PDB Chemical Component S6W
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for S6W
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| F5 |
C11 |
1.327 |
1.399 |
| F3 |
C11 |
1.331 |
1.399 |
| F4 |
C11 |
1.323 |
1.400 |
| C11 |
C1 |
1.512 |
1.507 |
| C |
C1 |
1.319 |
1.383 |
| C |
C5 |
1.315 |
1.382 |
| C1 |
C2 |
1.329 |
1.382 |
| CL |
C5 |
1.724 |
1.735 |
| C5 |
C4 |
1.322 |
1.390 |
| C2 |
C3 |
1.330 |
1.383 |
| C4 |
C3 |
1.330 |
1.388 |
| C4 |
N |
1.436 |
1.401 |
| C3 |
CL1 |
1.723 |
1.736 |
| N |
N1 |
1.319 |
1.400 |
| N |
C6 |
1.324 |
1.363 |
| N3 |
C6 |
1.453 |
1.393 |
| N1 |
C8 |
1.324 |
1.320 |
| C6 |
C7 |
1.327 |
1.358 |
| C8 |
C7 |
1.338 |
1.411 |
| C8 |
C9 |
1.489 |
1.432 |
| C7 |
S |
1.745 |
1.762 |
| F1 |
C10 |
1.332 |
1.399 |
| F |
C10 |
1.328 |
1.400 |
| C9 |
N2 |
1.280 |
1.136 |
| C10 |
S |
1.768 |
1.814 |
| C10 |
F2 |
1.329 |
1.399 |
| O |
S |
1.462 |
1.421 |
| C |
H1 |
1.080 |
1.080 |
| C2 |
H3 |
1.080 |
1.080 |
| N3 |
H6 |
1.000 |
0.969 |
| N3 |
H7 |
1.000 |
0.970 |
Bond Angles for S6W
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C1 |
C2 |
122.1 |
119.9 |
| C1 |
C |
C5 |
120.0 |
120.1 |
| C |
C1 |
C2 |
121.5 |
120.2 |
| C1 |
C |
H1 |
120.0 |
120.0 |
| C |
C5 |
C4 |
119.1 |
119.9 |
| C5 |
C |
H1 |
120.0 |
119.9 |
| C1 |
C2 |
C3 |
118.6 |
120.0 |
| C1 |
C2 |
H3 |
120.7 |
120.0 |
| C2 |
C3 |
CL1 |
120.1 |
120.0 |
| C3 |
C2 |
H3 |
120.7 |
120.0 |
| C4 |
C3 |
CL1 |
120.6 |
120.1 |
| C4 |
N |
N1 |
125.3 |
126.0 |
| C4 |
N |
C6 |
125.8 |
126.0 |
| C6 |
N |
N1 |
108.9 |
108.0 |
| N |
N1 |
C8 |
107.7 |
108.3 |
| N |
C6 |
C7 |
107.7 |
107.8 |
| C6 |
C7 |
S |
123.1 |
126.1 |
| C8 |
C7 |
S |
129.3 |
126.1 |
| C8 |
C9 |
N2 |
132.6 |
180.0 |
| C10 |
S |
C7 |
107.9 |
103.0 |
| O |
S |
C7 |
107.1 |
103.0 |
| F1 |
C10 |
S |
109.0 |
109.5 |
| F1 |
C10 |
F2 |
109.7 |
109.5 |
| F |
C10 |
S |
109.4 |
109.4 |
| F |
C10 |
F2 |
110.4 |
109.4 |
| F2 |
C10 |
S |
110.2 |
109.5 |
| C10 |
S |
O |
118.6 |
109.5 |
| H6 |
N3 |
H7 |
109.4 |
120.0 |
Torsion Angles for S6W
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C1 |
C |
C5 |
181.1 |
180.1 |
| C |
C1 |
C11 |
C2 |
180.7 |
179.9 |
| C11 |
C1 |
C |
H1 |
1.2 |
359.7 |
| C11 |
C1 |
C2 |
C3 |
179.8 |
180.0 |
| C11 |
C1 |
C2 |
H3 |
359.8 |
359.9 |
| C11 |
C1 |
C |
C2 |
179.3 |
180.1 |
| C1 |
C |
C5 |
C4 |
358.4 |
360.0 |
| C5 |
C |
C1 |
H1 |
180.0 |
180.3 |
| C |
C1 |
C2 |
C3 |
359.1 |
0.0 |
| C |
C1 |
C2 |
H3 |
179.1 |
180.0 |
| C5 |
C |
C1 |
C2 |
1.8 |
0.0 |
| C1 |
C |
C5 |
H1 |
180.0 |
179.7 |
| C2 |
C1 |
C |
C5 |
1.8 |
0.0 |
| C2 |
C1 |
C |
H1 |
181.8 |
179.7 |
| C1 |
C2 |
C3 |
CL1 |
179.9 |
180.0 |
| C3 |
C2 |
C1 |
H3 |
180.0 |
180.1 |
| CL |
C5 |
C |
H1 |
359.1 |
0.3 |
| C4 |
C5 |
C |
H1 |
178.4 |
180.3 |
| C5 |
C4 |
C3 |
CL1 |
180.3 |
180.0 |
| C5 |
C4 |
N |
N1 |
97.0 |
236.8 |
| C5 |
C4 |
N |
C6 |
279.2 |
57.1 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
CL1 |
180.0 |
180.0 |
| C |
C5 |
C4 |
C3 |
0.6 |
0.0 |
| C2 |
C3 |
C4 |
CL1 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H3 |
179.9 |
180.0 |
| C3 |
C4 |
N |
N1 |
277.3 |
56.8 |
| C3 |
C4 |
N |
C6 |
99.6 |
237.1 |
| C6 |
N |
C4 |
N1 |
182.2 |
180.3 |
| C4 |
N |
N1 |
C8 |
181.2 |
180.3 |
| C4 |
N |
C6 |
C7 |
178.5 |
179.7 |
| CL1 |
C3 |
C2 |
H3 |
359.9 |
0.0 |
| C4 |
N |
N1 |
C6 |
181.9 |
180.2 |
| N1 |
N |
C6 |
C7 |
0.4 |
360.0 |
| C4 |
N |
C6 |
N1 |
178.1 |
179.8 |
| C6 |
N |
N1 |
C8 |
359.3 |
0.0 |
| N |
C6 |
C7 |
S |
179.5 |
180.0 |
| N3 |
C6 |
C7 |
S |
359.3 |
360.0 |
| N1 |
C8 |
C7 |
S |
180.1 |
180.0 |
| N1 |
C8 |
C9 |
N2 |
180.1 |
89.9 |
| C7 |
C6 |
N |
N1 |
0.4 |
360.0 |
| C8 |
C7 |
C6 |
S |
180.5 |
180.1 |
| C10 |
S |
C7 |
C6 |
113.7 |
90.0 |
| O |
S |
C7 |
C6 |
344.9 |
336.2 |
| N |
N1 |
C8 |
C7 |
0.7 |
0.0 |
| C6 |
C7 |
C8 |
S |
179.4 |
179.9 |
| C10 |
S |
C7 |
C8 |
293.0 |
269.9 |
| O |
S |
C7 |
C8 |
164.2 |
156.1 |
| N |
N1 |
C8 |
C9 |
180.5 |
179.9 |
| C9 |
C8 |
C7 |
S |
0.4 |
0.1 |
| F1 |
C10 |
S |
C7 |
263.5 |
180.0 |
| F |
C10 |
S |
C7 |
21.5 |
300.0 |
| F2 |
C10 |
S |
C7 |
143.1 |
59.9 |
| C10 |
S |
C7 |
O |
128.8 |
113.9 |
| F |
C10 |
F1 |
S |
241.2 |
240.0 |
| F |
C10 |
F1 |
F2 |
120.5 |
120.0 |
| F2 |
C10 |
F1 |
S |
120.7 |
120.0 |
| F1 |
C10 |
S |
O |
25.4 |
289.1 |
| F1 |
C10 |
F |
S |
118.6 |
120.0 |
| F1 |
C10 |
F |
F2 |
240.0 |
240.0 |
| F2 |
C10 |
F |
S |
238.6 |
240.0 |
| F |
C10 |
S |
O |
143.5 |
49.1 |
| C6 |
C7 |
S |
C10 |
113.7 |
90.0 |
| C8 |
C7 |
S |
C10 |
293.0 |
269.9 |
| O |
S |
C10 |
C7 |
121.9 |
109.1 |
| F1 |
C10 |
S |
F2 |
120.4 |
120.1 |
| F |
C10 |
S |
F2 |
238.5 |
240.1 |
| F1 |
C10 |
F2 |
S |
240.0 |
239.9 |
| F |
C10 |
F2 |
S |
120.9 |
120.0 |
| F2 |
C10 |
S |
O |
265.0 |
169.0 |
| C6 |
C7 |
S |
O |
344.9 |
336.2 |
| C8 |
C7 |
S |
O |
164.2 |
156.1 |
| C10 |
S |
O |
C7 |
237.7 |
250.9 |
| C1 |
C |
H1 |
C5 |
180.0 |
180.3 |
| H1 |
C |
C1 |
C2 |
181.8 |
179.7 |
| H1 |
C |
C5 |
C4 |
178.4 |
180.3 |
| C1 |
C2 |
H3 |
C3 |
180.0 |
180.1 |
| H3 |
C2 |
C3 |
CL1 |
359.9 |
0.0 |