PDB Chemical Component S7D

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for S7D

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	C1	1.541	1.530
C1	O	1.448	1.430
C1	C2	1.554	1.533
O	C4	1.404	1.429
C2	N	1.493	1.471
C4	C3	1.545	1.532
N	C3	1.466	1.472
N	C5	1.415	1.348
C6	C5	1.534	1.507
C6	N1	1.473	1.465
C5	O1	1.227	1.212
N1	N2	1.373	1.401
N1	C7	1.404	1.349
N2	C9	1.371	1.309
C7	C8	1.378	1.353
C9	C8	1.439	1.398
C4	H1	1.100	1.090
C4	H2	1.100	1.090
C6	H3	1.100	1.090
C6	H4	1.100	1.090
C7	H5	1.080	1.080
C8	H6	1.080	1.080
C	H7	1.100	1.090
C	H8	1.100	1.090
C	H9	1.100	1.091
C1	H10	1.100	1.090
C2	H11	1.100	1.090
C2	H12	1.100	1.090
C3	H13	1.100	1.090
C3	H14	1.100	1.090
C9	H15	1.079	1.080

Bond Angles for S7D

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C	C1	O	107.5	109.5
C	C1	C2	108.8	109.5
C1	C	H7	109.5	109.5
C1	C	H8	109.5	109.5
C1	C	H9	109.5	109.5
C	C1	H10	110.3	109.5
C2	C1	H10	110.1	109.5
C1	C2	H11	109.9	109.7
C1	C2	H12	109.9	109.7
O	C4	C3	112.7	109.3
O	C4	H1	108.7	109.5
O	C4	H2	108.7	109.5
C2	N	C3	112.1	118.0
C4	C3	N	111.7	108.4
C3	C4	H1	108.7	109.5
C3	C4	H2	108.6	109.6
C4	C3	H13	108.9	109.7
C4	C3	H14	108.9	109.7
N	C3	H13	108.9	109.7
N	C3	H14	108.9	109.7
N	C5	O1	120.7	120.0
C6	C5	O1	119.1	120.0
C6	N1	N2	122.4	126.0
C6	N1	C7	124.8	126.0
C7	N1	N2	112.8	108.0
N1	N2	C9	104.1	108.1
N1	C7	C8	106.0	107.8
N1	C7	H5	127.0	126.1
N2	C9	H15	124.5	125.8
C8	C7	H5	127.0	126.1
C7	C8	H6	126.9	126.0
C9	C8	H6	126.9	126.0
H1	C4	H2	109.4	109.5
H3	C6	H4	109.5	109.4
H7	C	H8	109.4	109.5
H7	C	H9	109.5	109.5
H8	C	H9	109.5	109.4
H11	C2	H12	109.5	109.7
H13	C3	H14	109.5	109.7

Torsion Angles for S7D

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C	H10	120.8	120.1
C	C1	C2	H11	297.8	52.5
C	C1	C2	H12	58.4	291.9
H7	C	C1	H8	240.0	240.0
H7	C	C1	H9	120.0	120.0
H8	C	C1	H9	240.0	240.1
C	C1	O	C2	242.5	240.1
O	C1	C	H7	180.0	60.0
O	C1	C	H8	300.0	180.1
O	C1	C	H9	60.0	300.0
C	C1	O	H10	121.1	120.1
C1	O	C4	C3	55.8	62.5
C1	O	C4	H1	176.3	182.5
C1	O	C4	H2	295.3	302.6
C	C1	C2	O	116.6	119.9
C2	C1	C	H7	62.8	300.2
C2	C1	C	H8	182.8	60.3
C2	C1	C	H9	302.8	180.2
C	C1	C2	H10	239.0	239.9
C1	C2	N	C3	302.8	309.5
H11	C2	C1	H12	239.4	120.6
O	C4	C3	N	311.0	307.7
C3	C4	O	H1	239.5	240.0
C3	C4	O	H2	120.5	120.0
O	C4	C3	H13	71.3	67.4
O	C4	C3	H14	190.6	188.0
H1	C4	O	H2	241.0	240.0
C4	C3	N	C2	50.7	50.5
C2	N	C3	H13	290.4	290.8
C2	N	C3	H14	171.0	170.2
C2	N	C5	O1	174.6	0.0
O	C4	C3	H1	120.5	119.9
O	C4	C3	H2	239.5	240.0
C2	N	C3	C4	50.7	50.5
N	C3	C4	H13	239.7	240.3
N	C3	C4	H14	120.3	119.7
H1	C4	C3	H2	119.0	120.1
H13	C3	C4	H14	240.7	239.4
N	C3	C4	H1	190.5	187.8
N	C3	C4	H2	71.5	67.7
C4	C3	N	H13	120.3	119.8
C4	C3	N	H14	239.7	240.3
C3	N	C5	O1	10.1	180.0
H13	C3	N	H14	119.3	120.5
C4	C3	N	C5	217.1	230.6
C6	C5	N	O1	179.3	180.0
N	C5	C6	O1	180.7	180.0
C5	C6	N1	N2	254.9	305.0
C5	C6	N1	C7	75.6	125.3
C7	N1	C6	N2	180.7	180.3
C6	N1	N2	C9	180.5	180.3
C6	N1	C7	C8	179.3	179.8
C6	N1	C7	H5	359.3	359.7
C6	N1	N2	C7	180.6	180.2
N2	N1	C7	C8	360.0	360.0
N2	N1	C7	H5	180.0	180.0
N1	N2	C9	H15	180.2	179.9
C6	N1	C7	N2	179.3	179.8
C7	N1	N2	C9	359.9	0.0
C8	C7	N1	H5	180.0	180.0
N1	C7	C8	H6	180.2	180.0
N2	C9	C8	H6	179.8	180.0
C8	C7	N1	N2	360.0	360.0
N1	C7	C8	H5	180.0	180.0
C9	C8	C7	H6	180.0	180.0
N1	N2	C9	C8	0.2	360.0
C9	C8	C7	H5	180.2	180.0
C7	C8	C9	H6	180.0	180.0
O	C4	H1	C3	237.0	240.2
O	C4	H1	H2	118.6	120.1
H1	C4	C3	N	190.5	187.8
C3	C4	H1	H2	241.5	239.9
H1	C4	C3	H13	310.8	307.5
H1	C4	C3	H14	70.1	68.1
O	C4	H2	C3	122.9	119.8
O	C4	H2	H1	241.5	240.0
H2	C4	C3	N	71.5	67.7
C3	C4	H2	H1	118.5	120.1
H2	C4	C3	H13	191.8	187.4
H2	C4	C3	H14	311.1	308.0
H3	C6	C5	O1	127.7	240.0
H3	C6	N1	N2	135.0	65.0
H3	C6	N1	C7	315.7	245.3
H4	C6	C5	O1	247.9	120.0
H4	C6	N1	N2	14.9	185.0
H4	C6	N1	C7	195.6	5.3
H5	C7	N1	N2	180.0	180.0
N1	C7	H5	C8	180.0	180.0
H5	C7	C8	H6	0.2	0.0
H6	C8	C7	H5	0.2	0.0
H7	C	C1	O	180.0	60.0
H7	C	C1	C2	62.8	300.2
C1	C	H7	H8	120.0	120.0
C1	C	H7	H9	240.0	240.0
H7	C	C1	H10	302.0	180.1
H8	C	H7	H9	120.0	120.0
H8	C	C1	O	300.0	180.1
H8	C	C1	C2	182.8	60.3
C1	C	H8	H7	240.0	240.0
C1	C	H8	H9	120.0	120.0
H8	C	C1	H10	61.9	300.2
H7	C	H8	H9	240.0	240.0
H9	C	C1	O	60.0	300.0
H9	C	C1	C2	302.8	180.2
C1	C	H9	H7	120.0	120.0
C1	C	H9	H8	240.0	240.0
H9	C	C1	H10	181.9	60.1
H7	C	H9	H8	120.0	120.0
C	C1	H10	O	240.6	239.9
C	C1	H10	C2	120.1	120.1
H10	C1	C	H7	302.0	180.1
H10	C1	C	H8	61.9	300.2
H10	C1	C	H9	181.9	60.1
H10	C1	C2	H11	58.7	172.6
H10	C1	C2	H12	179.3	52.0
H11	C2	C1	H10	58.7	172.6
C1	C2	H11	H12	120.8	239.4
H11	C2	N	C3	183.1	69.2
H12	C2	C1	H10	179.3	52.0
C1	C2	H12	H11	239.2	120.6
H12	C2	N	C3	62.5	189.8
C4	C3	H13	N	238.0	241.0
H13	C3	C4	H1	310.8	307.5
H13	C3	C4	H2	191.8	187.4
C4	C3	H13	H14	119.0	120.6
N	C3	H13	H14	241.0	239.5
C4	C3	H14	N	122.1	118.9
H14	C3	C4	H1	70.1	68.1
H14	C3	C4	H2	311.1	308.0
C4	C3	H14	H13	241.0	239.4
N	C3	H14	H13	119.0	120.5
H15	C9	C8	H6	359.8	0.0