PDB Chemical Component SB2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SB2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O2 S1 1.608 1.422
C1 S1 1.828 1.814
C1 H11 1.115 1.091
C1 H12 1.115 1.090
C1 H13 1.115 1.090
S1 CA3 1.765 1.762
CA1 CA2 1.415 1.380
CA1 CA6 1.449 1.396
CA1 HA1 1.102 1.079
CA2 CA3 1.422 1.383
CA2 HA2 1.103 1.080
CA3 CA4 1.420 1.384
CA4 CA5 1.410 1.380
CA4 HA4 1.103 1.081
CA5 CA6 1.454 1.396
CA5 HA5 1.102 1.079
CA6 CC2 1.437 1.478
NB1 CB2 1.355 1.320
NB1 CB6 1.354 1.320
CB2 CB3 1.434 1.379
CB2 HB2 1.104 1.080
CB3 CB4 1.453 1.402
CB3 HB3 1.104 1.080
CB4 CB5 1.468 1.401
CB4 CC5 1.473 1.475
CB5 CB6 1.421 1.378
CB5 HB5 1.102 1.080
CB6 HB6 1.103 1.080
NC1 CC2 1.394 1.363
NC1 CC5 1.412 1.377
NC1 HN1 1.021 0.970
CC2 NC3 1.374 1.314
NC3 CC4 1.397 1.342
CC4 CC5 1.486 1.386
CC4 CD6 1.414 1.482
CD1 CD2 1.403 1.380
CD1 CD6 1.433 1.394
CD1 HD1 1.103 1.080
CD2 CD3 1.417 1.385
CD2 HD2 1.103 1.080
CD3 CD4 1.434 1.386
CD3 FD3 1.371 1.351
CD4 CD5 1.417 1.380
CD4 HD4 1.103 1.080
CD5 CD6 1.446 1.394
CD5 HD5 1.103 1.079

Bond Angles for SB2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 S1 C1 112.4 109.5
O2 S1 CA3 114.3 103.0
S1 C1 H11 112.3 109.5
S1 C1 H12 111.1 109.5
S1 C1 H13 111.1 109.5
C1 S1 CA3 109.4 103.0
H11 C1 H12 111.2 109.4
H11 C1 H13 111.2 109.5
H12 C1 H13 99.2 109.5
S1 CA3 CA2 119.3 119.9
S1 CA3 CA4 118.8 119.8
CA2 CA1 CA6 121.2 119.8
CA2 CA1 HA1 118.2 120.1
CA1 CA2 CA3 119.2 120.2
CA1 CA2 HA2 120.2 119.9
CA6 CA1 HA1 120.6 120.1
CA1 CA6 CA5 117.2 119.7
CA1 CA6 CC2 121.7 120.1
CA3 CA2 HA2 120.7 119.9
CA2 CA3 CA4 121.8 120.3
CA3 CA4 CA5 118.8 120.2
CA3 CA4 HA4 121.0 119.9
CA5 CA4 HA4 120.2 119.9
CA4 CA5 CA6 121.8 119.8
CA4 CA5 HA5 117.5 120.1
CA6 CA5 HA5 120.7 120.1
CA5 CA6 CC2 121.0 120.1
CA6 CC2 NC1 122.7 125.4
CA6 CC2 NC3 120.8 125.4
CB2 NB1 CB6 122.8 122.1
NB1 CB2 CB3 120.9 120.9
NB1 CB2 HB2 116.7 119.6
NB1 CB6 CB5 120.7 120.9
NB1 CB6 HB6 117.2 119.5
CB3 CB2 HB2 122.4 119.5
CB2 CB3 CB4 119.2 118.9
CB2 CB3 HB3 119.8 120.5
CB4 CB3 HB3 121.1 120.5
CB3 CB4 CB5 116.8 118.2
CB3 CB4 CC5 122.7 120.9
CB5 CB4 CC5 120.5 120.9
CB4 CB5 CB6 119.6 119.0
CB4 CB5 HB5 121.8 120.5
CB4 CC5 NC1 121.7 126.8
CB4 CC5 CC4 131.5 126.8
CB6 CB5 HB5 118.6 120.5
CB5 CB6 HB6 122.1 119.5
CC2 NC1 CC5 103.9 107.2
CC2 NC1 HN1 127.7 126.4
NC1 CC2 NC3 116.5 109.2
CC5 NC1 HN1 128.5 126.4
NC1 CC5 CC4 106.8 106.3
CC2 NC3 CC4 103.6 109.5
NC3 CC4 CC5 109.2 107.8
NC3 CC4 CD6 119.2 126.1
CC5 CC4 CD6 131.4 126.1
CC4 CD6 CD1 118.2 120.1
CC4 CD6 CD5 123.1 120.1
CD2 CD1 CD6 121.0 119.9
CD2 CD1 HD1 118.5 120.0
CD1 CD2 CD3 120.0 120.1
CD1 CD2 HD2 119.5 119.9
CD6 CD1 HD1 120.5 120.1
CD1 CD6 CD5 118.7 119.8
CD3 CD2 HD2 120.5 119.9
CD2 CD3 CD4 120.5 120.2
CD2 CD3 FD3 118.5 119.9
CD4 CD3 FD3 120.9 119.9
CD3 CD4 CD5 119.6 120.1
CD3 CD4 HD4 120.8 119.9
CD5 CD4 HD4 119.7 120.0
CD4 CD5 CD6 120.2 119.9
CD4 CD5 HD5 118.9 120.0
CD6 CD5 HD5 120.9 120.1

Torsion Angles for SB2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 S1 C1 H11 180.0 49.1
O2 S1 C1 H12 305.3 169.0
O2 S1 C1 H13 54.7 289.0
C1 S1 O2 CA3 234.6 251.0
O2 S1 CA3 CA2 24.0 336.2
O2 S1 CA3 CA4 204.1 156.1
O2 S1 C1 CA3 128.0 109.0
H11 C1 S1 H12 234.7 240.0
H11 C1 S1 H13 125.3 120.0
H12 C1 S1 H13 250.5 240.0
C1 S1 CA3 CA2 151.0 90.0
C1 S1 CA3 CA4 331.0 270.0
S1 C1 H11 H12 125.2 120.0
S1 C1 H11 H13 234.8 240.0
H11 C1 S1 CA3 52.0 300.0
H12 C1 H11 H13 109.6 120.0
S1 C1 H12 H11 234.1 240.0
S1 C1 H12 H13 117.0 120.0
H12 C1 S1 CA3 177.2 60.0
H11 C1 H12 H13 242.9 240.0
S1 C1 H13 H11 125.9 120.0
S1 C1 H13 H12 243.0 240.0
H13 C1 S1 CA3 286.7 180.0
H11 C1 H13 H12 117.2 120.0
O2 S1 CA3 C1 233.1 246.2
CA3 S1 C1 H11 52.0 300.0
CA3 S1 C1 H12 177.2 60.0
CA3 S1 C1 H13 286.7 180.0
CA1 CA2 CA3 S1 180.7 180.0
S1 CA3 CA2 HA2 0.7 359.9
CA2 CA3 S1 CA4 179.9 180.1
S1 CA3 CA4 CA5 179.5 180.0
S1 CA3 CA4 HA4 359.4 0.0
S1 CA3 CA2 CA1 180.7 180.0
CA6 CA1 CA2 HA1 180.0 180.1
CA2 CA1 CA6 CA5 0.3 0.0
CA2 CA1 CA6 CC2 178.9 180.1
CA3 CA2 CA1 HA2 180.0 179.9
CA1 CA2 CA3 CA4 0.6 0.1
CA2 CA1 CA6 HA1 180.0 179.9
CA6 CA1 CA2 CA3 359.5 359.9
CA6 CA1 CA2 HA2 179.5 180.0
CA4 CA5 CA6 CA1 359.9 0.0
CA1 CA6 CA5 HA5 179.9 180.0
CA5 CA6 CA1 CC2 181.4 180.0
CA1 CA6 CC2 NC1 0.2 180.0
CA1 CA6 CC2 NC3 180.6 360.0
CA2 CA1 HA1 CA6 180.0 180.1
HA1 CA1 CA2 CA3 179.5 179.8
HA1 CA1 CA2 HA2 359.5 359.9
HA1 CA1 CA6 CA5 180.2 180.2
HA1 CA1 CA6 CC2 358.8 0.2
S1 CA3 CA2 CA4 180.1 179.9
CA3 CA2 CA1 CA6 359.5 359.9
CA3 CA2 CA1 HA1 179.5 179.8
CA1 CA2 CA3 HA2 180.0 180.1
CA2 CA3 CA4 CA5 359.5 359.9
CA2 CA3 CA4 HA4 179.5 179.9
HA2 CA2 CA1 CA6 179.5 180.0
HA2 CA2 CA1 HA1 359.5 359.9
CA1 CA2 HA2 CA3 180.1 179.9
HA2 CA2 CA3 CA4 180.7 180.0
S1 CA3 CA4 CA2 179.9 180.1
CA4 CA3 CA2 HA2 180.7 180.0
CA5 CA4 CA3 HA4 180.0 180.0
CA3 CA4 CA5 CA6 0.2 0.0
CA3 CA4 CA5 HA5 180.2 180.0
CA1 CA6 CA5 CA4 359.9 0.0
CA3 CA4 CA5 HA4 180.0 180.0
CA6 CA5 CA4 HA5 180.0 180.0
CA4 CA5 CA6 CC2 181.3 180.0
CA3 CA4 HA4 CA5 180.0 180.0
HA4 CA4 CA5 CA6 180.3 180.0
HA4 CA4 CA5 HA5 0.2 0.0
CA5 CA6 CA1 HA1 180.2 180.2
CA1 CA6 CA5 CC2 178.6 180.0
CA6 CA5 CA4 HA4 180.3 180.0
CA4 CA5 CA6 HA5 180.0 180.0
CA5 CA6 CC2 NC1 178.8 0.1
CA5 CA6 CC2 NC3 359.1 180.0
HA5 CA5 CA4 HA4 0.2 0.0
CA4 CA5 HA5 CA6 180.0 180.0
HA5 CA5 CA6 CC2 1.3 360.0
CC2 CA6 CA1 HA1 358.8 0.2
CA1 CA6 CC2 CA5 181.5 180.0
CC2 CA6 CA5 HA5 1.3 360.0
CA6 CC2 NC1 CC5 181.8 180.0
CA6 CC2 NC1 HN1 1.9 359.7
NC1 CC2 CA6 NC3 179.7 180.1
CA6 CC2 NC3 CC4 179.2 180.1
CB2 NB1 CB6 CB5 0.1 0.1
CB2 NB1 CB6 HB6 180.1 180.0
CB3 CB2 NB1 HB2 180.0 180.0
NB1 CB2 CB3 CB4 359.8 0.0
NB1 CB2 CB3 HB3 179.8 179.9
CB6 NB1 CB2 CB3 0.2 360.0
CB6 NB1 CB2 HB2 180.2 180.0
CB4 CB5 CB6 NB1 359.6 359.9
NB1 CB6 CB5 HB5 179.6 180.1
CB5 CB6 NB1 HB6 180.0 180.1
CB3 CB2 NB1 CB6 0.2 360.0
NB1 CB2 CB3 HB2 180.0 180.0
CB4 CB3 CB2 HB3 180.0 180.1
CB2 CB3 CB4 CB5 359.9 360.0
CB2 CB3 CB4 CC5 181.0 180.0
HB2 CB2 NB1 CB6 180.2 180.0
NB1 CB2 HB2 CB3 180.0 180.0
HB2 CB2 CB3 CB4 179.9 180.0
HB2 CB2 CB3 HB3 359.8 359.9
CB4 CB3 CB2 HB2 179.9 180.0
CB2 CB3 CB4 HB3 180.0 179.9
CB5 CB4 CB3 CC5 178.9 180.0
CB3 CB4 CB5 CB6 0.4 0.1
CB3 CB4 CB5 HB5 180.4 179.9
CB3 CB4 CC5 NC1 43.0 227.2
CB3 CB4 CC5 CC4 224.8 47.3
HB3 CB3 CB2 HB2 359.8 359.9
CB2 CB3 HB3 CB4 180.0 180.1
HB3 CB3 CB4 CB5 179.9 180.0
HB3 CB3 CB4 CC5 1.1 0.0
NB1 CB6 CB5 CB4 359.6 359.9
CB5 CB4 CB3 HB3 179.9 180.0
CB3 CB4 CB5 CC5 181.1 180.0
CB5 CB4 CC5 NC1 224.2 47.2
CB5 CB4 CC5 CC4 45.9 227.3
CB6 CB5 CB4 HB5 180.0 180.1
CB4 CB5 CB6 HB6 179.6 180.0
CC5 CB4 CB3 HB3 1.1 0.0
CB3 CB4 CC5 CB5 178.8 180.0
CC5 CB4 CB5 CB6 179.3 180.1
CC5 CB4 CB5 HB5 359.3 359.9
CC2 NC1 CC5 CB4 179.6 180.0
CB4 CC5 NC1 HN1 359.6 0.3
NC1 CC5 CB4 CC4 178.2 179.9
NC3 CC4 CC5 CB4 180.0 180.0
CB4 CC5 CC4 CD6 354.7 359.9
NB1 CB6 CB5 HB6 180.0 179.9
CB6 CB5 CB4 CC5 179.3 180.1
CB4 CB5 CB6 HB5 180.0 179.9
HB5 CB5 CB4 CC5 359.3 359.9
CB4 CB5 HB5 CB6 180.0 180.1
HB5 CB5 CB6 HB6 359.6 0.1
NB1 CB6 HB6 CB5 180.0 180.1
HB6 CB6 CB5 HB5 359.6 0.1
CA6 CC2 NC1 NC3 180.3 179.9
CB4 CC5 NC1 CC2 179.6 180.0
CC5 NC1 CC2 HN1 180.0 180.3
CC2 NC1 CC5 CC4 358.2 359.9
NC1 CC2 NC3 CC4 359.5 360.0
CB4 CC5 NC1 CC4 181.4 180.1
CC2 NC1 CC5 HN1 180.0 179.7
CC5 NC1 CC2 NC3 1.5 0.0
NC3 CC4 CC5 NC1 1.6 0.1
NC1 CC5 CC4 CD6 176.2 180.0
CC2 NC1 HN1 CC5 179.9 180.4
HN1 NC1 CC2 NC3 181.5 179.7
HN1 NC1 CC5 CC4 178.2 180.3
CA6 CC2 NC3 NC1 179.7 180.1
NC3 CC2 NC1 CC5 1.5 0.0
NC3 CC2 NC1 HN1 181.5 179.7
CC2 NC3 CC4 CC5 359.3 360.0
CC2 NC3 CC4 CD6 183.9 180.0
CB4 CC5 CC4 NC3 180.0 180.0
NC1 CC5 CC4 NC3 1.6 0.1
CC5 CC4 NC3 CD6 175.4 179.9
NC3 CC4 CD6 CD1 68.9 222.1
NC3 CC4 CD6 CD5 249.7 42.0
CB4 CC5 CC4 NC1 178.4 179.9
CC4 CC5 NC1 HN1 178.2 180.3
NC3 CC4 CC5 CD6 185.4 180.1
CC5 CC4 CD6 CD1 254.7 42.1
CC5 CC4 CD6 CD5 75.5 222.1
NC3 CC4 CD6 CC5 174.2 179.9
CD2 CD1 CD6 CC4 180.5 180.0
CC4 CD6 CD1 HD1 0.5 0.2
CD1 CD6 CC4 CD5 179.2 180.1
CD4 CD5 CD6 CC4 179.5 180.0
CC4 CD6 CD5 HD5 359.4 0.1
CC4 CD6 CD1 CD2 180.5 180.0
CD6 CD1 CD2 HD1 180.0 180.2
CD2 CD1 CD6 CD5 359.7 0.0
CD3 CD2 CD1 HD2 180.0 179.9
CD1 CD2 CD3 CD4 359.8 0.1
CD1 CD2 CD3 FD3 180.1 180.0
CC4 CD6 CD1 CD5 180.7 179.9
CD2 CD1 CD6 HD1 180.0 179.8
CD6 CD1 CD2 CD3 0.2 360.0
CD6 CD1 CD2 HD2 180.2 180.0
CD4 CD5 CD6 CD1 0.2 359.9
CD1 CD6 CD5 HD5 180.2 180.0
CD2 CD1 HD1 CD6 180.0 180.2
HD1 CD1 CD2 CD3 180.2 179.7
HD1 CD1 CD2 HD2 0.2 359.8
HD1 CD1 CD6 CD5 179.8 180.3
CD3 CD2 CD1 CD6 0.2 360.0
CD3 CD2 CD1 HD1 180.2 179.7
CD1 CD2 CD3 HD2 180.0 180.1
CD4 CD3 CD2 FD3 179.7 180.1
CD2 CD3 CD4 CD5 0.1 359.9
CD2 CD3 CD4 HD4 180.2 179.9
HD2 CD2 CD1 CD6 180.2 180.0
HD2 CD2 CD1 HD1 0.2 359.8
CD1 CD2 HD2 CD3 180.0 179.9
HD2 CD2 CD3 CD4 179.8 180.0
HD2 CD2 CD3 FD3 0.1 359.9
CD4 CD3 CD2 HD2 179.8 180.0
CD2 CD3 CD4 FD3 180.3 179.9
CD5 CD4 CD3 HD4 180.0 180.0
CD3 CD4 CD5 CD6 359.8 0.1
CD3 CD4 CD5 HD5 179.9 180.0
FD3 CD3 CD2 HD2 0.1 359.9
CD2 CD3 FD3 CD4 179.7 180.1
FD3 CD3 CD4 CD5 179.9 180.0
FD3 CD3 CD4 HD4 359.9 0.0
CC4 CD6 CD5 CD4 179.5 180.0
CD1 CD6 CD5 CD4 0.2 359.9
CD5 CD4 CD3 FD3 179.9 180.0
CD3 CD4 CD5 HD4 180.0 180.0
CD6 CD5 CD4 HD5 180.0 180.1
HD4 CD4 CD3 FD3 359.9 0.0
CD3 CD4 HD4 CD5 180.0 180.0
HD4 CD4 CD5 CD6 179.8 180.1
HD4 CD4 CD5 HD5 359.8 360.0
CC4 CD6 CD5 CD1 179.2 180.1
CD5 CD6 CD1 HD1 179.8 180.3
CD6 CD5 CD4 HD4 179.8 180.1
CD4 CD5 CD6 HD5 180.0 179.9
HD5 CD5 CD4 HD4 359.8 360.0
CD4 CD5 HD5 CD6 180.0 180.1