PDB Chemical Component S8A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for S8A
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C9 |
1.371 |
1.387 |
| C1 |
C8 |
1.381 |
1.384 |
| C9 |
C5 |
1.391 |
1.367 |
| O5 |
S1 |
1.410 |
1.421 |
| C8 |
C2 |
1.380 |
1.376 |
| C5 |
S1 |
1.736 |
1.771 |
| C5 |
C3 |
1.381 |
1.401 |
| C2 |
C3 |
1.390 |
1.405 |
| S1 |
O1 |
1.419 |
1.421 |
| S1 |
N1 |
1.664 |
1.671 |
| C3 |
C7 |
1.472 |
1.469 |
| O3 |
C6 |
1.221 |
1.208 |
| N1 |
C7 |
1.390 |
1.341 |
| N1 |
C4 |
1.448 |
1.465 |
| C7 |
O4 |
1.190 |
1.216 |
| C6 |
O2 |
1.288 |
1.342 |
| C6 |
C4 |
1.489 |
1.507 |
| C2 |
H1 |
1.080 |
1.080 |
| C8 |
H2 |
1.080 |
1.081 |
| C1 |
H3 |
1.080 |
1.080 |
| C9 |
H4 |
1.080 |
1.080 |
| C4 |
H5 |
1.100 |
1.090 |
| C4 |
H6 |
1.100 |
1.090 |
| O2 |
H7 |
0.950 |
0.967 |
Bond Angles for S8A
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C9 |
C5 |
116.2 |
119.8 |
| C9 |
C1 |
H3 |
118.7 |
120.3 |
| C1 |
C9 |
H4 |
121.9 |
120.1 |
| C1 |
C8 |
H2 |
119.5 |
119.5 |
| C9 |
C5 |
S1 |
127.3 |
134.2 |
| C5 |
C9 |
H4 |
121.9 |
120.1 |
| O5 |
S1 |
N1 |
109.8 |
107.5 |
| C8 |
C2 |
H1 |
121.1 |
119.9 |
| C5 |
S1 |
O1 |
112.8 |
107.5 |
| C5 |
S1 |
N1 |
92.3 |
99.9 |
| O1 |
S1 |
N1 |
109.6 |
107.7 |
| S1 |
N1 |
C4 |
116.0 |
127.1 |
| O3 |
C6 |
O2 |
125.0 |
120.0 |
| N1 |
C4 |
H5 |
108.4 |
109.5 |
| N1 |
C4 |
H6 |
108.4 |
109.4 |
| C6 |
O2 |
H7 |
109.5 |
117.0 |
| C6 |
C4 |
H5 |
108.4 |
109.4 |
| C6 |
C4 |
H6 |
108.4 |
109.5 |
| H5 |
C4 |
H6 |
109.5 |
109.6 |
Torsion Angles for S8A
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
C1 |
C8 |
H2 |
178.4 |
180.1 |
| C1 |
C9 |
C5 |
S1 |
180.7 |
180.0 |
| C5 |
C9 |
C1 |
H4 |
180.0 |
180.0 |
| C1 |
C8 |
C2 |
H1 |
180.2 |
180.0 |
| C5 |
C9 |
C1 |
H3 |
181.1 |
180.0 |
| C1 |
C9 |
C5 |
H4 |
180.0 |
180.0 |
| C9 |
C5 |
S1 |
O1 |
295.9 |
292.1 |
| C9 |
C5 |
S1 |
N1 |
183.5 |
179.8 |
| C5 |
S1 |
O5 |
N1 |
101.8 |
106.7 |
| O1 |
S1 |
O5 |
N1 |
234.9 |
233.3 |
| O5 |
S1 |
N1 |
C4 |
288.8 |
292.0 |
| S1 |
C5 |
C9 |
H4 |
0.7 |
360.0 |
| O5 |
S1 |
C5 |
N1 |
247.2 |
248.0 |
| O1 |
S1 |
C5 |
N1 |
112.5 |
112.2 |
| C5 |
S1 |
N1 |
C4 |
172.7 |
180.0 |
| O5 |
S1 |
O1 |
N1 |
125.1 |
126.7 |
| C5 |
S1 |
O1 |
N1 |
258.7 |
253.2 |
| O1 |
S1 |
N1 |
C4 |
57.5 |
67.9 |
| C5 |
S1 |
N1 |
O1 |
115.2 |
112.1 |
| S1 |
N1 |
C4 |
H5 |
219.8 |
215.0 |
| S1 |
N1 |
C4 |
H6 |
338.5 |
335.1 |
| O3 |
C6 |
O2 |
H7 |
360.0 |
0.0 |
| O3 |
C6 |
C4 |
H5 |
269.7 |
240.0 |
| O3 |
C6 |
C4 |
H6 |
150.9 |
120.0 |
| C6 |
C4 |
N1 |
H5 |
239.4 |
240.0 |
| C6 |
C4 |
N1 |
H6 |
120.6 |
120.0 |
| H5 |
C4 |
N1 |
H6 |
241.3 |
239.9 |
| O2 |
C6 |
C4 |
H5 |
89.8 |
60.0 |
| O2 |
C6 |
C4 |
H6 |
331.1 |
299.9 |
| N1 |
C4 |
C6 |
H5 |
120.6 |
120.0 |
| N1 |
C4 |
C6 |
H6 |
239.4 |
240.1 |
| H5 |
C4 |
C6 |
H6 |
118.7 |
120.1 |
| H2 |
C8 |
C2 |
H1 |
0.2 |
0.0 |
| H3 |
C1 |
C9 |
C5 |
181.1 |
180.0 |
| H3 |
C1 |
C9 |
H4 |
1.1 |
360.0 |
| H3 |
C1 |
C8 |
H2 |
358.4 |
360.0 |
| C1 |
C9 |
H4 |
C5 |
180.0 |
180.0 |
| H4 |
C9 |
C1 |
H3 |
1.1 |
360.0 |
| H4 |
C9 |
C5 |
S1 |
0.7 |
360.0 |
| N1 |
C4 |
H5 |
H6 |
118.0 |
120.0 |
| C6 |
C4 |
H5 |
H6 |
241.9 |
240.0 |
| N1 |
C4 |
H6 |
H5 |
242.0 |
240.0 |
| C6 |
C4 |
H6 |
H5 |
118.1 |
120.0 |