PDB Chemical Component SAO

Ideal Model

Chemical Description

Name 5'-S-[(3S)-3-azaniumyl-3-carboxypropyl]-5'-thioadenosine
Synonyms S-ADENOSYL-L-HOMOCYSTEINE
Formula C14 H21 N6 O5 S
Formal charge 1
Molecular weight 385.419 g/mol
Component type L-peptide linking

Chemical features

Atom count 47
Chiral atom count 5
Chiral atoms CA C4' C3' C2' C1'
Bond count 49
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-S-[(3S)-3-azaniumyl-3-carboxypropyl]-5'-thioadenosine
Systematic name (OpenEye OEToolkits) [(2~{S})-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]-1-oxidanyl-1-oxidanylidene-butan-2-yl]azanium

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CSCC[C@H]([NH3+])C(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CSCC[CH]([NH3+])C(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)[NH3+])O)O)N
InChI descriptor InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/p+1/t6-,7+,9+,10+,13+/m0/s1
InChIKey descriptor ZJUKTBDSGOFHSH-WFMPWKQPSA-O

Status Information

Last modified 2020-06-17
Created 2016-04-08
Release status REL
Model PDB code 5ISC
Processing site EBI