C03	O17	247.1	112.6
C03	S14	N15	H151	180.0	180.0
C03	S14	N15	H152	54.7	360.0
O16	S14	C03	O17	128.6	225.2
C01	C06	C05	C04	359.9	359.5
C05	C04	C03	S14	180.5	179.8
C03	C04	C05	HC4	179.9	180.2
C06	C05	C04	HC5	180.0	180.4
C04	C05	C06	C07	179.4	179.8
HC4	C04	C03	S14	0.4	0.0
C03	C04	HC4	C05	180.0	179.8
HC4	C04	C05	C06	180.1	180.3
HC4	C04	C05	HC5	0.1	359.9
C05	C06	C01	HC1	180.0	180.2
C01	C06	C05	C07	180.5	179.7
C06	C05	C04	HC4	180.1	180.3
C04	C05	C06	HC5	180.0	179.6
C05	C06	C07	O08	353.0	179.7
C05	C06	C07	N09	174.1	359.8
HC5	C05	C04	HC4	0.1	359.9
C04	C05	HC5	C06	180.0	180.4
HC5	C05	C06	C07	359.4	0.2
C07	C06	C01	HC1	0.5	360.0
C01	C06	C07	C05	179.5	180.3
C07	C06	C05	HC5	359.4	0.2
O08	C07	C06	N09	178.8	179.9
C06	C07	N09	C10	178.7	180.0
C06	C07	N09	HN9	358.8	360.0
C06	C07	O08	N09	181.2	180.1
O08	C07	N09	C10	359.9	0.1
O08	C07	N09	HN9	180.0	180.0
C06	C07	N09	O08	178.8	179.9
C10	N09	C07	HN9	179.9	180.0
C07	N09	C10	C11	42.6	180.0
C07	N09	C10	H101	167.9	59.9
C07	N09	C10	H102	277.2	299.9
C07	N09	C10	HN9	180.1	180.0
C11	C10	N09	H101	234.7	120.1
C11	C10	N09	H102	125.3	240.1
N09	C10	C11	C12	133.4	60.0
N09	C10	C11	C25	260.6	180.0
N09	C10	C11	H11	15.3	299.9
H101	C10	N09	H102	250.6	120.0
C07	N09	HN9	C10	180.0	180.0
HN9	N09	C10	C11	222.5	0.0
HN9	N09	C10	H101	347.8	240.0
HN9	N09	C10	H102	97.2	120.0
C11	C10	N09	HN9	222.5	0.0
N09	C10	C11	H101	125.3	239.9
N09	C10	C11	H102	234.7	119.9
H101	C10	C11	H102	109.4	240.0
C12	C11	C10	C25	232.9	240.0
C12	C11	C10	H11	118.1	120.0
C10	C11	C12	C13	201.2	180.0
C10	C11	C12	H121	326.5	60.0
C10	C11	C12	H122	76.0	300.0
C25	C11	C10	H11	245.3	240.1
C10	C11	C25	C23	128.2	119.7
C10	C11	C25	C26	308.0	299.9
H101	C10	N09	HN9	347.8	240.0
N09	C10	H101	C11	222.3	120.0
N09	C10	H101	H102	111.1	240.0
C11	C10	H101	H102	248.8	120.0
H101	C10	C11	C12	8.1	180.0
H101	C10	C11	C25	135.3	300.1
H101	C10	C11	H11	250.0	60.0
H102	C10	N09	HN9	97.2	120.0
N09	C10	H102	C11	137.7	240.1
N09	C10	H102	H101	248.8	120.0
C11	C10	H102	H101	111.2	240.0
H102	C10	C11	C12	258.7	300.0
H102	C10	C11	C25	25.9	60.1
H102	C10	C11	H11	140.6	180.0
C12	C11	C10	H101	8.1	180.0
C12	C11	C10	H102	258.7	300.0
C10	C11	C12	C25	130.0	120.0
C10	C11	C12	H11	245.6	240.0
C25	C11	C12	H11	115.6	120.0
C12	C11	C25	C23	256.1	239.8
C12	C11	C25	C26	75.9	60.0
C13	C12	C11	H121	234.7	120.0
C13	C12	C11	H122	125.3	240.0
C11	C12	C13	H131	180.0	180.0
C11	C12	C13	H132	305.2	300.0
C11	C12	C13	H133	54.7	60.0
H121	C12	C11	H122	250.6	120.0
C25	C11	C10	H101	135.3	300.1
C25	C11	C10	H102	25.9	60.1
C10	C11	C25	C12	232.1	239.9
C10	C11	C25	H11	113.8	120.0
C12	C11	C25	H11	241.6	240.0
C25	C11	C12	C13	71.3	60.0
C25	C11	C12	H121	196.6	300.0
C25	C11	C12	H122	306.0	180.0
C20	C23	C25	C11	179.9	179.8
C11	C25	C23	H23	359.9	359.9
C23	C25	C11	C26	180.2	179.8
C24	C26	C25	C11	180.1	180.0
C11	C25	C26	H26	0.1	0.0
H11	C11	C10	H101	250.0	60.0
H11	C11	C10	H102	140.6	180.0
C10	C11	H11	C12	119.5	120.1
C10	C11	H11	C25	238.2	240.0
C12	C11	H11	C25	118.7	120.0
H11	C11	C12	C13	315.6	300.0
H11	C11	C12	H121	80.9	180.0
H11	C11	C12	H122	190.4	60.0
H11	C11	C25	C23	14.4	359.8
H11	C11	C25	C26	194.3	180.0
C13	C12	C11	C25	71.3	60.0
C13	C12	C11	H11	315.6	300.0
C11	C12	C13	H121	125.3	240.0
C11	C12	C13	H122	234.7	120.0
H121	C12	C13	H122	109.4	240.0
H131	C13	C12	H132	234.8	240.0
H131	C13	C12	H133	125.3	119.9
H132	C13	C12	H133	250.5	240.0
H121	C12	C11	C25	196.6	300.0
H121	C12	C11	H11	80.9	180.0
C11	C12	H121	C13	233.7	120.0
C11	C12	H121	H122	116.9	240.0
C13	C12	H121	H122	243.2	120.0
H121	C12	C13	H131	54.7	300.0
H121	C12	C13	H132	179.9	60.0
H121	C12	C13	H133	289.4	180.1
H122	C12	C11	C25	306.0	180.0
H122	C12	C11	H11	190.4	60.0
C11	C12	H122	C13	126.3	240.0
C11	C12	H122	H121	243.1	120.0
C13	C12	H122	H121	116.9	240.0
H122	C12	C13	H131	305.3	60.0
H122	C12	C13	H132	70.5	180.0
H122	C12	C13	H133	180.0	300.0
H131	C13	C12	H121	54.7	300.0
H131	C13	C12	H122	305.3	60.0
C12	C13	H131	H132	125.2	120.0
C12	C13	H131	H133	234.8	240.0
H132	C13	H131	H133	109.6	119.9
H132	C13	C12	H121	179.9	60.0
H132	C13	C12	H122	70.5	180.0
C12	C13	H132	H131	233.8	240.0
C12	C13	H132	H133	116.8	120.1
H131	C13	H132	H133	243.1	240.1
H133	C13	C12	H121	289.4	180.1
H133	C13	C12	H122	180.0	300.0
C12	C13	H133	H131	126.2	120.0
C12	C13	H133	H132	243.1	240.0
H131	C13	H133	H132	116.9	119.9
C03	S14	N15	O16	240.3	112.6
C03	S14	N15	O17	111.4	247.3
O16	S14	N15	O17	231.1	134.8
H151	N15	S14	H152	125.3	180.0
C03	S14	O16	N15	118.6	246.3
C03	S14	O16	O17	240.0	123.2
N15	S14	O16	O17	121.4	236.9
O16	S14	N15	H151	299.7	67.4
O16	S14	N15	H152	174.4	247.4
C03	S14	O17	N15	245.5	113.8
C03	S14	O17	O16	123.1	236.9
N15	S14	O17	O16	237.6	123.1
O17	S14	N15	H151	68.7	292.7
O17	S14	N15	H152	303.3	112.6
H151	N15	S14	O16	299.7	67.4
H151	N15	S14	O17	68.7	292.7
S14	N15	H151	H152	234.7	180.0
H152	N15	S14	O16	174.4	247.4
H152	N15	S14	O17	303.3	112.6
S14	N15	H152	H151	123.1	180.0
C20	C18	C19	H18	180.0	180.0
C19	C18	C20	C22	0.1	0.0
C19	C18	C20	C23	180.0	180.2
N21	C19	C18	H19	180.0	180.0
C18	C19	N21	C22	359.9	360.0
C18	C19	N21	H21	179.9	179.9
C19	C18	C20	H18	180.0	180.0
C20	C18	C19	N21	359.9	0.0
C20	C18	C19	H19	179.9	180.0
C22	C20	C18	C23	180.1	179.8
C18	C20	C22	N21	359.8	360.0
C18	C20	C22	C24	180.0	180.0
C18	C20	C23	C25	180.1	180.2
C18	C20	C23	H23	0.1	0.1
C19	C18	H18	C20	180.0	180.1
H18	C18	C19	N21	180.0	180.0
H18	C18	C19	H19	359.9	360.0
H18	C18	C20	C22	180.1	180.1
H18	C18	C20	C23	360.0	0.2
N21	C19	C18	C20	359.9	0.0
N21	C19	C18	H18	180.0	180.0
C18	C19	N21	H19	180.0	180.0
C20	C22	N21	C19	0.2	0.0
C22	N21	C19	H21	180.0	180.1
C19	N21	C22	C24	179.9	180.0
H19	C19	C18	C20	179.9	180.0
H19	C19	C18	H18	359.9	360.0
C18	C19	H19	N21	180.0	180.0
H19	C19	N21	C22	179.9	179.9
H19	C19	N21	H21	359.9	359.9
C22	C20	C18	H18	180.1	180.1
C18	C20	C22	C23	179.9	180.2
C19	N21	C22	C20	0.2	0.0
C22	C20	C23	C25	359.9	0.4
C22	C20	C23	H23	179.9	180.3
C20	C22	N21	H21	180.2	180.1
N21	C22	C20	C24	179.8	180.0
C20	C22	C24	C26	359.9	359.9
C20	C22	C24	H24	179.8	180.0
C11	C25	C23	C20	179.9	179.8
C23	C20	C18	H18	360.0	0.2
C18	C20	C23	C22	180.2	179.8
C23	C20	C22	N21	179.9	179.8
C23	C20	C22	C24	0.1	359.9
C25	C23	C20	H23	180.0	180.1
C20	C23	C25	C26	0.0	359.6
C22	N21	C19	H19	179.9	179.9
C19	N21	C22	H21	180.0	179.9
N21	C22	C20	C23	179.9	179.8
C20	C22	N21	C24	180.2	180.0
N21	C22	C24	C26	180.1	180.0
N21	C22	C24	H24	0.1	0.1
H21	N21	C19	H19	359.9	359.9
C19	N21	H21	C22	180.0	180.1
H21	N21	C22	C24	360.0	0.0
C24	C22	C20	C23	0.1	359.9
C20	C22	C24	N21	179.8	179.9
C24	C22	N21	H21	360.0	0.0
C26	C24	C22	H24	180.0	179.9
C22	C24	C26	C25	0.1	0.1
C22	C24	C26	H26	180.1	180.0
C23	C25	C11	H11	14.4	359.8
C11	C25	C23	C26	179.8	180.2
C20	C23	C25	H23	180.0	179.9
C24	C26	C25	C23	360.0	0.2
C23	C25	C26	H26	180.0	180.3
C20	C23	H23	C25	180.0	180.1
H23	C23	C25	C26	180.0	179.7
C11	C25	C26	C24	180.1	180.0
C22	C24	C26	H24	180.0	180.1
C23	C25	C26	C24	360.0	0.2
C25	C26	C24	H26	180.0	180.1
C22	C24	H24	C26	180.0	179.9
H24	C24	C26	C25	180.1	180.0
H24	C24	C26	H26	0.1	359.9
C26	C25	C11	H11	194.3	180.0
C11	C25	C26	C23	180.2	179.8
C26	C25	C23	H23	180.0	179.7
C25	C26	C24	H24	180.1	180.0
C24	C26	C25	H26	180.0	179.9
H26	C26	C24	H24	0.1	359.9
C24	C26	H26	C25	180.0	180.1