PDB Chemical Component S51

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for S51

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.396 1.384
C1 C6 1.395 1.383
C2 C3 1.401 1.381
C3 C4 1.412 1.388
C4 C5 1.412 1.389
C4 N12 1.357 1.401
C5 C6 1.400 1.381
N12 C13 1.347 1.381
N12 C16 1.353 1.357
C13 C14 1.405 1.404
C13 C17 1.403 1.390
C14 C15 1.403 1.475
C14 C20 1.402 1.392
C15 C16 1.399 1.364
C15 C39 1.518 1.468
C16 C60 1.519 1.507
C17 C18 1.398 1.378
C18 C19 1.402 1.387
C19 C20 1.401 1.378
C26 C29 1.397 1.382
C26 C33 1.400 1.382
C26 C60 1.505 1.507
C29 C30 1.391 1.382
C30 C31 1.398 1.382
C31 C32 1.399 1.383
C32 C33 1.393 1.383
C39 N40 1.352 1.348
C39 O41 1.224 1.218
N40 C42 1.472 1.471
N40 C46 1.478 1.471
C42 C43 1.523 1.533
C43 N44 1.453 1.468
N44 C45 1.457 1.469
C45 C46 1.534 1.527
C1 H1 1.080 1.079
C2 H2 1.080 1.080
C3 H3 1.080 1.080
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C17 H17 1.080 1.080
C18 H18 1.080 1.080
C19 H19 1.080 1.080
C20 H20 1.080 1.081
C29 H29 1.080 1.080
C30 H30 1.080 1.079
C31 H31 1.080 1.080
C32 H32 1.080 1.080
C33 H33 1.080 1.081
C42 H42 1.100 1.090
C42 H42A 1.100 1.090
C43 H43 1.100 1.090
C43 H43A 1.101 1.090
N44 HN44 1.000 1.009
C45 H45 1.100 1.090
C45 H45A 1.100 1.091
C46 H46 1.100 1.090
C46 H46A 1.100 1.090
C60 H60 1.100 1.090
C60 H60A 1.100 1.090

Bond Angles for S51

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 119.0 120.1
C1 C2 C3 119.5 120.1
C2 C1 H1 120.5 119.9
C1 C2 H2 120.3 120.0
C1 C6 C5 120.2 120.1
C6 C1 H1 120.5 120.0
C1 C6 H6 119.9 119.9
C2 C3 C4 123.9 119.9
C3 C2 H2 120.3 120.0
C2 C3 H3 118.0 120.0
C3 C4 C5 114.2 119.9
C3 C4 N12 122.1 120.1
C4 C3 H3 118.0 120.0
C5 C4 N12 123.7 120.0
C4 C5 C6 123.2 119.9
C4 C5 H5 118.4 120.0
C4 N12 C13 122.0 124.8
C4 N12 C16 123.2 124.8
C6 C5 H5 118.4 120.1
C5 C6 H6 119.9 120.0
C13 N12 C16 114.6 110.4
N12 C13 C14 105.2 107.4
N12 C13 C17 134.9 133.2
N12 C16 C15 103.7 109.7
N12 C16 C60 127.9 125.2
C14 C13 C17 119.9 119.4
C13 C14 C15 106.7 106.0
C13 C14 C20 120.7 120.1
C13 C17 C18 119.5 120.0
C13 C17 H17 120.2 120.0
C15 C14 C20 132.3 134.0
C14 C15 C16 109.1 106.5
C14 C15 C39 121.4 126.7
C14 C20 C19 118.8 119.7
C14 C20 H20 120.6 120.2
C16 C15 C39 127.9 126.8
C15 C16 C60 127.9 125.1
C15 C39 N40 123.4 120.0
C15 C39 O41 117.2 120.0
C16 C60 C26 110.7 109.4
C16 C60 H60 109.1 109.5
C16 C60 H60A 109.0 109.5
C17 C18 C19 120.3 120.6
C18 C17 H17 120.3 120.0
C17 C18 H18 119.8 119.7
C18 C19 C20 120.7 120.2
C19 C18 H18 119.9 119.7
C18 C19 H19 119.7 119.9
C20 C19 H19 119.6 119.9
C19 C20 H20 120.6 120.1
C29 C26 C33 121.4 120.0
C29 C26 C60 118.7 120.0
C26 C29 C30 119.5 120.0
C26 C29 H29 120.2 120.0
C33 C26 C60 119.9 120.0
C26 C33 C32 119.2 120.0
C26 C33 H33 120.4 120.0
C26 C60 H60 109.1 109.5
C26 C60 H60A 109.1 109.5
C29 C30 C31 119.1 120.0
C30 C29 H29 120.2 120.0
C29 C30 H30 120.4 120.0
C30 C31 C32 121.5 120.0
C31 C30 H30 120.5 120.0
C30 C31 H31 119.2 120.0
C31 C32 C33 119.3 119.9
C32 C31 H31 119.2 119.9
C31 C32 H32 120.4 120.0
C33 C32 H32 120.4 120.0
C32 C33 H33 120.4 120.0
N40 C39 O41 119.4 120.0
C39 N40 C42 123.5 120.9
C39 N40 C46 121.0 120.8
C42 N40 C46 115.5 118.2
N40 C42 C43 107.5 108.5
N40 C42 H42 110.1 109.6
N40 C42 H42A 110.1 109.6
N40 C46 C45 109.0 108.8
N40 C46 H46 109.6 109.6
N40 C46 H46A 109.6 109.6
C42 C43 N44 112.0 109.3
C43 C42 H42 110.1 109.7
C43 C42 H42A 110.1 109.6
C42 C43 H43 108.7 109.4
C42 C43 H43A 108.6 109.5
C43 N44 C45 118.7 111.3
N44 C43 H43 108.6 109.5
N44 C43 H43A 108.6 109.5
C43 N44 HN44 106.5 111.1
N44 C45 C46 111.4 109.4
C45 N44 HN44 106.5 111.0
N44 C45 H45 108.8 109.5
N44 C45 H45A 108.8 109.4
C46 C45 H45 108.8 109.6
C46 C45 H45A 108.8 109.4
C45 C46 H46 109.6 109.5
C45 C46 H46A 109.6 109.5
H42 C42 H42A 108.8 109.8
H43 C43 H43A 110.3 109.6
H45 C45 H45A 110.1 109.5
H46 C46 H46A 109.3 109.8
H60 C60 H60A 109.9 109.4

Torsion Angles for S51

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 C5 0.8 0.0
C6 C1 C2 H1 180.0 180.3
C2 C1 C6 H6 180.8 180.0
C1 C2 C3 C4 359.6 360.0
C3 C2 C1 H2 180.0 179.9
C1 C2 C3 H3 179.6 180.0
C6 C1 C2 C3 0.1 360.0
C2 C1 C6 H1 180.0 179.7
C6 C1 C2 H2 180.1 180.1
C4 C5 C6 C1 358.6 359.9
C1 C6 C5 H5 178.6 180.1
C5 C6 C1 H6 180.0 180.1
C3 C2 C1 C6 0.1 360.0
C3 C2 C1 H1 180.1 179.7
C1 C2 C3 H2 180.0 180.1
C2 C3 C4 C5 359.9 360.0
C2 C3 C4 N12 179.8 180.0
C4 C3 C2 H3 180.0 180.0
C4 C3 C2 H2 179.6 179.9
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 N12 180.1 180.0
C3 C4 C5 C6 1.0 0.1
C3 C4 C5 H5 181.0 179.9
C3 C4 N12 C13 75.2 65.0
C3 C4 N12 C16 249.7 244.7
C1 C6 C5 C4 358.6 359.9
C3 C4 C5 N12 179.9 180.0
C5 C4 C3 H3 179.8 180.0
C5 C4 N12 C13 255.1 245.0
C5 C4 N12 C16 69.5 64.7
C6 C5 C4 H5 180.0 180.1
C4 C5 C6 H6 178.6 180.0
C3 C4 N12 C5 180.1 180.0
N12 C4 C3 H3 359.7 360.0
N12 C4 C5 C6 181.1 180.1
N12 C4 C5 H5 1.1 359.9
C13 N12 C4 C16 185.5 180.3
C4 N12 C13 C14 176.9 180.0
C4 N12 C13 C17 355.2 360.0
C4 N12 C16 C15 178.4 179.9
C4 N12 C16 C60 6.3 360.0
C5 C6 C1 H1 180.8 180.3
C1 C6 C5 H6 180.0 179.9
C6 C5 C4 N12 181.1 180.1
C4 C5 C6 H5 180.0 179.9
C4 N12 C13 C16 174.9 179.7
C13 N12 C16 C15 353.3 359.6
C13 N12 C16 C60 181.1 179.7
C14 C13 N12 C17 181.7 180.0
N12 C13 C14 C15 3.6 0.0
N12 C13 C14 C20 179.0 180.0
N12 C13 C17 C18 181.6 180.0
N12 C13 C17 H17 1.6 0.0
C4 N12 C16 C13 185.2 180.3
C16 N12 C13 C14 2.0 0.2
C16 N12 C13 C17 180.3 180.2
C14 C15 C16 N12 8.7 0.4
N12 C16 C15 C39 174.0 180.1
C15 C16 N12 C60 172.1 179.9
N12 C16 C60 C26 116.8 93.3
N12 C16 C60 H60 236.8 213.3
N12 C16 C60 H60A 356.7 333.2
C14 C13 N12 C16 2.0 0.2
N12 C13 C14 C17 178.6 180.0
C14 C13 C17 C18 359.7 360.0
C14 C13 C17 H17 179.7 180.0
C15 C14 C13 C20 184.6 180.0
C13 C14 C15 C16 352.1 359.8
C13 C14 C15 C39 185.7 180.0
C13 C14 C20 C19 359.7 0.0
C13 C14 C20 H20 179.7 180.0
C17 C13 N12 C16 180.3 180.2
N12 C13 C17 C14 181.9 180.0
C17 C13 C14 C15 185.0 180.0
C17 C13 C14 C20 0.4 360.0
C13 C17 C18 C19 0.1 0.1
C18 C17 C13 H17 180.0 180.0
C13 C17 C18 H18 180.2 180.0
N12 C16 C15 C14 8.7 0.4
C15 C14 C13 C17 185.0 180.0
C13 C14 C15 C20 174.6 180.0
C15 C14 C20 C19 173.7 180.0
C15 C14 C20 H20 353.7 360.0
C16 C15 C14 C39 166.4 179.8
C14 C15 C16 C60 180.9 180.3
C14 C15 C39 N40 289.2 87.7
C14 C15 C39 O41 111.1 267.7
C20 C14 C13 C17 0.4 360.0
C13 C14 C20 C15 186.0 180.0
C20 C14 C15 C16 177.5 179.8
C20 C14 C15 C39 11.1 0.0
C18 C19 C20 C14 0.1 360.0
C14 C20 C19 H19 180.1 179.9
C19 C20 C14 H20 180.0 180.0
N12 C16 C15 C60 187.9 180.1
C16 C15 C14 C20 177.5 179.8
C14 C15 C16 C39 194.7 180.2
C16 C15 C39 N40 125.5 267.9
C16 C15 C39 O41 307.5 87.9
C15 C16 C60 C26 306.5 273.4
C15 C16 C60 H60 66.5 33.4
C15 C16 C60 H60A 186.5 153.4
C39 C15 C14 C20 11.1 0.0
C14 C15 C39 C16 163.7 179.7
C39 C15 C16 C60 346.1 0.0
N40 C39 C15 O41 178.1 180.0
C15 C39 N40 C42 1.9 175.0
C15 C39 N40 C46 179.4 354.7
N12 C16 C60 C15 170.3 179.9
C60 C16 C15 C39 346.1 0.0
C29 C26 C60 C16 122.4 96.5
C33 C26 C60 C16 303.6 276.2
C26 C60 C16 H60 240.0 240.0
C26 C60 C16 H60A 120.0 120.0
H60 C60 C16 H60A 240.0 240.0
C13 C17 C18 H17 180.0 180.0
C17 C18 C19 C20 360.0 360.0
C19 C18 C17 H18 180.0 180.0
C17 C18 C19 H19 180.0 180.0
C14 C20 C19 C18 0.1 360.0
C19 C18 C17 H17 180.2 180.0
C17 C18 C19 H18 180.0 180.0
C20 C19 C18 H19 180.0 179.9
C18 C19 C20 H20 180.1 180.0
C14 C20 C19 H20 180.0 180.0
C20 C19 C18 H18 179.9 180.0
C18 C19 C20 H19 180.0 180.1
C16 C60 C26 C29 122.4 96.5
C33 C26 C29 C60 178.8 180.3
C29 C26 C33 C32 360.0 0.1
C29 C26 C33 H33 180.0 179.9
C29 C26 C60 H60 2.3 336.5
C29 C26 C60 H60A 242.3 216.5
C26 C29 C30 C31 0.0 360.0
C30 C29 C26 H29 180.0 180.0
C26 C29 C30 H30 180.0 179.9
C16 C60 C26 C33 303.6 276.2
C29 C26 C33 C60 181.3 179.7
C33 C26 C29 C30 359.5 0.0
C33 C26 C29 H29 179.4 180.0
C33 C26 C60 H60 183.6 156.2
C33 C26 C60 H60A 63.6 36.2
C31 C32 C33 C26 1.1 359.9
C26 C33 C32 H32 181.1 180.0
C32 C33 C26 H33 180.0 180.1
C16 C60 C26 H60 120.0 120.0
C16 C60 C26 H60A 240.0 240.0
C29 C26 C60 C33 178.8 180.3
C60 C26 C29 C30 180.7 179.7
C60 C26 C29 H29 0.7 359.6
C60 C26 C33 C32 178.7 180.4
C60 C26 C33 H33 358.7 0.3
H60 C60 C26 H60A 120.0 120.0
C30 C29 C26 C33 359.5 0.0
C30 C29 C26 C60 180.7 179.7
C26 C29 C30 H29 180.0 180.0
C29 C30 C31 C32 1.1 359.9
C31 C30 C29 H30 180.0 180.1
C29 C30 C31 H31 181.1 180.0
C31 C30 C29 H29 180.0 180.0
C29 C30 C31 H30 180.0 179.9
C30 C31 C32 C33 358.4 0.1
C32 C31 C30 H31 180.0 180.0
C30 C31 C32 H32 178.4 180.0
C26 C33 C32 C31 1.1 359.9
C32 C31 C30 H30 181.1 180.0
C30 C31 C32 H31 180.0 180.0
C33 C32 C31 H32 180.0 180.2
C31 C32 C33 H33 181.1 180.0
C32 C33 C26 C60 178.7 180.4
C26 C33 C32 H33 180.0 179.9
C33 C32 C31 H31 178.4 180.1
C31 C32 C33 H32 180.0 179.8
C15 C39 N40 O41 182.0 180.0
C42 N40 C39 C46 182.6 180.3
C39 N40 C42 C43 237.0 128.8
C39 N40 C42 H42 357.0 248.6
C39 N40 C42 H42A 117.1 9.1
C39 N40 C46 C45 124.3 231.1
C39 N40 C46 H46 244.3 350.9
C39 N40 C46 H46A 4.3 111.4
C15 C39 O41 N40 178.2 180.0
O41 C39 N40 C42 179.9 355.0
O41 C39 N40 C46 357.4 174.7
C42 N40 C39 O41 179.9 355.0
C39 N40 C42 C46 177.6 179.8
C42 N40 C46 C45 301.9 50.9
C42 N40 C46 H46 61.9 170.6
C42 N40 C46 H46A 182.0 291.2
N40 C42 C43 N44 308.9 53.9
C43 C42 N40 H42 240.0 240.3
C43 C42 N40 H42A 120.0 119.7
N40 C42 C43 H43 68.9 173.8
N40 C42 C43 H43A 188.9 293.9
H42 C42 N40 H42A 240.0 239.4
C46 N40 C39 O41 357.4 174.7
C39 N40 C46 C42 182.4 180.2
C46 N40 C42 C43 59.5 309.1
C46 N40 C42 H42 179.5 68.8
C46 N40 C42 H42A 299.5 189.4
N44 C45 C46 N40 47.3 306.5
N40 C46 C45 H45 287.3 186.3
N40 C46 C45 H45A 167.3 66.3
C45 C46 N40 H46 240.0 240.2
C45 C46 N40 H46A 120.0 119.7
H46 C46 N40 H46A 240.0 239.4
C43 C42 N40 C46 59.5 309.1
N40 C42 C43 H42 120.0 119.7
N40 C42 C43 H42A 240.0 240.3
C42 C43 N44 C45 48.5 296.9
N44 C43 C42 H43 240.0 240.1
N44 C43 C42 H43A 120.0 120.0
C42 C43 N44 HN44 168.5 61.0
H42 C42 C43 H42A 120.0 120.6
H43 C43 C42 H43A 240.0 239.9
N44 C43 C42 H42 188.9 294.1
N44 C43 C42 H42A 68.9 173.5
C42 C43 N44 H43 120.0 119.9
C42 C43 N44 H43A 240.0 240.0
C43 N44 C45 C46 313.9 62.9
C45 N44 C43 HN44 240.0 235.8
C43 N44 C45 H45 73.9 183.1
C43 N44 C45 H45A 193.9 303.1
H43 C43 N44 H43A 120.0 120.1
N40 C46 C45 N44 47.3 306.5
C45 N44 C43 H43 288.5 177.0
C45 N44 C43 H43A 168.5 56.9
C43 N44 C45 HN44 120.0 124.2
C46 C45 N44 H45 240.0 239.8
C46 C45 N44 H45A 120.0 119.8
N44 C45 C46 H46 287.2 186.6
N44 C45 C46 H46A 167.3 66.2
H45 C45 N44 H45A 240.0 240.0
N40 C46 C45 H46 120.0 119.8
N40 C46 C45 H46A 240.0 240.2
C46 C45 N44 HN44 193.9 298.7
N44 C45 C46 H45 120.0 120.1
N44 C45 C46 H45A 240.0 240.1
H45 C45 C46 H45A 120.0 120.0
H46 C46 C45 H46A 120.0 120.4
C2 C1 H1 C6 180.0 180.3
H1 C1 C2 C3 180.1 179.7
H1 C1 C2 H2 0.1 359.8
H1 C1 C6 C5 180.8 180.3
H1 C1 C6 H6 0.8 0.3
H2 C2 C1 C6 180.1 180.1
C1 C2 H2 C3 180.0 179.9
H2 C2 C1 H1 0.1 359.8
H2 C2 C3 C4 179.6 179.9
H2 C2 C3 H3 359.6 359.9
C2 C3 H3 C4 180.0 180.0
H3 C3 C2 H2 359.6 359.9
H3 C3 C4 C5 179.8 180.0
H3 C3 C4 N12 359.7 360.0
H5 C5 C4 N12 1.1 359.9
C4 C5 H5 C6 180.0 180.1
H5 C5 C6 H6 358.6 0.1
C1 C6 H6 C5 180.0 180.1
H6 C6 C1 H1 0.8 0.3
H6 C6 C5 H5 358.6 0.1
C13 C17 H17 C18 180.0 180.0
H17 C17 C18 C19 180.2 180.0
H17 C17 C18 H18 0.2 360.0
C17 C18 H18 C19 180.0 180.0
H18 C18 C17 H17 0.2 360.0
H18 C18 C19 C20 179.9 180.0
H18 C18 C19 H19 359.9 0.0
C18 C19 H19 C20 180.0 179.9
H19 C19 C18 H18 359.9 0.0
H19 C19 C20 H20 0.1 360.0
C14 C20 H20 C19 180.0 180.0
H20 C20 C19 H19 0.1 360.0
H29 C29 C26 C33 179.4 180.0
H29 C29 C26 C60 0.7 359.6
C26 C29 H29 C30 180.0 180.0
H29 C29 C30 C31 180.0 180.0
H29 C29 C30 H30 0.0 360.0
C29 C30 H30 C31 180.0 180.1
H30 C30 C29 H29 0.0 360.0
H30 C30 C31 C32 181.1 180.0
H30 C30 C31 H31 1.0 0.0
C30 C31 H31 C32 180.0 180.0
H31 C31 C30 H30 1.0 0.0
H31 C31 C32 C33 178.4 180.1
H31 C31 C32 H32 358.4 359.9
C31 C32 H32 C33 180.0 180.2
H32 C32 C31 H31 358.4 359.9
H32 C32 C33 H33 1.1 0.2
H33 C33 C26 C60 358.7 0.3
C26 C33 H33 C32 180.0 180.1
H33 C33 C32 H32 1.1 0.2
H42 C42 N40 C46 179.5 68.8
N40 C42 H42 C43 241.6 241.0
N40 C42 H42 H42A 120.8 120.5
H42 C42 C43 N44 188.9 294.1
C43 C42 H42 H42A 239.2 239.5
H42 C42 C43 H43 308.9 54.0
H42 C42 C43 H43A 68.9 174.1
H42A C42 N40 C46 299.5 189.4
N40 C42 H42A C43 118.4 119.0
N40 C42 H42A H42 239.2 239.5
H42A C42 C43 N44 68.9 173.5
C43 C42 H42A H42 120.8 120.5
H42A C42 C43 H43 188.9 293.4
H42A C42 C43 H43A 308.9 53.5
C42 C43 H43 N44 237.9 240.2
H43 C43 C42 H42 308.9 54.0
H43 C43 C42 H42A 188.9 293.4
C42 C43 H43 H43A 119.0 120.1
H43 C43 N44 C45 288.5 177.0
N44 C43 H43 H43A 241.0 239.9
H43 C43 N44 HN44 48.5 301.2
C42 C43 H43A N44 122.1 119.9
H43A C43 C42 H42 68.9 174.1
H43A C43 C42 H42A 308.9 53.5
C42 C43 H43A H43 241.0 240.0
H43A C43 N44 C45 168.5 56.9
N44 C43 H43A H43 118.9 120.1
H43A C43 N44 HN44 288.5 181.0
C43 N44 HN44 C45 232.4 235.7
HN44 N44 C43 H43 48.5 301.2
HN44 N44 C43 H43A 288.5 181.0
HN44 N44 C45 C46 193.9 298.7
HN44 N44 C45 H45 313.9 58.9
HN44 N44 C45 H45A 73.9 178.9
N44 C45 H45 C46 238.4 239.9
H45 C45 N44 HN44 313.9 58.9
N44 C45 H45 H45A 119.2 120.0
C46 C45 H45 H45A 240.8 240.1
H45 C45 C46 H46 167.3 66.5
H45 C45 C46 H46A 47.3 306.1
N44 C45 H45A C46 121.6 119.8
H45A C45 N44 HN44 73.9 178.9
N44 C45 H45A H45 240.8 239.9
C46 C45 H45A H45 119.2 120.1
H45A C45 C46 H46 47.2 306.5
H45A C45 C46 H46A 287.3 186.1
N40 C46 H46 C45 240.4 240.7
N40 C46 H46 H46A 120.2 120.5
H46 C46 C45 H45 167.3 66.5
H46 C46 C45 H45A 47.2 306.5
C45 C46 H46 H46A 239.8 239.8
N40 C46 H46A C45 119.6 119.2
N40 C46 H46A H46 239.8 239.5
H46A C46 C45 H45 47.3 306.1
H46A C46 C45 H45A 287.3 186.1
C45 C46 H46A H46 120.2 120.3
C16 C60 H60 C26 239.0 240.0
C16 C60 H60 H60A 119.5 120.0
C26 C60 H60 H60A 240.5 240.0
C16 C60 H60A C26 121.0 120.0
C16 C60 H60A H60 240.5 240.0
C26 C60 H60A H60 119.5 120.0