PDB Chemical Component S61

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for S61

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C26 C25 1.568 1.507
C25 C24 1.402 1.382
C25 C20 1.404 1.382
C24 C23 1.394 1.383
C23 C22 1.405 1.383
C22 C21 1.395 1.381
C21 C20 1.406 1.383
C20 C16 1.579 1.506
C16 C17 1.572 1.531
C16 N15 1.479 1.465
C17 C18 1.563 1.507
C18 O27 1.237 1.209
C18 O19 1.257 1.342
N15 C14 1.326 1.348
C14 O28 1.228 1.215
C14 C10 1.529 1.482
C10 N9 1.334 1.376
C10 C11 1.336 1.356
N9 N7 1.233 1.399
C11 C12 1.334 1.466
C12 O13 1.346 1.217
C12 N7 1.335 1.348
N7 C5 1.370 1.400
C5 C4 1.403 1.388
C5 C6 1.386 1.391
C4 C3 1.398 1.381
C3 C2 1.390 1.382
C2 C1 1.394 1.382
C1 C6 1.409 1.383
C6 F8 1.352 1.350
C26 H261 1.100 1.090
C26 H262 1.100 1.090
C26 H263 1.100 1.090
C24 H24 1.080 1.080
C23 H23 1.079 1.080
C22 H22 1.080 1.080
C21 H21 1.080 1.080
C16 H16 1.100 1.090
C17 H171 1.100 1.090
C17 H172 1.100 1.090
N15 H15 1.000 0.969
O19 H19 0.950 0.967
N9 H9 1.000 0.970
C11 H11 1.080 1.080
C4 H4 1.080 1.080
C3 H3 1.080 1.081
C2 H2 1.080 1.080
C1 H1 1.080 1.080

Bond Angles for S61

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C26 C25 C24 119.4 120.0
C26 C25 C20 121.3 120.0
C25 C26 H261 109.5 109.5
C25 C26 H262 109.5 109.5
C25 C26 H263 109.5 109.5
C24 C25 C20 119.3 120.0
C25 C24 C23 120.3 120.0
C25 C24 H24 119.8 120.0
C25 C20 C21 119.0 120.0
C25 C20 C16 120.8 120.0
C24 C23 C22 121.7 119.9
C23 C24 H24 119.8 120.0
C24 C23 H23 119.1 120.0
C23 C22 C21 117.0 120.0
C22 C23 H23 119.2 120.1
C23 C22 H22 121.5 119.9
C22 C21 C20 122.6 120.0
C21 C22 H22 121.5 120.0
C22 C21 H21 118.7 120.0
C21 C20 C16 120.2 120.0
C20 C21 H21 118.7 120.0
C20 C16 C17 112.5 109.5
C20 C16 N15 107.2 109.5
C20 C16 H16 109.7 109.5
C17 C16 N15 106.6 109.4
C16 C17 C18 112.7 109.5
C17 C16 H16 109.7 109.5
C16 C17 H171 108.7 109.4
C16 C17 H172 108.7 109.4
C16 N15 C14 127.8 120.0
N15 C16 H16 111.0 109.5
C16 N15 H15 116.1 120.0
C17 C18 O27 115.8 120.0
C17 C18 O19 119.2 120.0
C18 C17 H171 108.7 109.5
C18 C17 H172 108.7 109.5
O27 C18 O19 125.0 120.0
C18 O19 H19 109.5 117.0
N15 C14 O28 125.6 120.0
N15 C14 C10 111.8 120.0
C14 N15 H15 116.1 120.0
O28 C14 C10 122.6 120.0
C14 C10 N9 120.9 125.8
C14 C10 C11 127.9 125.8
N9 C10 C11 111.0 108.4
C10 N9 N7 108.5 109.1
C10 N9 H9 109.7 125.4
C10 C11 C12 101.2 107.2
C10 C11 H11 129.4 126.4
N9 N7 C12 107.7 108.2
N9 N7 C5 125.8 125.9
N7 N9 H9 109.7 125.5
C11 C12 O13 126.1 126.5
C11 C12 N7 111.5 107.0
C12 C11 H11 129.4 126.4
O13 C12 N7 122.4 126.5
C12 N7 C5 126.5 125.9
N7 C5 C4 122.5 120.1
N7 C5 C6 119.6 120.1
C4 C5 C6 117.9 119.8
C5 C4 C3 120.5 119.9
C5 C4 H4 119.8 120.0
C5 C6 C1 121.6 119.9
C5 C6 F8 117.3 120.1
C4 C3 C2 121.6 120.1
C3 C4 H4 119.8 120.1
C4 C3 H3 119.2 119.9
C3 C2 C1 118.2 120.2
C2 C3 H3 119.2 120.0
C3 C2 H2 120.9 119.9
C2 C1 C6 120.2 120.1
C1 C2 H2 120.9 119.9
C2 C1 H1 119.9 120.0
C1 C6 F8 121.1 120.1
C6 C1 H1 119.9 120.0
H261 C26 H262 109.5 109.4
H261 C26 H263 109.4 109.4
H262 C26 H263 109.5 109.5
H171 C17 H172 109.4 109.4

Torsion Angles for S61

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C24 C25 C26 C20 180.9 180.3
C26 C25 C24 C23 180.1 180.0
C26 C25 C24 H24 0.1 359.9
C26 C25 C20 C21 180.8 179.8
C26 C25 C20 C16 0.6 360.0
H261 C26 C25 H262 240.0 240.0
H261 C26 C25 H263 120.0 120.0
H262 C26 C25 H263 240.0 240.0
C26 C25 C24 C20 179.1 179.7
C24 C25 C26 H261 90.4 90.0
C24 C25 C26 H262 210.5 210.0
C24 C25 C26 H263 330.4 330.1
C24 C25 C20 C21 359.9 359.5
C24 C25 C20 C16 179.7 179.7
C25 C24 C23 C22 359.4 360.0
C23 C24 C25 H24 180.0 180.1
C25 C24 C23 H23 179.5 180.0
C26 C25 C20 C24 180.9 180.3
C20 C25 C26 H261 269.5 269.7
C20 C25 C26 H262 29.5 29.7
C20 C25 C26 H263 149.5 149.8
C20 C25 C24 C23 1.0 0.3
C20 C25 C24 H24 181.0 180.2
C22 C21 C20 C25 358.6 0.4
C21 C20 C25 C16 180.2 179.8
C25 C20 C21 H21 178.6 180.2
C25 C20 C16 C17 191.6 272.8
C25 C20 C16 N15 74.7 152.8
C25 C20 C16 H16 314.1 32.8
C23 C24 C25 C20 1.0 0.3
C25 C24 C23 H24 180.0 179.9
C24 C23 C22 C21 359.2 360.0
C22 C23 C24 H23 180.0 180.0
C24 C23 C22 H22 179.2 179.9
C22 C23 C24 H24 179.4 180.0
C24 C23 C22 H23 180.0 180.0
C23 C22 C21 C20 1.8 359.8
C21 C22 C23 H22 180.0 180.0
C23 C22 C21 H21 181.8 180.0
C25 C20 C21 C22 358.6 0.4
C21 C22 C23 H23 179.2 180.0
C23 C22 C21 H22 180.0 180.0
C22 C21 C20 C16 178.8 180.2
C20 C21 C22 H21 180.0 179.8
C25 C20 C21 C16 179.8 180.2
C20 C21 C22 H22 181.8 179.9
C22 C21 C20 H21 180.0 180.2
C21 C20 C16 C17 11.4 93.0
C21 C20 C16 N15 254.5 333.0
C21 C20 C16 H16 133.9 213.0
C25 C20 C16 C21 180.2 179.8
C16 C20 C21 H21 358.8 0.0
C17 C16 C20 N15 116.9 120.0
C20 C16 C17 C18 71.3 174.7
C17 C16 C20 H16 237.6 240.0
C20 C16 C17 H171 191.8 294.8
C20 C16 C17 H172 310.8 54.7
C20 C16 N15 C14 208.9 275.7
N15 C16 C20 H16 120.6 120.0
C20 C16 N15 H15 28.9 95.7
C20 C16 C17 N15 242.7 240.0
C20 C16 C17 H16 122.4 120.0
C17 C16 N15 C14 88.2 155.7
N15 C16 C17 H16 239.7 240.0
C17 C16 N15 H15 268.2 335.6
C16 C17 C18 O27 37.1 354.3
C16 C17 C18 O19 218.2 174.3
C18 C17 C16 H171 239.5 239.9
C18 C17 C16 H172 120.5 120.0
H171 C17 C16 H172 241.0 240.1
C20 C16 N15 C17 120.7 120.0
C20 C16 N15 H16 240.2 240.0
N15 C16 C17 C18 188.6 294.7
C17 C16 N15 H16 119.5 120.0
N15 C16 C17 H171 309.1 54.8
N15 C16 C17 H172 68.1 174.7
C16 N15 C14 O28 0.9 4.7
C16 N15 C14 C10 182.6 184.7
C14 N15 C16 H15 180.0 180.0
C18 C17 C16 N15 188.6 294.7
C18 C17 C16 H16 308.9 54.7
C16 C17 C18 H171 120.5 120.0
C16 C17 C18 H172 239.5 240.0
O27 C18 C17 O19 178.9 180.0
C17 C18 O19 H19 178.7 180.1
H171 C17 C18 H172 119.0 120.0
C17 C18 O27 O19 181.2 180.0
O27 C18 C17 H171 276.6 234.3
O27 C18 C17 H172 157.6 114.3
O27 C18 O19 H19 360.0 0.1
C17 C18 O19 O27 178.8 180.0
O19 C18 C17 H171 97.7 54.3
O19 C18 C17 H172 338.7 294.3
C14 N15 C16 H16 328.6 35.7
C16 N15 C14 H15 180.0 180.0
O28 C14 N15 C10 178.3 180.0
N15 C14 C10 N9 2.4 180.0
N15 C14 C10 C11 177.9 359.7
N15 C14 O28 C10 181.9 180.0
O28 C14 N15 H15 180.8 184.8
O28 C14 C10 N9 184.1 360.0
O28 C14 C10 C11 359.6 179.7
N15 C14 C10 O28 178.4 180.0
C10 C14 N15 H15 2.5 4.8
N9 C10 C14 C11 184.5 180.3
C14 C10 N9 N7 178.0 179.9
C14 C10 N9 H9 297.8 360.0
C14 C10 C11 C12 181.7 180.0
C14 C10 C11 H11 1.7 359.9
C14 C10 N9 C11 176.2 179.8
N9 C10 C11 C12 357.5 359.8
N9 C10 C11 H11 177.5 179.7
C10 N9 N7 C12 359.9 359.9
C10 N9 N7 C5 178.1 180.0
N7 N9 C10 H9 240.1 180.0
C14 C10 C11 N9 184.1 180.2
C11 C10 N9 N7 1.7 0.2
C11 C10 N9 H9 121.6 180.2
C10 C11 C12 O13 182.1 180.0
C10 C11 C12 N7 2.4 0.1
C12 C11 C10 H11 180.0 180.1
N7 N9 C10 C11 1.7 0.2
C10 N9 N7 H9 119.9 180.0
C11 C12 N7 N9 358.5 360.0
O13 C12 N7 N9 178.8 180.1
C12 N7 N9 C5 181.8 180.0
N9 N7 C5 C4 65.9 125.0
N9 N7 C5 C6 246.3 304.8
C10 C11 C12 H11 180.0 179.9
N9 N7 C12 C11 358.5 360.0
O13 C12 C11 N7 179.7 179.9
C11 C12 N7 C5 180.3 179.9
N9 N7 C12 O13 178.8 180.1
C11 C12 O13 N7 180.4 180.2
O13 C12 C11 H11 2.1 0.1
O13 C12 N7 C5 0.6 0.0
N9 N7 C12 C5 178.2 180.0
C12 N7 N9 H9 240.0 179.9
C11 C12 N7 O13 179.7 179.9
N7 C12 C11 H11 182.4 180.2
C12 N7 C5 C4 243.8 305.1
C12 N7 C5 C6 64.3 124.8
N9 N7 C5 C12 182.1 180.0
C5 N7 N9 H9 58.2 359.9
C4 C5 N7 C6 179.5 180.2
N7 C5 C4 C3 180.4 180.0
N7 C5 C4 H4 0.5 0.0
N7 C5 C6 C1 179.6 179.8
N7 C5 C6 F8 359.7 360.0
N7 C5 C4 C6 180.4 179.8
C4 C5 C6 C1 0.0 359.5
C4 C5 C6 F8 180.2 179.7
C5 C4 C3 C2 359.9 0.0
C3 C4 C5 H4 180.0 179.9
C5 C4 C3 H3 179.9 180.1
N7 C5 C6 C4 179.6 180.2
C6 C5 C4 C3 0.0 0.2
C6 C5 C4 H4 180.0 180.3
C2 C1 C6 C5 0.1 0.5
C1 C6 C5 F8 179.8 179.8
C5 C6 C1 H1 180.0 180.3
C3 C4 C5 C6 0.0 0.2
C5 C4 C3 H4 180.0 180.1
C4 C3 C2 C1 0.2 360.0
C2 C3 C4 H3 180.0 180.0
C4 C3 C2 H2 180.1 179.9
C2 C3 C4 H4 179.9 180.0
C4 C3 C2 H3 180.0 180.0
C3 C2 C1 C6 359.8 359.8
C1 C2 C3 H2 180.0 180.1
C3 C2 C1 H1 179.9 179.9
C5 C6 C1 C2 0.1 0.5
C1 C2 C3 H3 180.2 180.0
C3 C2 C1 H2 180.0 179.9
C2 C1 C6 F8 179.9 180.3
C6 C1 C2 H1 180.0 179.9
C5 C6 C1 F8 180.2 180.2
C6 C1 C2 H2 179.9 179.8
C2 C1 C6 H1 180.0 180.1
C5 C6 F8 C1 179.8 179.8
F8 C6 C1 H1 359.9 0.2
H261 C26 C25 C24 90.4 90.0
H261 C26 C25 C20 269.5 269.7
C25 C26 H261 H262 120.0 120.0
C25 C26 H261 H263 240.0 240.0
H262 C26 H261 H263 120.0 120.0
H262 C26 C25 C24 210.5 210.0
H262 C26 C25 C20 29.5 29.7
C25 C26 H262 H261 240.0 240.0
C25 C26 H262 H263 120.0 120.0
H261 C26 H262 H263 240.0 240.1
H263 C26 C25 C24 330.4 330.1
H263 C26 C25 C20 149.5 149.8
C25 C26 H263 H261 120.0 120.0
C25 C26 H263 H262 240.0 240.0
H261 C26 H263 H262 120.0 120.0
H24 C24 C25 C20 181.0 180.2
C25 C24 H24 C23 180.0 180.1
H24 C24 C23 C22 179.4 180.0
H24 C24 C23 H23 359.5 0.0
C24 C23 H23 C22 180.0 180.0
H23 C23 C24 H24 359.5 0.0
H23 C23 C22 C21 179.2 180.0
H23 C23 C22 H22 359.1 359.9
C23 C22 H22 C21 180.0 180.0
H22 C22 C23 H23 359.1 359.9
H22 C22 C21 C20 181.8 179.9
H22 C22 C21 H21 1.9 0.1
C22 C21 H21 C20 180.0 179.8
H21 C21 C22 H22 1.9 0.1
H21 C21 C20 C16 358.8 0.0
C20 C16 H16 C17 235.9 240.0
C20 C16 H16 N15 118.3 120.0
C17 C16 H16 N15 242.3 240.0
H16 C16 C17 C18 308.9 54.7
H16 C16 C17 H171 69.4 174.8
H16 C16 C17 H172 188.4 294.7
H16 C16 N15 C14 328.6 35.7
H16 C16 N15 H15 148.7 215.7
H171 C17 C16 N15 309.1 54.8
C16 C17 H171 C18 237.0 240.0
H171 C17 C16 H16 69.4 174.8
C16 C17 H171 H172 118.5 119.9
H171 C17 C18 O27 276.6 234.3
H171 C17 C18 O19 97.7 54.3
C18 C17 H171 H172 241.5 239.9
H172 C17 C16 N15 68.1 174.7
C16 C17 H172 C18 123.0 120.0
H172 C17 C16 H16 188.4 294.7
C16 C17 H172 H171 241.5 240.1
H172 C17 C18 O27 157.6 114.3
H172 C17 C18 O19 338.7 294.3
C18 C17 H172 H171 118.5 120.1
C16 N15 H15 C14 180.0 180.0
H15 N15 C16 H16 148.7 215.7
H15 N15 C14 O28 180.8 184.8
H15 N15 C14 C10 2.5 4.8
H9 N9 C10 C11 121.6 180.2
C10 N9 H9 N7 240.9 180.0
H9 N9 N7 C12 240.0 179.9
H9 N9 N7 C5 58.2 359.9
C10 C11 H11 C12 180.0 180.1
H11 C11 C12 O13 2.1 0.1
H11 C11 C12 N7 182.4 180.2
H4 C4 C5 C6 180.0 180.3
C5 C4 H4 C3 180.0 179.9
H4 C4 C3 C2 179.9 180.0
H4 C4 C3 H3 359.9 0.0
C4 C3 H3 C2 180.0 180.0
H3 C3 C4 H4 359.9 0.0
H3 C3 C2 C1 180.2 180.0
H3 C3 C2 H2 0.2 359.9
C3 C2 H2 C1 180.0 180.1
H2 C2 C3 H3 0.2 359.9
H2 C2 C1 C6 179.9 179.8
H2 C2 C1 H1 359.9 360.0
C2 C1 H1 C6 180.0 179.9
H1 C1 C2 H2 359.9 360.0
H1 C1 C6 F8 359.9 0.2