PDB Chemical Component S42

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for S42

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N01 C02 1.356 1.323
N01 C06 1.356 1.319
C02 N02 1.359 1.390
C02 C03 1.398 1.392
C03 C04 1.399 1.383
C04 C05 1.399 1.389
C04 C07 1.504 1.507
C05 C06 1.400 1.381
C06 C08 1.543 1.507
C08 C09 1.525 1.530
C09 C11 1.518 1.507
C11 C12 1.406 1.383
C11 C16 1.384 1.382
C12 C13 1.412 1.382
C13 C14 1.388 1.383
C14 C15 1.408 1.382
C15 C16 1.408 1.382
C15 C29 1.485 1.507
N21 C22 1.363 1.324
N21 C26 1.368 1.320
C22 N22 1.369 1.389
C22 C23 1.407 1.392
C23 C24 1.411 1.384
C24 C25 1.392 1.388
C24 C27 1.509 1.506
C25 C26 1.386 1.380
C26 C28 1.505 1.507
C28 C29 1.529 1.530
C29 C30 1.536 1.530
C30 N31 1.446 1.469
N02 HN02 1.000 0.970
N02 HN0A 1.000 0.970
C03 H03 1.080 1.079
C05 H05 1.079 1.079
C07 H07 1.100 1.090
C07 H07A 1.100 1.090
C07 H07B 1.100 1.090
C08 H08 1.100 1.090
C08 H08A 1.100 1.090
C09 H09 1.100 1.090
C09 H09A 1.100 1.090
C12 H12 1.080 1.080
C13 H13 1.080 1.080
C14 H14 1.080 1.080
C16 H16 1.080 1.081
N22 HN22 1.000 0.970
N22 HN2A 1.000 0.970
C23 H23 1.080 1.079
C25 H25 1.080 1.080
C27 H27 1.100 1.090
C27 H27A 1.100 1.091
C27 H27B 1.100 1.091
C28 H28 1.100 1.089
C28 H28A 1.100 1.090
C29 H29 1.100 1.089
C30 H30 1.100 1.090
C30 H30A 1.100 1.090
N31 HN31 1.000 1.009
N31 HN3A 0.999 1.009

Bond Angles for S42

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C02 N01 C06 123.3 121.7
N01 C02 N02 118.2 119.7
N01 C02 C03 119.8 120.6
N01 C06 C05 118.2 120.8
N01 C06 C08 118.5 119.6
N02 C02 C03 122.0 119.7
C02 N02 HN02 109.5 120.0
C02 N02 HN0A 109.5 120.0
C02 C03 C04 118.7 119.0
C02 C03 H03 120.7 120.5
C03 C04 C05 119.7 118.5
C03 C04 C07 121.1 120.7
C04 C03 H03 120.6 120.5
C05 C04 C07 119.2 120.8
C04 C05 C06 120.2 119.3
C04 C05 H05 119.9 120.3
C04 C07 H07 109.5 109.4
C04 C07 H07A 109.5 109.5
C04 C07 H07B 109.5 109.5
C05 C06 C08 123.3 119.6
C06 C05 H05 119.9 120.4
C06 C08 C09 115.1 109.5
C06 C08 H08 108.1 109.4
C06 C08 H08A 108.0 109.4
C08 C09 C11 113.2 109.5
C09 C08 H08 108.1 109.5
C09 C08 H08A 108.0 109.5
C08 C09 H09 108.6 109.5
C08 C09 H09A 108.5 109.4
C09 C11 C12 124.3 120.0
C09 C11 C16 117.4 120.0
C11 C09 H09 108.5 109.5
C11 C09 H09A 108.5 109.5
C12 C11 C16 118.3 120.0
C11 C12 C13 121.3 120.0
C11 C12 H12 119.4 120.0
C11 C16 C15 120.3 120.0
C11 C16 H16 119.8 120.0
C12 C13 C14 120.6 120.0
C13 C12 H12 119.3 120.0
C12 C13 H13 119.7 120.0
C13 C14 C15 117.7 120.0
C14 C13 H13 119.7 120.0
C13 C14 H14 121.1 120.0
C14 C15 C16 121.8 120.0
C14 C15 C29 121.9 120.0
C15 C14 H14 121.1 120.0
C16 C15 C29 116.3 120.0
C15 C16 H16 119.9 120.0
C15 C29 C28 108.9 109.4
C15 C29 C30 112.2 109.5
C15 C29 H29 107.8 109.5
C22 N21 C26 122.2 121.6
N21 C22 N22 120.1 119.7
N21 C22 C23 118.2 120.6
N21 C26 C25 121.2 120.8
N21 C26 C28 120.7 119.6
N22 C22 C23 121.6 119.7
C22 N22 HN22 109.5 120.0
C22 N22 HN2A 109.4 120.0
C22 C23 C24 119.9 119.1
C22 C23 H23 120.0 120.5
C23 C24 C25 120.1 118.5
C23 C24 C27 121.8 120.7
C24 C23 H23 120.0 120.4
C25 C24 C27 118.1 120.8
C24 C25 C26 118.4 119.4
C24 C25 H25 120.8 120.3
C24 C27 H27 109.5 109.5
C24 C27 H27A 109.5 109.5
C24 C27 H27B 109.5 109.5
C25 C26 C28 118.1 119.6
C26 C25 H25 120.8 120.3
C26 C28 C29 108.9 109.4
C26 C28 H28 109.6 109.4
C26 C28 H28A 109.6 109.4
C28 C29 C30 113.1 109.5
C29 C28 H28 109.6 109.5
C29 C28 H28A 109.6 109.5
C28 C29 H29 107.3 109.5
C29 C30 N31 111.2 109.5
C30 C29 H29 107.3 109.5
C29 C30 H30 109.0 109.5
C29 C30 H30A 109.0 109.5
N31 C30 H30 109.0 109.5
N31 C30 H30A 109.0 109.5
C30 N31 HN31 109.5 111.0
C30 N31 HN3A 109.5 111.0
HN02 N02 HN0A 109.4 120.0
H07 C07 H07A 109.5 109.5
H07 C07 H07B 109.4 109.5
H07A C07 H07B 109.5 109.4
H08 C08 H08A 109.5 109.5
H09 C09 H09A 109.4 109.5
HN22 N22 HN2A 109.5 120.0
H27 C27 H27A 109.4 109.4
H27 C27 H27B 109.5 109.4
H27A C27 H27B 109.5 109.5
H28 C28 H28A 109.5 109.5
H30 C30 H30A 109.5 109.4
HN31 N31 HN3A 109.5 111.0

Torsion Angles for S42

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 N01 C06 C05 0.2 0.0
C02 N01 C06 C08 177.9 180.0
N02 C02 N01 C03 179.9 180.0
N01 C02 N02 HN02 0.0 360.0
N01 C02 N02 HN0A 120.0 180.0
N01 C02 C03 C04 0.1 0.0
N01 C02 C03 H03 180.1 180.0
C06 N01 C02 N02 180.1 180.0
C06 N01 C02 C03 0.2 360.0
C04 C05 C06 N01 359.0 0.0
C05 C06 N01 C08 182.4 180.0
N01 C06 C05 H05 179.0 180.0
N01 C06 C08 C09 142.4 305.0
N01 C06 C08 H08 263.3 65.1
N01 C06 C08 H08A 21.6 185.0
N02 C02 N01 C06 180.1 180.0
N01 C02 N02 C03 180.1 180.0
N02 C02 C03 C04 180.2 180.0
N02 C02 C03 H03 0.2 359.9
HN02 N02 C02 HN0A 240.0 180.0
C03 C02 N01 C06 0.2 360.0
N01 C02 C03 N02 179.9 180.0
C03 C02 N02 HN02 179.9 180.0
C03 C02 N02 HN0A 299.9 0.0
C02 C03 C04 C05 359.2 0.0
C02 C03 C04 C07 179.9 179.9
C04 C03 C02 H03 180.0 180.1
C02 C03 C04 H03 180.0 179.9
C05 C04 C03 C07 179.3 180.1
C03 C04 C05 C06 1.3 360.0
C03 C04 C05 H05 181.3 180.0
C03 C04 C07 H07 89.7 90.0
C03 C04 C07 H07A 209.7 210.0
C03 C04 C07 H07B 329.7 330.0
N01 C06 C05 C04 359.0 0.0
C03 C04 C05 C07 180.6 179.9
C05 C04 C03 H03 179.2 180.1
C05 C04 C07 H07 270.3 269.9
C05 C04 C07 H07A 30.3 30.0
C05 C04 C07 H07B 150.3 149.9
C04 C05 C06 C08 181.5 180.0
C06 C05 C04 H05 180.0 180.0
C03 C04 C07 C05 179.3 180.1
C07 C04 C03 H03 359.9 0.0
C07 C04 C05 C06 180.6 180.0
C07 C04 C05 H05 0.6 0.0
H07 C07 C04 H07A 240.0 240.0
H07 C07 C04 H07B 120.0 120.0
H07A C07 C04 H07B 240.0 240.0
N01 C06 C05 C08 177.5 180.0
C06 C05 C04 C07 180.6 180.0
C04 C05 C06 H05 180.0 180.0
C05 C06 C08 C09 319.9 125.0
C05 C06 C08 H08 80.8 245.0
C05 C06 C08 H08A 199.1 5.0
N01 C06 C08 C05 182.5 180.0
C08 C06 C05 H05 1.5 0.0
C06 C08 C09 C11 177.5 180.0
C09 C08 C06 H08 239.1 240.0
C09 C08 C06 H08A 120.8 120.0
C06 C08 C09 H09 298.1 300.0
C06 C08 C09 H09A 56.9 60.0
H08 C08 C06 H08A 241.7 240.1
C06 C08 C09 H08 120.8 120.0
C06 C08 C09 H08A 239.2 240.0
C08 C09 C11 C12 326.4 90.0
C08 C09 C11 C16 147.0 269.8
C11 C09 C08 H09 239.4 239.9
C11 C09 C08 H09A 120.6 120.0
H08 C08 C09 H08A 118.4 120.1
H09 C09 C08 H09A 241.1 240.0
C11 C09 C08 H08 56.7 60.0
C11 C09 C08 H08A 298.3 299.9
C08 C09 C11 H09 120.6 120.0
C08 C09 C11 H09A 239.4 240.1
C12 C11 C09 C16 179.3 180.3
C09 C11 C12 C13 179.5 180.0
C09 C11 C12 H12 359.6 359.9
C09 C11 C16 C15 181.1 179.8
C09 C11 C16 H16 1.1 0.0
H09 C09 C11 H09A 118.8 120.0
C09 C11 C12 C16 180.7 179.7
C12 C11 C09 H09 205.8 330.0
C12 C11 C09 H09A 86.9 210.0
C12 C11 C16 C15 1.7 359.5
C12 C11 C16 H16 181.7 179.7
C11 C12 C13 C14 0.3 359.9
C13 C12 C11 H12 180.0 180.1
C11 C12 C13 H13 180.3 179.9
C09 C11 C16 C12 179.4 180.3
C16 C11 C09 H09 26.5 149.7
C16 C11 C09 H09A 267.6 29.7
C16 C11 C12 C13 358.8 0.3
C16 C11 C12 H12 178.9 180.2
C14 C15 C16 C11 358.4 0.4
C11 C16 C15 C29 179.2 180.3
C15 C16 C11 H16 180.0 179.8
C13 C12 C11 C16 358.8 0.3
C11 C12 C13 H12 180.0 179.9
C12 C13 C14 C15 359.9 0.0
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 H14 179.9 180.0
C14 C13 C12 H12 180.3 180.0
C12 C13 C14 H13 180.0 180.0
C13 C14 C15 C16 0.7 359.8
C13 C14 C15 C29 179.9 180.0
C15 C14 C13 H14 180.0 180.0
C11 C16 C15 C14 358.4 0.4
C15 C14 C13 H13 180.0 180.0
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 C29 180.8 179.9
C14 C15 C16 H16 178.5 180.2
C14 C15 C29 C28 300.0 300.0
C14 C15 C29 C30 66.0 60.0
C14 C15 C29 H29 183.9 180.0
C11 C16 C15 H16 180.0 180.2
C14 C15 C16 C29 179.3 180.1
C16 C15 C14 H14 180.7 179.9
C16 C15 C29 C28 119.3 120.2
C16 C15 C29 C30 245.3 240.1
C16 C15 C29 H29 3.1 0.2
C14 C15 C29 C16 180.7 179.9
C29 C15 C14 H14 359.9 0.0
C29 C15 C16 H16 359.2 0.1
C26 C28 C29 C15 190.7 185.0
C28 C29 C15 C30 234.0 240.0
C15 C29 C28 H28 70.8 65.0
C15 C29 C28 H28A 310.6 304.9
C28 C29 C15 H29 116.1 120.0
C15 C29 C30 N31 33.9 65.0
C30 C29 C15 H29 242.1 240.0
C15 C29 C30 H30 154.2 185.0
C15 C29 C30 H30A 273.7 305.0
C22 N21 C26 C25 359.8 360.0
C22 N21 C26 C28 180.6 180.0
N22 C22 N21 C23 181.1 180.0
N21 C22 N22 HN22 0.0 360.0
N21 C22 N22 HN2A 120.0 180.0
N21 C22 C23 C24 0.7 359.9
N21 C22 C23 H23 180.7 180.0
C26 N21 C22 N22 180.5 180.0
C26 N21 C22 C23 359.5 0.0
C24 C25 C26 N21 0.7 0.0
C25 C26 N21 C28 179.2 180.0
N21 C26 C25 H25 180.7 180.0
N21 C26 C28 C29 63.8 305.0
N21 C26 C28 H28 183.7 65.0
N21 C26 C28 H28A 303.9 185.0
N22 C22 N21 C26 180.5 180.0
N21 C22 N22 C23 178.9 180.0
N22 C22 C23 C24 179.6 180.0
N22 C22 C23 H23 359.6 0.0
HN22 N22 C22 HN2A 240.0 180.0
C23 C22 N21 C26 359.5 0.0
N21 C22 C23 N22 181.1 180.0
C23 C22 N22 HN22 181.1 180.0
C23 C22 N22 HN2A 301.1 360.0
C22 C23 C24 C25 359.8 0.1
C22 C23 C24 C27 179.5 180.0
C24 C23 C22 H23 180.0 179.9
C22 C23 C24 H23 180.0 180.1
C25 C24 C23 C27 180.3 180.1
C23 C24 C25 C26 359.5 359.9
C23 C24 C25 H25 179.5 180.0
C23 C24 C27 H27 90.2 90.0
C23 C24 C27 H27A 210.1 210.0
C23 C24 C27 H27B 330.1 330.0
N21 C26 C25 C24 0.7 0.0
C23 C24 C25 C27 179.7 179.9
C25 C24 C23 H23 179.8 180.0
C25 C24 C27 H27 269.9 270.0
C25 C24 C27 H27A 29.8 30.0
C25 C24 C27 H27B 149.8 150.0
C24 C25 C26 C28 179.9 180.0
C26 C25 C24 H25 180.0 180.0
C23 C24 C27 C25 180.3 180.1
C27 C24 C23 H23 359.5 359.9
C27 C24 C25 C26 179.8 180.0
C27 C24 C25 H25 359.8 0.0
H27 C27 C24 H27A 240.0 240.0
H27 C27 C24 H27B 120.0 120.0
H27A C27 C24 H27B 240.0 240.0
N21 C26 C25 C28 180.8 180.0
C26 C25 C24 C27 179.8 180.0
C24 C25 C26 H25 180.0 180.0
C25 C26 C28 C29 244.6 125.0
C25 C26 C28 H28 4.5 245.0
C25 C26 C28 H28A 124.7 5.0
C15 C29 C28 C26 190.7 185.0
N21 C26 C28 C25 179.2 180.0
C28 C26 C25 H25 359.9 360.0
C26 C28 C29 C30 65.3 65.0
C29 C28 C26 H28 240.1 240.0
C29 C28 C26 H28A 119.9 120.0
C26 C28 C29 H29 307.2 305.0
H28 C28 C26 H28A 239.8 240.0
C15 C29 C28 C30 125.4 120.0
C15 C29 C28 H29 243.5 240.0
C26 C28 C29 H28 119.9 120.0
C26 C28 C29 H28A 240.1 240.1
C28 C29 C30 N31 157.5 185.0
C30 C29 C28 H29 118.1 120.0
C28 C29 C30 H30 277.8 305.0
C28 C29 C30 H30A 37.3 65.0
H28 C28 C29 H28A 120.2 120.1
C15 C29 C30 C28 236.4 240.0
C15 C29 C30 H29 118.2 120.0
C30 C29 C28 H28 305.4 305.0
C30 C29 C28 H28A 185.2 185.0
C28 C29 C30 H29 241.8 240.0
N31 C30 C29 H30 239.7 240.0
N31 C30 C29 H30A 120.3 120.0
C29 C30 N31 HN31 180.0 180.0
C29 C30 N31 HN3A 300.0 304.0
H30 C30 C29 H30A 240.5 240.0
N31 C30 C29 H29 275.7 305.0
C29 C30 N31 H30 120.3 120.1
C29 C30 N31 H30A 239.8 240.0
H30 C30 N31 H30A 119.5 119.9
HN31 N31 C30 HN3A 240.0 236.1
HN02 N02 C02 C03 179.9 180.0
C02 N02 HN02 HN0A 120.0 180.0
HN0A N02 C02 C03 299.9 0.0
C02 N02 HN0A HN02 240.0 180.0
C02 C03 H03 C04 180.0 180.1
H03 C03 C04 C05 179.2 180.1
H03 C03 C04 C07 359.9 0.0
H05 C05 C04 C07 0.6 0.0
C04 C05 H05 C06 180.0 180.0
H05 C05 C06 C08 1.5 0.0
C04 C07 H07 H07A 120.0 120.0
C04 C07 H07 H07B 240.0 240.0
H07A C07 H07 H07B 120.0 120.0
C04 C07 H07A H07 240.0 240.0
C04 C07 H07A H07B 120.0 120.0
H07 C07 H07A H07B 240.0 240.0
C04 C07 H07B H07 120.0 120.0
C04 C07 H07B H07A 240.0 240.0
H07 C07 H07B H07A 120.0 120.0
C06 C08 H08 C09 234.9 240.0
C06 C08 H08 H08A 117.4 119.9
H08 C08 C09 C11 56.7 60.0
C09 C08 H08 H08A 242.6 239.9
H08 C08 C09 H09 177.2 180.1
H08 C08 C09 H09A 296.1 300.0
C06 C08 H08A C09 125.1 120.0
C06 C08 H08A H08 242.6 240.1
H08A C08 C09 C11 298.3 299.9
C09 C08 H08A H08 117.5 120.1
H08A C08 C09 H09 58.9 60.0
H08A C08 C09 H09A 177.7 180.0
C08 C09 H09 C11 236.6 240.0
H09 C09 C08 H08 177.2 180.1
H09 C09 C08 H08A 58.9 60.0
C08 C09 H09 H09A 118.3 120.0
H09 C09 C11 C12 205.8 330.0
H09 C09 C11 C16 26.5 149.7
C11 C09 H09 H09A 241.7 240.0
C08 C09 H09A C11 123.4 120.0
H09A C09 C08 H08 296.1 300.0
H09A C09 C08 H08A 177.7 180.0
C08 C09 H09A H09 241.7 240.0
H09A C09 C11 C12 86.9 210.0
H09A C09 C11 C16 267.6 29.7
C11 C09 H09A H09 118.3 120.1
H12 C12 C11 C16 178.9 180.2
C11 C12 H12 C13 180.0 180.1
H12 C12 C13 C14 180.3 180.0
H12 C12 C13 H13 0.3 360.0
C12 C13 H13 C14 180.0 180.0
H13 C13 C12 H12 0.3 360.0
H13 C13 C14 C15 180.0 180.0
H13 C13 C14 H14 360.0 360.0
C13 C14 H14 C15 180.0 180.0
H14 C14 C13 H13 360.0 360.0
H14 C14 C15 C16 180.7 179.9
H14 C14 C15 C29 359.9 0.0
C11 C16 H16 C15 180.0 179.8
H16 C16 C15 C29 359.2 0.1
HN22 N22 C22 C23 181.1 180.0
C22 N22 HN22 HN2A 120.0 180.0
HN2A N22 C22 C23 301.1 360.0
C22 N22 HN2A HN22 240.0 180.0
C22 C23 H23 C24 180.0 179.9
H23 C23 C24 C25 179.8 180.0
H23 C23 C24 C27 359.5 359.9
H25 C25 C24 C27 359.8 0.0
C24 C25 H25 C26 180.0 180.0
H25 C25 C26 C28 359.9 360.0
C24 C27 H27 H27A 120.0 120.0
C24 C27 H27 H27B 240.0 240.0
H27A C27 H27 H27B 120.0 119.9
C24 C27 H27A H27 240.0 239.9
C24 C27 H27A H27B 120.0 120.0
H27 C27 H27A H27B 240.0 240.1
C24 C27 H27B H27 120.1 120.1
C24 C27 H27B H27A 240.0 240.0
H27 C27 H27B H27A 119.9 119.9
C26 C28 H28 C29 240.5 240.0
C26 C28 H28 H28A 120.2 120.0
H28 C28 C29 C30 305.4 305.0
C29 C28 H28 H28A 239.8 239.9
H28 C28 C29 H29 187.3 185.0
C26 C28 H28A C29 119.5 119.9
C26 C28 H28A H28 239.8 240.0
H28A C28 C29 C30 185.2 185.0
C29 C28 H28A H28 120.3 120.1
H28A C28 C29 H29 67.1 64.9
C15 C29 H29 C28 117.1 120.0
C15 C29 H29 C30 239.0 240.0
C28 C29 H29 C30 121.9 120.0
H29 C29 C28 H28 187.3 185.0
H29 C29 C28 H28A 67.1 64.9
H29 C29 C30 N31 275.7 305.0
H29 C29 C30 H30 36.0 65.0
H29 C29 C30 H30A 155.4 185.0
C29 C30 H30 N31 238.4 240.0
H30 C30 C29 H29 36.0 65.0
C29 C30 H30 H30A 119.2 120.0
N31 C30 H30 H30A 240.8 240.0
H30 C30 N31 HN31 59.7 60.0
H30 C30 N31 HN3A 179.7 183.9
C29 C30 H30A N31 121.6 120.0
H30A C30 C29 H29 155.4 185.0
C29 C30 H30A H30 240.8 240.0
N31 C30 H30A H30 119.2 120.0
H30A C30 N31 HN31 300.2 300.0
H30A C30 N31 HN3A 60.2 64.0
HN31 N31 C30 H30 59.7 60.0
HN31 N31 C30 H30A 300.2 300.0
C30 N31 HN31 HN3A 120.0 123.9
HN3A N31 C30 H30 179.7 183.9
HN3A N31 C30 H30A 60.2 64.0
C30 N31 HN3A HN31 240.0 236.1