PDB Chemical Component S29

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for S29

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.388 1.383
C1 C6 1.384 1.382
C2 C3 1.387 1.382
C3 C4 1.387 1.383
C4 C5 1.392 1.382
C5 C6 1.386 1.383
C6 C7 1.515 1.507
C7 S8 1.666 1.813
S8 N9 1.602 1.656
S8 O13 1.433 1.421
S8 O14 1.437 1.422
N9 C10 1.448 1.465
C10 C11 1.501 1.508
C10 C33 1.525 1.530
C11 N12 1.329 1.348
C11 O15 1.220 1.212
N12 C16 1.459 1.470
N12 C23 1.460 1.475
C16 C17 1.500 1.507
C16 C21 1.524 1.544
C17 O18 1.220 1.213
C17 N19 1.332 1.348
N19 C20 1.458 1.465
C20 C24 1.511 1.507
C21 C22 1.519 1.551
C22 C23 1.520 1.551
C24 C25 1.389 1.384
C24 C31 1.390 1.383
C25 C27 1.390 1.380
C26 C28 1.500 1.481
C26 N30 1.261 1.304
C26 N32 1.330 1.378
C27 C28 1.389 1.394
C28 C29 1.389 1.395
C29 C31 1.390 1.380
C1 H1 1.080 1.080
C2 H2 1.080 1.080
C3 H3 1.080 1.080
C4 H4 1.080 1.080
C5 H5 1.080 1.079
C7 H7 1.100 1.090
C7 H7A 1.100 1.090
N9 HN9 1.000 0.970
C10 H10 1.100 1.090
C16 H16 1.100 1.090
N19 HN19 0.999 0.970
C20 H20 1.100 1.091
C20 H20A 1.100 1.090
C21 H21 1.101 1.090
C21 H21A 1.100 1.090
C22 H22 1.100 1.090
C22 H22A 1.100 1.089
C23 H23 1.100 1.090
C23 H23A 1.100 1.089
C25 H25 1.080 1.080
C27 H27 1.080 1.080
C29 H29 1.081 1.080
N30 HN30 1.000 0.970
C31 H31 1.080 1.080
N32 HN32 1.000 0.969
N32 HN3A 0.999 0.970
C33 H33 1.100 1.090
C33 H33A 1.100 1.090
C33 H33B 1.100 1.090

Bond Angles for S29

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 120.1 120.0
C2 C1 H1 119.8 120.0
C1 C2 H2 119.9 120.1
C2 C3 C4 119.7 120.0
C3 C2 H2 119.9 120.0
C2 C3 H3 120.2 120.1
C3 C4 C5 120.0 120.0
C4 C3 H3 120.1 119.9
C3 C4 H4 120.0 120.0
C5 C4 H4 120.0 120.0
C4 C5 H5 119.9 120.0
C6 C7 H7 108.7 109.4
C6 C7 H7A 108.7 109.5
C7 S8 N9 108.1 104.4
C7 S8 O13 109.2 110.5
C7 S8 O14 110.6 110.5
S8 C7 H7 108.7 109.5
S8 C7 H7A 108.7 109.5
O13 S8 N9 108.2 104.3
O14 S8 N9 109.6 104.3
S8 N9 C10 120.3 120.0
S8 N9 HN9 106.0 120.0
O13 S8 O14 111.0 121.0
N9 C10 C11 110.9 109.4
N9 C10 C33 109.8 109.5
C10 N9 HN9 106.0 120.0
N9 C10 H10 108.3 109.5
C33 C10 C11 109.3 109.5
C10 C11 N12 117.1 120.0
C10 C11 O15 120.2 120.0
C11 C10 H10 108.7 109.5
C33 C10 H10 109.8 109.5
C10 C33 H33 109.5 109.4
C10 C33 H33A 109.4 109.5
C10 C33 H33B 109.5 109.5
O15 C11 N12 122.7 120.0
C11 N12 C16 120.3 125.6
C11 N12 C23 127.4 125.6
C16 N12 C23 112.4 108.7
N12 C16 C17 113.2 109.9
N12 C16 C21 104.2 107.2
N12 C16 H16 110.3 109.9
N12 C23 C22 103.2 104.7
N12 C23 H23 111.6 110.3
N12 C23 H23A 111.6 110.4
C17 C16 C21 108.4 109.9
C16 C17 O18 119.3 120.0
C16 C17 N19 118.3 120.0
C17 C16 H16 106.2 109.9
C16 C21 C22 107.3 103.0
C21 C16 H16 114.8 110.0
C16 C21 H21 110.2 110.7
C16 C21 H21A 110.2 110.7
O18 C17 N19 122.5 120.0
C17 N19 C20 125.7 120.0
C17 N19 HN19 117.1 120.0
N19 C20 C24 109.6 109.5
C20 N19 HN19 117.2 120.1
N19 C20 H20 109.5 109.5
N19 C20 H20A 109.4 109.5
C20 C24 C25 119.8 119.9
C20 C24 C31 120.2 119.9
C24 C20 H20 109.4 109.5
C24 C20 H20A 109.5 109.4
C21 C22 C23 106.7 101.5
C22 C21 H21 110.2 110.8
C22 C21 H21A 110.2 110.7
C21 C22 H22 110.4 111.0
C21 C22 H22A 110.4 111.0
C23 C22 H22 110.4 111.2
C23 C22 H22A 110.4 110.9
C22 C23 H23 111.6 110.5
C22 C23 H23A 111.6 110.4
C31 C24 C25 120.1 120.2
C24 C25 C27 119.9 120.1
C24 C25 H25 120.0 119.9
C24 C31 H31 120.0 120.0
C25 C27 H27 120.0 120.1
N30 C26 N32 120.0 120.0
C26 N30 HN30 112.0 120.0
C26 N32 HN32 120.0 120.0
C26 N32 HN3A 120.0 120.0
C28 C29 H29 120.1 120.1
C29 C31 H31 120.0 119.9
H7 C7 H7A 110.3 109.5
H20 C20 H20A 109.5 109.5
H21 C21 H21A 108.7 110.8
H22 C22 H22A 108.5 110.9
H23 C23 H23A 107.2 110.4
HN32 N32 HN3A 120.0 120.0
H33 C33 H33A 109.5 109.5
H33 C33 H33B 109.5 109.5
H33A C33 H33B 109.5 109.5

Torsion Angles for S29

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 C4 359.5 -0.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 H3 179.5 179.9
C1 C6 C7 H7 13.5 210.0
C1 C6 C7 H7A 133.5 330.0
C3 C2 C1 H1 180.9 179.7
C1 C2 C3 H2 180.0 180.0
C2 C3 C4 C5 0.5 359.9
C4 C3 C2 H3 180.0 180.1
C2 C3 C4 H4 180.4 179.9
C4 C3 C2 H2 179.5 180.0
C2 C3 C4 H3 180.0 179.9
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 H5 179.2 179.9
C5 C4 C3 H3 180.5 180.0
C3 C4 C5 H4 180.0 180.0
C5 C6 C7 H7 194.7 29.9
C5 C6 C7 H7A 314.8 149.8
C6 C7 S8 N9 187.9 180.0
C6 C7 S8 O13 70.4 291.6
C6 C7 S8 O14 307.9 68.4
S8 C7 C6 H7 240.0 240.0
S8 C7 C6 H7A 120.0 120.0
H7 C7 C6 H7A 240.0 240.0
C6 C7 S8 H7 120.0 120.0
C6 C7 S8 H7A 240.0 240.0
O13 S8 C7 N9 242.5 111.7
O14 S8 C7 N9 120.0 248.4
C7 S8 N9 C10 86.0 65.0
C7 S8 N9 HN9 206.0 244.9
O13 S8 C7 O14 122.4 223.3
H7 C7 S8 H7A 120.1 120.0
C7 S8 N9 O13 241.9 116.1
C7 S8 N9 O14 120.6 243.9
N9 S8 C7 H7 67.9 60.0
N9 S8 C7 H7A 307.9 300.0
O13 S8 N9 O14 238.8 127.9
S8 N9 C10 C11 89.6 145.0
S8 N9 C10 C33 210.5 265.0
C10 N9 S8 HN9 240.0 180.1
S8 N9 C10 H10 330.4 25.0
C7 S8 O13 N9 117.5 248.2
C7 S8 O13 O14 237.9 131.5
O13 S8 C7 H7 310.4 171.7
O13 S8 C7 H7A 190.3 51.7
O14 S8 O13 N9 239.6 116.8
O13 S8 N9 C10 204.1 309.0
O13 S8 N9 HN9 324.2 128.8
C7 S8 O14 N9 240.9 111.7
C7 S8 O14 O13 121.3 228.5
O14 S8 C7 H7 188.0 308.4
O14 S8 C7 H7A 67.9 188.4
O13 S8 O14 N9 119.6 243.2
O14 S8 N9 C10 325.4 181.1
O14 S8 N9 HN9 85.4 1.0
S8 N9 C10 HN9 120.0 179.9
C33 C10 N9 C11 120.9 120.0
N9 C10 C11 N12 218.0 180.0
N9 C10 C11 O15 37.6 360.0
C11 C10 N9 H10 119.2 120.0
C33 C10 N9 H10 240.1 240.0
N9 C10 C33 H33 180.0 300.0
N9 C10 C33 H33A 300.0 60.0
N9 C10 C33 H33B 60.0 180.0
N9 C10 C11 C33 121.2 120.0
C11 C10 N9 HN9 329.5 325.1
N9 C10 C11 H10 241.1 240.0
C33 C10 C11 H10 119.9 120.0
C11 C10 C33 H33 301.9 60.0
C11 C10 C33 H33A 61.9 180.0
C11 C10 C33 H33B 181.8 300.0
O15 C11 C10 N12 179.7 180.0
C10 C11 N12 C16 180.4 180.0
C10 C11 N12 C23 359.5 359.7
N9 C10 C33 C11 238.1 240.0
C33 C10 N9 HN9 90.5 85.1
N9 C10 C33 H10 118.9 120.0
C33 C10 C11 N12 96.8 60.0
C33 C10 C11 O15 276.4 240.0
C11 C10 C33 H10 240.8 240.0
H33 C33 C10 H33A 240.0 240.0
H33 C33 C10 H33B 120.0 120.0
H33A C33 C10 H33B 240.0 240.0
C10 C11 N12 O15 179.6 180.0
N12 C11 C10 H10 336.9 300.0
C16 N12 C11 C23 180.9 180.2
C11 N12 C16 C17 277.4 300.5
C11 N12 C16 C21 159.9 181.1
C11 N12 C16 H16 36.2 61.5
C11 N12 C23 C22 206.9 155.8
C11 N12 C23 H23 327.0 274.7
C11 N12 C23 H23A 86.9 37.1
C10 C11 O15 N12 180.4 180.0
O15 C11 C10 H10 156.5 120.0
O15 C11 N12 C16 0.8 359.9
O15 C11 N12 C23 179.9 179.7
C11 N12 C16 C23 179.2 179.8
C16 N12 C23 C22 26.1 335.6
C16 N12 C23 H23 146.1 94.5
C16 N12 C23 H23A 266.0 216.8
C17 C16 N12 C21 117.5 119.4
N12 C16 C17 O18 185.6 0.0
N12 C16 C17 N19 6.8 180.0
C17 C16 N12 H16 241.3 239.0
N12 C16 C21 C22 4.2 22.2
C21 C16 N12 H16 123.7 119.6
N12 C16 C21 H21 124.2 140.6
N12 C16 C21 H21A 244.2 263.8
C11 N12 C23 C16 180.9 180.2
C23 N12 C16 C17 98.2 120.7
C23 N12 C16 C21 340.7 1.3
C23 N12 C16 H16 217.0 241.7
C21 C22 C23 N12 338.3 37.2
N12 C23 C22 H22 218.3 279.2
N12 C23 C22 H22A 98.3 155.3
C22 C23 N12 H23 240.0 241.1
C22 C23 N12 H23A 120.0 118.8
H23 C23 N12 H23A 240.0 237.7
C17 C16 N12 C23 98.2 120.7
N12 C16 C17 C21 244.9 242.2
N12 C16 C17 H16 121.1 121.0
C17 C16 C21 C22 243.4 262.8
C21 C16 C17 H16 236.1 238.8
C17 C16 C21 H21 3.5 21.2
C17 C16 C21 H21A 123.4 144.4
O18 C17 C16 N19 178.8 180.1
C16 C17 N19 C20 180.4 180.1
C16 C17 N19 HN19 0.4 0.0
C21 C16 N12 C23 340.7 1.3
N12 C16 C21 C17 120.8 119.4
N12 C16 C21 H16 239.3 240.5
C21 C16 C17 O18 300.7 117.8
C21 C16 C17 N19 121.8 297.8
C17 C16 C21 H16 118.5 121.1
C16 C21 C22 C23 11.0 324.4
C22 C21 C16 H21 240.0 241.6
C22 C21 C16 H21A 120.0 118.4
C16 C21 C22 H22 131.0 82.6
C16 C21 C22 H22A 251.0 206.4
H21 C21 C16 H21A 240.0 236.8
O18 C17 C16 C21 300.7 117.8
C16 C17 O18 N19 181.2 179.9
O18 C17 C16 H16 64.5 239.0
O18 C17 N19 C20 1.6 360.0
O18 C17 N19 HN19 181.6 180.0
N19 C17 C16 C21 121.8 297.8
C16 C17 N19 O18 178.8 180.1
N19 C17 C16 H16 245.7 59.0
C17 N19 C20 C24 245.9 180.0
C20 N19 C17 HN19 180.0 180.0
C17 N19 C20 H20 5.9 300.0
C17 N19 C20 H20A 125.9 60.0
C17 N19 C20 HN19 180.0 180.0
N19 C20 C24 C25 350.3 90.0
N19 C20 C24 C31 169.9 269.7
C24 C20 N19 H20 240.0 240.0
C24 C20 N19 H20A 120.0 120.0
H20 C20 N19 H20A 240.0 240.0
C24 C20 N19 HN19 65.9 0.0
N19 C20 C24 H20 120.0 120.0
N19 C20 C24 H20A 240.0 239.9
C31 C24 C20 C25 179.6 179.7
C20 C24 C25 C27 179.9 180.1
C20 C24 C25 H25 359.9 360.0
C20 C24 C31 H31 0.0 360.0
H20 C20 C24 H20A 120.0 120.0
N12 C23 C22 C21 338.3 37.2
C22 C21 C16 H16 124.9 141.7
C16 C21 C22 H21 120.0 118.4
C16 C21 C22 H21A 240.0 241.7
C23 C22 C21 H22 240.0 241.8
C23 C22 C21 H22A 120.0 118.0
C21 C22 C23 H23 218.3 278.5
C21 C22 C23 H23A 98.3 156.0
H21 C21 C22 H21A 120.0 123.3
H22 C22 C21 H22A 240.0 236.2
N12 C23 C22 H23 120.0 118.8
N12 C23 C22 H23A 240.0 241.2
C23 C22 C21 H21 251.0 206.0
C23 C22 C21 H21A 131.0 82.7
C21 C22 C23 H22 120.0 118.1
C21 C22 C23 H22A 240.0 242.0
H22 C22 C23 H22A 120.0 123.9
H23 C23 C22 H23A 120.0 122.4
C20 C24 C25 C31 179.6 179.7
C25 C24 C20 H20 230.2 330.0
C25 C24 C20 H20A 110.3 210.0
C25 C24 C31 H31 179.6 179.7
C24 C25 C27 H27 179.6 180.0
C20 C24 C31 C25 180.4 180.3
C31 C24 C20 H20 49.9 149.7
C31 C24 C20 H20A 289.9 29.8
C31 C24 C25 C27 0.3 0.4
C31 C24 C25 H25 180.3 180.3
C29 C31 C24 H31 180.0 179.8
C24 C25 C27 H25 180.0 179.9
C26 C28 C29 H29 0.0 359.9
N30 C26 N32 HN32 360.0 180.0
N30 C26 N32 HN3A 180.0 0.0
N32 C26 N30 HN30 360.0 0.0
HN32 N32 C26 HN3A 179.9 180.0
C24 C25 C27 C28 359.7 359.9
C27 C28 C29 H29 179.3 179.9
C28 C29 C31 H31 180.6 180.3
C29 C31 C24 C25 359.6 359.4
C24 C31 C29 H31 180.0 180.2
H1 C1 C2 C3 180.9 179.7
H1 C1 C2 H2 0.9 359.7
C1 C2 H2 C3 180.0 180.0
H2 C2 C1 H1 0.9 359.7
H2 C2 C3 C4 179.5 180.0
H2 C2 C3 H3 359.5 359.9
C2 C3 H3 C4 180.0 180.1
H3 C3 C2 H2 359.5 359.9
H3 C3 C4 C5 180.5 180.0
H3 C3 C4 H4 0.4 360.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C3 H3 0.4 360.0
H4 C4 C5 H5 359.2 360.0
H5 C5 C4 H4 359.2 360.0
C6 C7 H7 H7A 119.0 120.0
H7 C7 S8 N9 67.9 60.0
H7 C7 S8 O13 310.4 171.7
H7 C7 S8 O14 188.0 308.4
S8 C7 H7 H7A 241.0 240.0
C6 C7 H7A H7 241.0 240.1
H7A C7 S8 N9 307.9 300.0
H7A C7 S8 O13 190.3 51.7
H7A C7 S8 O14 67.9 188.4
S8 C7 H7A H7 119.1 120.0
S8 N9 HN9 C10 231.1 180.1
HN9 N9 C10 C11 329.5 325.1
HN9 N9 C10 C33 90.5 85.1
HN9 N9 C10 H10 210.4 205.1
N9 C10 H10 C11 120.5 120.0
N9 C10 H10 C33 240.1 240.0
H10 C10 N9 HN9 210.4 205.1
C33 C10 H10 C11 240.4 240.0
H10 C10 C11 N12 336.9 300.0
H10 C10 C11 O15 156.5 120.0
H10 C10 C33 H33 61.1 180.0
H10 C10 C33 H33A 181.1 300.0
H10 C10 C33 H33B 301.1 60.0
H16 C16 N12 C23 217.0 241.7
N12 C16 H16 C17 237.1 239.0
N12 C16 H16 C21 117.3 117.9
C17 C16 H16 C21 240.2 238.9
H16 C16 C17 O18 64.5 239.0
H16 C16 C17 N19 245.7 59.0
H16 C16 C21 C22 124.9 141.7
H16 C16 C21 H21 244.9 260.1
H16 C16 C21 H21A 4.9 23.3
C17 N19 HN19 C20 180.0 180.0
HN19 N19 C20 C24 65.9 0.0
HN19 N19 C20 H20 185.9 120.0
HN19 N19 C20 H20A 305.9 240.1
N19 C20 H20 C24 239.9 240.0
H20 C20 N19 HN19 185.9 120.0
N19 C20 H20 H20A 119.9 120.1
H20 C20 C24 C25 230.2 330.0
H20 C20 C24 C31 49.9 149.7
C24 C20 H20 H20A 240.0 240.0
N19 C20 H20A C24 120.1 120.0
H20A C20 N19 HN19 305.9 240.1
N19 C20 H20A H20 240.0 240.0
H20A C20 C24 C25 110.3 210.0
H20A C20 C24 C31 289.9 29.8
C24 C20 H20A H20 119.9 120.0
C16 C21 H21 C22 241.7 246.5
H21 C21 C16 H16 244.9 260.1
C16 C21 H21 H21A 120.9 123.2
H21 C21 C22 C23 251.0 206.0
C22 C21 H21 H21A 239.1 236.7
H21 C21 C22 H22 11.0 324.2
H21 C21 C22 H22A 131.0 88.0
C16 C21 H21A C22 118.2 113.5
H21A C21 C16 H16 4.9 23.3
C16 C21 H21A H21 239.1 236.8
H21A C21 C22 C23 131.0 82.7
C22 C21 H21A H21 120.9 123.3
H21A C21 C22 H22 251.0 200.9
H21A C21 C22 H22A 11.0 324.7
C21 C22 H22 C23 242.3 247.8
H22 C22 C21 H21 11.0 324.2
H22 C22 C21 H21A 251.0 200.9
C21 C22 H22 H22A 121.1 123.9
C23 C22 H22 H22A 238.8 236.1
H22 C22 C23 H23 98.3 160.4
H22 C22 C23 H23A 338.3 37.9
C21 C22 H22A C23 117.8 112.1
H22A C22 C21 H21 131.0 88.0
H22A C22 C21 H21A 11.0 324.7
C21 C22 H22A H22 238.9 236.2
C23 C22 H22A H22 121.1 124.1
H22A C22 C23 H23 338.3 36.5
H22A C22 C23 H23A 218.3 274.0
N12 C23 H23 C22 245.1 244.7
N12 C23 H23 H23A 122.5 122.3
H23 C23 C22 H22 98.3 160.4
H23 C23 C22 H22A 338.3 36.5
C22 C23 H23 H23A 237.4 237.6
N12 C23 H23A C22 114.9 115.3
N12 C23 H23A H23 237.5 237.7
H23A C23 C22 H22 338.3 37.9
H23A C23 C22 H22A 218.3 274.0
C22 C23 H23A H23 122.6 122.5
C24 C25 H25 C27 180.0 180.1
H25 C25 C27 H27 359.6 0.1
H29 C29 C31 H31 0.6 0.1
HN30 N30 C26 N32 360.0 0.0
H31 C31 C24 C25 179.6 179.7
C26 N32 HN32 HN3A 180.1 180.0
C26 N32 HN3A HN32 179.9 180.0
H33 C33 C10 C11 301.9 60.0
H33 C33 C10 H10 61.1 180.0
C10 C33 H33 H33A 120.0 120.0
C10 C33 H33 H33B 240.0 240.0
H33A C33 H33 H33B 120.0 120.0
H33A C33 C10 C11 61.9 180.0
H33A C33 C10 H10 181.1 300.0
C10 C33 H33A H33 240.0 240.0
C10 C33 H33A H33B 120.0 120.0
H33 C33 H33A H33B 240.0 240.0
H33B C33 C10 C11 181.8 300.0
H33B C33 C10 H10 301.1 60.0
C10 C33 H33B H33 120.0 119.9
C10 C33 H33B H33A 240.0 240.0
H33 C33 H33B H33A 120.0 120.0