PDB Chemical Component S2G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for S2G
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O2 |
1.255 |
1.342 |
C1 |
O1 |
1.248 |
1.208 |
C1 |
C2 |
1.529 |
1.507 |
C3 |
C4 |
1.530 |
1.530 |
C3 |
C2 |
1.531 |
1.530 |
C4 |
C5 |
1.531 |
1.506 |
C5 |
O5 |
1.251 |
1.342 |
C5 |
O4 |
1.249 |
1.209 |
O3 |
C2 |
1.431 |
1.430 |
C2 |
H2 |
1.100 |
1.090 |
C3 |
H3 |
1.100 |
1.091 |
C3 |
H3A |
1.100 |
1.089 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H4A |
1.100 |
1.090 |
O5 |
H5 |
0.950 |
0.967 |
O3 |
HO3 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.967 |
Bond Angles for S2G
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
O1 |
126.0 |
120.0 |
O2 |
C1 |
C2 |
116.8 |
120.0 |
C1 |
O2 |
HO2 |
109.5 |
117.0 |
O1 |
C1 |
C2 |
117.2 |
120.0 |
C1 |
C2 |
C3 |
109.0 |
109.5 |
C1 |
C2 |
O3 |
109.0 |
109.5 |
C1 |
C2 |
H2 |
110.1 |
109.5 |
C4 |
C3 |
C2 |
110.7 |
109.5 |
C3 |
C4 |
C5 |
110.8 |
109.5 |
C4 |
C3 |
H3 |
109.1 |
109.5 |
C4 |
C3 |
H3A |
109.1 |
109.5 |
C3 |
C4 |
H4 |
109.1 |
109.5 |
C3 |
C4 |
H4A |
109.1 |
109.4 |
C3 |
C2 |
O3 |
109.3 |
109.4 |
C3 |
C2 |
H2 |
109.7 |
109.5 |
C2 |
C3 |
H3 |
109.1 |
109.4 |
C2 |
C3 |
H3A |
109.1 |
109.5 |
C4 |
C5 |
O5 |
116.7 |
120.0 |
C4 |
C5 |
O4 |
117.1 |
120.0 |
C5 |
C4 |
H4 |
109.0 |
109.5 |
C5 |
C4 |
H4A |
109.1 |
109.5 |
O5 |
C5 |
O4 |
126.2 |
120.0 |
C5 |
O5 |
H5 |
109.5 |
117.0 |
O3 |
C2 |
H2 |
109.7 |
109.4 |
C2 |
O3 |
HO3 |
109.5 |
114.0 |
H3 |
C3 |
H3A |
109.8 |
109.5 |
H4 |
C4 |
H4A |
109.9 |
109.4 |
Torsion Angles for S2G
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
O2 |
C2 |
179.7 |
180.3 |
O2 |
C1 |
C2 |
C3 |
185.8 |
295.0 |
O2 |
C1 |
C2 |
O3 |
66.6 |
175.0 |
O2 |
C1 |
C2 |
H2 |
306.2 |
55.0 |
O2 |
C1 |
O1 |
C2 |
180.3 |
179.7 |
O1 |
C1 |
O2 |
HO2 |
360.0 |
360.0 |
O1 |
C1 |
C2 |
C3 |
6.1 |
114.7 |
O1 |
C1 |
C2 |
O3 |
246.9 |
354.7 |
O1 |
C1 |
C2 |
H2 |
126.5 |
234.7 |
O2 |
C1 |
C2 |
O1 |
179.8 |
180.3 |
C2 |
C1 |
O2 |
HO2 |
180.2 |
179.7 |
C4 |
C3 |
C2 |
C1 |
174.4 |
175.0 |
C3 |
C2 |
C1 |
O3 |
119.2 |
119.9 |
C3 |
C2 |
C1 |
H2 |
239.6 |
239.9 |
C1 |
C2 |
C3 |
H3 |
54.4 |
55.0 |
C1 |
C2 |
C3 |
H3A |
294.4 |
295.0 |
O3 |
C2 |
C1 |
H2 |
120.4 |
120.0 |
C1 |
C2 |
O3 |
HO3 |
180.0 |
60.1 |
C1 |
C2 |
C3 |
C4 |
174.4 |
175.0 |
C4 |
C3 |
C2 |
O3 |
293.4 |
295.0 |
C4 |
C3 |
C2 |
H2 |
53.8 |
54.9 |
C2 |
C3 |
C4 |
H3 |
240.0 |
240.1 |
C2 |
C3 |
C4 |
H3A |
120.0 |
120.1 |
C3 |
C4 |
C5 |
O5 |
152.0 |
180.0 |
C3 |
C4 |
C5 |
O4 |
331.8 |
360.0 |
C5 |
C4 |
C3 |
H4 |
240.0 |
240.0 |
C5 |
C4 |
C3 |
H4A |
120.0 |
120.0 |
H3 |
C3 |
C4 |
H3A |
240.0 |
240.0 |
H4 |
C4 |
C3 |
H4A |
240.0 |
240.1 |
C1 |
C2 |
C3 |
O3 |
241.0 |
240.0 |
C1 |
C2 |
C3 |
H2 |
120.6 |
120.1 |
C2 |
C3 |
C4 |
C5 |
177.3 |
180.1 |
C4 |
C3 |
C2 |
H3 |
120.0 |
120.0 |
C4 |
C3 |
C2 |
H3A |
240.0 |
239.9 |
C2 |
C3 |
C4 |
H4 |
297.3 |
300.1 |
C2 |
C3 |
C4 |
H4A |
57.2 |
60.0 |
O3 |
C2 |
C3 |
H2 |
239.6 |
240.0 |
C3 |
C2 |
O3 |
HO3 |
61.0 |
300.1 |
H3 |
C3 |
C2 |
H3A |
120.0 |
120.0 |
C5 |
C4 |
C3 |
C2 |
177.3 |
180.1 |
C5 |
C4 |
C3 |
H3 |
297.3 |
300.0 |
C5 |
C4 |
C3 |
H3A |
57.3 |
60.0 |
C3 |
C4 |
C5 |
H4 |
120.0 |
120.0 |
C3 |
C4 |
C5 |
H4A |
240.0 |
240.0 |
O5 |
C5 |
C4 |
O4 |
180.2 |
180.0 |
C4 |
C5 |
O5 |
H5 |
179.8 |
180.0 |
H4 |
C4 |
C5 |
H4A |
120.0 |
120.0 |
C4 |
C5 |
O5 |
O4 |
179.8 |
180.0 |
O5 |
C5 |
C4 |
H4 |
31.9 |
60.0 |
O5 |
C5 |
C4 |
H4A |
272.0 |
300.0 |
C4 |
C5 |
O4 |
O5 |
180.2 |
180.0 |
O4 |
C5 |
C4 |
H4 |
211.8 |
240.0 |
O4 |
C5 |
C4 |
H4A |
91.8 |
120.0 |
O4 |
C5 |
O5 |
H5 |
0.0 |
360.0 |
C1 |
C2 |
O3 |
C3 |
119.0 |
120.0 |
C1 |
C2 |
O3 |
H2 |
239.4 |
240.0 |
C3 |
C2 |
O3 |
H2 |
120.4 |
120.0 |
O3 |
C2 |
C3 |
H3 |
173.4 |
175.0 |
O3 |
C2 |
C3 |
H3A |
53.4 |
55.0 |
C1 |
C2 |
H2 |
C3 |
240.1 |
239.9 |
C1 |
C2 |
H2 |
O3 |
119.9 |
120.0 |
C3 |
C2 |
H2 |
O3 |
239.8 |
240.0 |
H2 |
C2 |
C3 |
H3 |
293.8 |
295.0 |
H2 |
C2 |
C3 |
H3A |
173.8 |
175.0 |
H2 |
C2 |
O3 |
HO3 |
300.6 |
180.1 |
C4 |
C3 |
H3 |
C2 |
239.0 |
240.0 |
H3 |
C3 |
C4 |
C5 |
297.3 |
300.0 |
C4 |
C3 |
H3 |
H3A |
119.5 |
120.0 |
H3 |
C3 |
C4 |
H4 |
57.3 |
60.0 |
H3 |
C3 |
C4 |
H4A |
177.3 |
179.9 |
H3 |
C3 |
C2 |
O3 |
173.4 |
175.0 |
H3 |
C3 |
C2 |
H2 |
293.8 |
295.0 |
C2 |
C3 |
H3 |
H3A |
240.5 |
240.0 |
C4 |
C3 |
H3A |
C2 |
121.0 |
120.1 |
H3A |
C3 |
C4 |
C5 |
57.3 |
60.0 |
C4 |
C3 |
H3A |
H3 |
240.5 |
240.0 |
H3A |
C3 |
C4 |
H4 |
177.3 |
180.0 |
H3A |
C3 |
C4 |
H4A |
297.2 |
299.9 |
H3A |
C3 |
C2 |
O3 |
53.4 |
55.0 |
H3A |
C3 |
C2 |
H2 |
173.8 |
175.0 |
C2 |
C3 |
H3A |
H3 |
119.5 |
119.9 |
H4 |
C4 |
C3 |
C2 |
297.3 |
300.1 |
C3 |
C4 |
H4 |
C5 |
238.9 |
240.0 |
H4 |
C4 |
C3 |
H3 |
57.3 |
60.0 |
H4 |
C4 |
C3 |
H3A |
177.3 |
180.0 |
C3 |
C4 |
H4 |
H4A |
119.5 |
119.9 |
H4 |
C4 |
C5 |
O5 |
31.9 |
60.0 |
H4 |
C4 |
C5 |
O4 |
211.8 |
240.0 |
C5 |
C4 |
H4 |
H4A |
240.5 |
240.0 |
H4A |
C4 |
C3 |
C2 |
57.2 |
60.0 |
C3 |
C4 |
H4A |
C5 |
121.1 |
120.0 |
H4A |
C4 |
C3 |
H3 |
177.3 |
179.9 |
H4A |
C4 |
C3 |
H3A |
297.2 |
299.9 |
C3 |
C4 |
H4A |
H4 |
240.5 |
240.0 |
H4A |
C4 |
C5 |
O5 |
272.0 |
300.0 |
H4A |
C4 |
C5 |
O4 |
91.8 |
120.0 |
C5 |
C4 |
H4A |
H4 |
119.5 |
120.0 |
H5 |
O5 |
C5 |
O4 |
0.0 |
360.0 |
HO3 |
O3 |
C2 |
H2 |
300.6 |
180.1 |
HO2 |
O2 |
C1 |
O1 |
360.0 |
360.0 |
HO2 |
O2 |
C1 |
C2 |
180.2 |
179.7 |