PDB Chemical Component SAL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SAL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1' |
O1' |
1.224 |
1.214 |
C1' |
O2' |
1.225 |
1.347 |
C1' |
C1 |
1.427 |
1.474 |
O2' |
HO2' |
0.950 |
0.967 |
C1 |
C2 |
1.420 |
1.400 |
C1 |
C6 |
1.433 |
1.398 |
C2 |
C3 |
1.429 |
1.387 |
C2 |
O2 |
1.353 |
1.356 |
C3 |
C4 |
1.404 |
1.380 |
C3 |
H3 |
1.104 |
1.079 |
C4 |
C5 |
1.416 |
1.386 |
C4 |
H4 |
1.104 |
1.080 |
C5 |
C6 |
1.436 |
1.377 |
C5 |
H5 |
1.103 |
1.081 |
C6 |
H6 |
1.103 |
1.080 |
O2 |
HO2 |
0.951 |
0.966 |
Bond Angles for SAL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1' |
C1' |
O2' |
114.6 |
119.9 |
O1' |
C1' |
C1 |
123.3 |
120.0 |
O2' |
C1' |
C1 |
122.2 |
120.0 |
C1' |
O2' |
HO2' |
114.5 |
120.0 |
C1' |
C1 |
C2 |
123.9 |
120.2 |
C1' |
C1 |
C6 |
120.0 |
120.1 |
C2 |
C1 |
C6 |
116.1 |
119.6 |
C1 |
C2 |
C3 |
123.4 |
119.7 |
C1 |
C2 |
O2 |
121.9 |
120.2 |
C1 |
C6 |
C5 |
122.2 |
119.9 |
C1 |
C6 |
H6 |
118.8 |
120.1 |
C3 |
C2 |
O2 |
114.7 |
120.1 |
C2 |
C3 |
C4 |
118.1 |
120.1 |
C2 |
C3 |
H3 |
121.8 |
120.0 |
C2 |
O2 |
HO2 |
121.9 |
106.8 |
C4 |
C3 |
H3 |
120.1 |
119.9 |
C3 |
C4 |
C5 |
121.7 |
120.4 |
C3 |
C4 |
H4 |
118.7 |
119.9 |
C5 |
C4 |
H4 |
119.5 |
119.8 |
C4 |
C5 |
C6 |
118.4 |
120.3 |
C4 |
C5 |
H5 |
120.1 |
119.8 |
C6 |
C5 |
H5 |
121.5 |
119.8 |
C5 |
C6 |
H6 |
119.0 |
120.0 |
Torsion Angles for SAL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2' |
C1' |
O1' |
C1 |
180.0 |
180.0 |
O1' |
C1' |
O2' |
HO2' |
180.0 |
359.9 |
O1' |
C1' |
C1 |
C2 |
0.2 |
359.7 |
O1' |
C1' |
C1 |
C6 |
179.9 |
180.0 |
O1' |
C1' |
O2' |
C1 |
180.0 |
180.0 |
O2' |
C1' |
C1 |
C2 |
180.3 |
179.7 |
O2' |
C1' |
C1 |
C6 |
359.9 |
360.0 |
O1' |
C1' |
C1 |
O2' |
180.0 |
180.0 |
C1 |
C1' |
O2' |
HO2' |
360.0 |
180.0 |
C2 |
C1 |
C1' |
C6 |
180.3 |
179.7 |
C1' |
C1 |
C2 |
C3 |
179.8 |
179.7 |
C1' |
C1 |
C2 |
O2 |
359.7 |
0.4 |
C1' |
C1 |
C6 |
C5 |
180.2 |
180.0 |
C1' |
C1 |
C6 |
H6 |
0.3 |
360.0 |
HO2' |
O2' |
C1' |
C1 |
360.0 |
180.0 |
C1' |
C1 |
C2 |
C6 |
179.7 |
180.3 |
C2 |
C1 |
C6 |
C5 |
359.9 |
0.3 |
C2 |
C1 |
C6 |
H6 |
180.0 |
180.3 |
C3 |
C2 |
C1 |
O2 |
180.1 |
179.3 |
C1 |
C2 |
C3 |
C4 |
359.9 |
0.7 |
C1 |
C2 |
C3 |
H3 |
179.9 |
180.3 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
269.3 |
C1' |
C1 |
C6 |
C2 |
180.3 |
179.7 |
C6 |
C1 |
C2 |
C3 |
0.1 |
359.4 |
C6 |
C1 |
C2 |
O2 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
C1 |
0.1 |
0.0 |
C1 |
C6 |
C5 |
H5 |
180.1 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
C6 |
0.1 |
359.4 |
C1 |
C2 |
C3 |
O2 |
179.9 |
180.7 |
C3 |
C2 |
O2 |
HO2 |
359.9 |
90.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.3 |
C2 |
C3 |
C4 |
C5 |
0.1 |
359.6 |
C2 |
C3 |
C4 |
H4 |
180.1 |
179.6 |
O2 |
C2 |
C1 |
C6 |
180.0 |
180.1 |
C1 |
C2 |
O2 |
C3 |
180.1 |
179.3 |
O2 |
C2 |
C3 |
C4 |
179.9 |
180.0 |
O2 |
C2 |
C3 |
H3 |
359.9 |
359.7 |
C4 |
C3 |
C2 |
O2 |
179.9 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.7 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.9 |
0.0 |
C3 |
C4 |
C5 |
H5 |
179.9 |
180.0 |
H3 |
C3 |
C2 |
O2 |
359.9 |
359.7 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.3 |
H3 |
C3 |
C4 |
C5 |
180.1 |
179.9 |
H3 |
C3 |
C4 |
H4 |
0.1 |
360.0 |
C1 |
C6 |
C5 |
C4 |
0.1 |
0.0 |
C5 |
C4 |
C3 |
H3 |
180.1 |
179.9 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H6 |
180.1 |
180.0 |
H4 |
C4 |
C3 |
H3 |
0.1 |
360.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
H4 |
C4 |
C5 |
H5 |
359.9 |
0.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.9 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
H4 |
359.9 |
0.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
0.0 |
0.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.0 |
0.0 |