PDB Chemical Component S2C
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for S2C
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| OXT |
C |
1.335 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
| N |
CA |
1.488 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
HN2 |
1.000 |
1.009 |
| CA |
C |
1.562 |
1.507 |
| CA |
CB |
1.519 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.213 |
1.209 |
| CB |
SG |
1.787 |
1.814 |
| CB |
HB1 |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| SG |
CD |
1.787 |
1.815 |
| CD |
CE |
1.515 |
1.530 |
| CD |
HD1 |
1.100 |
1.090 |
| CD |
HD2 |
1.100 |
1.090 |
| CE |
B |
1.548 |
1.597 |
| CE |
HE1 |
1.100 |
1.089 |
| CE |
HE2 |
1.100 |
1.091 |
| B |
O1 |
1.438 |
1.367 |
| B |
O2 |
1.431 |
1.367 |
| B |
O3 |
1.463 |
1.367 |
| O1 |
HO1 |
0.950 |
0.967 |
| O2 |
HO2 |
0.950 |
0.967 |
| O3 |
HO3 |
0.950 |
0.967 |
Bond Angles for S2C
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
OXT |
HXT |
109.5 |
117.0 |
| OXT |
C |
CA |
111.7 |
120.0 |
| OXT |
C |
O |
121.7 |
120.0 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
HN2 |
109.5 |
111.0 |
| N |
CA |
C |
111.2 |
109.5 |
| N |
CA |
CB |
104.8 |
109.5 |
| N |
CA |
HA |
113.1 |
109.5 |
| H |
N |
HN2 |
109.5 |
111.0 |
| C |
CA |
CB |
114.1 |
109.4 |
| C |
CA |
HA |
103.7 |
109.5 |
| CA |
C |
O |
126.5 |
120.0 |
| CB |
CA |
HA |
110.2 |
109.5 |
| CA |
CB |
SG |
110.4 |
109.4 |
| CA |
CB |
HB1 |
109.2 |
109.5 |
| CA |
CB |
HB2 |
109.2 |
109.5 |
| SG |
CB |
HB1 |
109.2 |
109.5 |
| SG |
CB |
HB2 |
109.2 |
109.5 |
| CB |
SG |
CD |
96.7 |
103.0 |
| HB1 |
CB |
HB2 |
109.7 |
109.5 |
| SG |
CD |
CE |
109.1 |
109.4 |
| SG |
CD |
HD1 |
109.6 |
109.5 |
| SG |
CD |
HD2 |
109.6 |
109.4 |
| CE |
CD |
HD1 |
109.6 |
109.5 |
| CE |
CD |
HD2 |
109.6 |
109.4 |
| CD |
CE |
B |
114.9 |
109.4 |
| CD |
CE |
HE1 |
107.7 |
109.5 |
| CD |
CE |
HE2 |
107.7 |
109.4 |
| HD1 |
CD |
HD2 |
109.3 |
109.6 |
| B |
CE |
HE1 |
107.7 |
109.5 |
| B |
CE |
HE2 |
107.7 |
109.4 |
| CE |
B |
O1 |
113.2 |
109.4 |
| CE |
B |
O2 |
109.4 |
109.4 |
| CE |
B |
O3 |
112.1 |
109.4 |
| HE1 |
CE |
HE2 |
111.2 |
109.5 |
| O1 |
B |
O2 |
107.1 |
109.5 |
| O1 |
B |
O3 |
107.5 |
109.5 |
| B |
O1 |
HO1 |
109.5 |
114.0 |
| O2 |
B |
O3 |
107.2 |
109.5 |
| B |
O2 |
HO2 |
109.5 |
114.1 |
| B |
O3 |
HO3 |
109.5 |
114.0 |
Torsion Angles for S2C
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
C |
OXT |
172.0 |
160.0 |
| OXT |
C |
CA |
CB |
290.2 |
279.9 |
| OXT |
C |
CA |
HA |
50.1 |
40.0 |
| CA |
C |
OXT |
O |
180.6 |
180.1 |
| HXT |
OXT |
C |
CA |
180.6 |
180.0 |
| HXT |
OXT |
C |
O |
0.0 |
359.9 |
| OXT |
C |
CA |
N |
172.0 |
160.0 |
| H |
N |
CA |
HN2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
123.7 |
120.0 |
| C |
CA |
N |
HA |
243.8 |
240.0 |
| N |
CA |
C |
O |
352.6 |
340.0 |
| CB |
CA |
N |
HA |
120.1 |
120.0 |
| N |
CA |
CB |
SG |
236.1 |
300.0 |
| N |
CA |
CB |
HB1 |
356.1 |
60.0 |
| N |
CA |
CB |
HB2 |
116.1 |
180.0 |
| CA |
N |
H |
HN2 |
120.0 |
124.0 |
| H |
N |
CA |
C |
180.0 |
296.0 |
| H |
N |
CA |
CB |
56.3 |
176.0 |
| H |
N |
CA |
HA |
296.2 |
56.0 |
| CA |
N |
HN2 |
H |
240.0 |
236.0 |
| HN2 |
N |
CA |
C |
300.0 |
60.0 |
| HN2 |
N |
CA |
CB |
176.3 |
300.0 |
| HN2 |
N |
CA |
HA |
56.2 |
180.0 |
| CA |
C |
OXT |
HXT |
180.6 |
180.0 |
| OXT |
C |
CA |
O |
179.4 |
179.9 |
| C |
CA |
N |
H |
180.0 |
296.0 |
| C |
CA |
N |
HN2 |
300.0 |
60.0 |
| N |
CA |
C |
CB |
241.7 |
240.0 |
| N |
CA |
C |
HA |
121.8 |
120.0 |
| CB |
CA |
C |
HA |
240.1 |
240.0 |
| C |
CA |
CB |
SG |
114.2 |
180.0 |
| C |
CA |
CB |
HB1 |
234.3 |
300.0 |
| C |
CA |
CB |
HB2 |
354.3 |
60.0 |
| CB |
CA |
N |
H |
56.3 |
176.0 |
| CB |
CA |
N |
HN2 |
176.3 |
300.0 |
| N |
CA |
CB |
C |
121.9 |
120.0 |
| N |
CA |
CB |
HA |
238.0 |
240.0 |
| C |
CA |
CB |
HA |
116.1 |
120.0 |
| CB |
CA |
C |
O |
110.8 |
100.0 |
| SG |
CB |
CA |
HB1 |
240.0 |
240.0 |
| SG |
CB |
CA |
HB2 |
120.0 |
120.0 |
| CA |
CB |
SG |
CD |
173.8 |
180.0 |
| HB1 |
CB |
CA |
HB2 |
240.0 |
240.0 |
| HA |
CA |
N |
H |
296.2 |
56.0 |
| HA |
CA |
N |
HN2 |
56.2 |
180.0 |
| N |
CA |
HA |
C |
239.4 |
240.0 |
| N |
CA |
HA |
CB |
116.9 |
120.0 |
| C |
CA |
HA |
CB |
237.5 |
240.0 |
| HA |
CA |
C |
O |
230.7 |
220.0 |
| HA |
CA |
CB |
SG |
358.1 |
60.0 |
| HA |
CA |
CB |
HB1 |
118.1 |
180.0 |
| HA |
CA |
CB |
HB2 |
238.1 |
300.0 |
| O |
C |
OXT |
HXT |
0.0 |
359.9 |
| OXT |
C |
O |
CA |
180.6 |
180.1 |
| O |
C |
CA |
CB |
110.8 |
100.0 |
| O |
C |
CA |
HA |
230.7 |
220.0 |
| SG |
CB |
CA |
HA |
358.1 |
60.0 |
| CA |
CB |
SG |
HB1 |
120.0 |
120.0 |
| CA |
CB |
SG |
HB2 |
240.0 |
240.0 |
| HB1 |
CB |
SG |
HB2 |
120.0 |
120.0 |
| CB |
SG |
CD |
CE |
153.1 |
180.0 |
| CB |
SG |
CD |
HD1 |
273.2 |
300.0 |
| CB |
SG |
CD |
HD2 |
33.1 |
60.1 |
| HB1 |
CB |
CA |
HA |
118.1 |
180.0 |
| CA |
CB |
HB1 |
SG |
239.2 |
240.0 |
| CA |
CB |
HB1 |
HB2 |
119.7 |
120.0 |
| SG |
CB |
HB1 |
HB2 |
240.4 |
240.0 |
| HB1 |
CB |
SG |
CD |
53.8 |
60.0 |
| HB2 |
CB |
CA |
HA |
238.1 |
300.0 |
| CA |
CB |
HB2 |
SG |
120.7 |
120.0 |
| CA |
CB |
HB2 |
HB1 |
240.3 |
240.0 |
| SG |
CB |
HB2 |
HB1 |
119.6 |
120.0 |
| HB2 |
CB |
SG |
CD |
293.8 |
300.0 |
| CD |
SG |
CB |
HB1 |
53.8 |
60.0 |
| CD |
SG |
CB |
HB2 |
293.8 |
300.0 |
| CE |
CD |
SG |
HD1 |
240.0 |
240.0 |
| CE |
CD |
SG |
HD2 |
120.0 |
119.9 |
| SG |
CD |
CE |
B |
174.3 |
180.0 |
| SG |
CD |
CE |
HE1 |
294.3 |
300.0 |
| SG |
CD |
CE |
HE2 |
54.2 |
60.1 |
| HD1 |
CD |
SG |
HD2 |
240.0 |
239.9 |
| SG |
CD |
CE |
HD1 |
120.0 |
120.0 |
| SG |
CD |
CE |
HD2 |
240.0 |
240.1 |
| HD1 |
CD |
CE |
HD2 |
120.0 |
120.1 |
| B |
CE |
CD |
HE1 |
240.0 |
240.0 |
| B |
CE |
CD |
HE2 |
120.0 |
119.9 |
| CD |
CE |
B |
O1 |
95.7 |
60.0 |
| CD |
CE |
B |
O2 |
215.1 |
180.0 |
| CD |
CE |
B |
O3 |
333.9 |
300.0 |
| HE1 |
CE |
CD |
HE2 |
240.0 |
240.0 |
| SG |
CD |
HD1 |
CE |
240.3 |
240.1 |
| SG |
CD |
HD1 |
HD2 |
120.1 |
120.0 |
| CE |
CD |
HD1 |
HD2 |
239.9 |
240.0 |
| HD1 |
CD |
CE |
B |
54.2 |
60.0 |
| HD1 |
CD |
CE |
HE1 |
174.2 |
180.1 |
| HD1 |
CD |
CE |
HE2 |
294.2 |
300.1 |
| SG |
CD |
HD2 |
CE |
119.7 |
119.9 |
| SG |
CD |
HD2 |
HD1 |
239.9 |
240.0 |
| CE |
CD |
HD2 |
HD1 |
120.2 |
120.1 |
| HD2 |
CD |
CE |
B |
294.3 |
299.9 |
| HD2 |
CD |
CE |
HE1 |
54.3 |
59.9 |
| HD2 |
CD |
CE |
HE2 |
174.2 |
180.0 |
| B |
CE |
CD |
HD1 |
54.2 |
60.0 |
| B |
CE |
CD |
HD2 |
294.3 |
299.9 |
| CD |
CE |
B |
HE1 |
120.0 |
120.1 |
| CD |
CE |
B |
HE2 |
240.0 |
240.1 |
| HE1 |
CE |
B |
HE2 |
120.0 |
120.0 |
| O1 |
B |
CE |
O2 |
240.6 |
240.0 |
| O1 |
B |
CE |
O3 |
121.8 |
120.0 |
| CE |
B |
O1 |
HO1 |
180.0 |
180.0 |
| O2 |
B |
CE |
O3 |
241.2 |
240.0 |
| CE |
B |
O2 |
HO2 |
180.0 |
300.0 |
| CE |
B |
O3 |
HO3 |
180.0 |
60.1 |
| HE1 |
CE |
CD |
HD1 |
174.2 |
180.1 |
| HE1 |
CE |
CD |
HD2 |
54.3 |
59.9 |
| CD |
CE |
HE1 |
B |
235.5 |
240.0 |
| CD |
CE |
HE1 |
HE2 |
117.7 |
120.0 |
| B |
CE |
HE1 |
HE2 |
242.2 |
240.0 |
| HE1 |
CE |
B |
O1 |
335.7 |
300.0 |
| HE1 |
CE |
B |
O2 |
95.1 |
60.0 |
| HE1 |
CE |
B |
O3 |
213.9 |
180.0 |
| HE2 |
CE |
CD |
HD1 |
294.2 |
300.1 |
| HE2 |
CE |
CD |
HD2 |
174.2 |
180.0 |
| CD |
CE |
HE2 |
B |
124.5 |
119.9 |
| CD |
CE |
HE2 |
HE1 |
242.3 |
239.9 |
| B |
CE |
HE2 |
HE1 |
117.8 |
120.0 |
| HE2 |
CE |
B |
O1 |
215.7 |
180.0 |
| HE2 |
CE |
B |
O2 |
335.1 |
300.0 |
| HE2 |
CE |
B |
O3 |
93.9 |
59.9 |
| O1 |
B |
CE |
HE1 |
335.7 |
300.0 |
| O1 |
B |
CE |
HE2 |
215.7 |
180.0 |
| CE |
B |
O1 |
O2 |
120.7 |
120.0 |
| CE |
B |
O1 |
O3 |
235.6 |
240.0 |
| O2 |
B |
O1 |
O3 |
115.0 |
120.1 |
| O1 |
B |
O2 |
HO2 |
303.1 |
60.0 |
| O1 |
B |
O3 |
HO3 |
54.9 |
300.1 |
| O2 |
B |
CE |
HE1 |
95.1 |
60.0 |
| O2 |
B |
CE |
HE2 |
335.1 |
300.0 |
| CE |
B |
O2 |
O1 |
236.9 |
240.0 |
| CE |
B |
O2 |
O3 |
121.8 |
120.0 |
| O1 |
B |
O2 |
O3 |
244.9 |
239.9 |
| O2 |
B |
O1 |
HO1 |
59.3 |
60.0 |
| O2 |
B |
O3 |
HO3 |
300.1 |
180.0 |
| O3 |
B |
CE |
HE1 |
213.9 |
180.0 |
| O3 |
B |
CE |
HE2 |
93.9 |
59.9 |
| CE |
B |
O3 |
O1 |
125.1 |
120.0 |
| CE |
B |
O3 |
O2 |
239.9 |
240.0 |
| O1 |
B |
O3 |
O2 |
114.9 |
120.1 |
| O3 |
B |
O1 |
HO1 |
304.3 |
299.9 |
| O3 |
B |
O2 |
HO2 |
58.2 |
180.0 |
| HO1 |
O1 |
B |
O2 |
59.3 |
60.0 |
| HO1 |
O1 |
B |
O3 |
304.3 |
299.9 |
| HO2 |
O2 |
B |
O3 |
58.2 |
180.0 |