PDB Chemical Component RZJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RZJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C04 |
C05 |
1.518 |
1.530 |
| C04 |
C03 |
1.512 |
1.534 |
| C07 |
C08 |
1.395 |
1.380 |
| C07 |
C06 |
1.411 |
1.386 |
| C08 |
C09 |
1.412 |
1.383 |
| C05 |
C06 |
1.557 |
1.508 |
| C06 |
C11 |
1.402 |
1.383 |
| O14 |
S12 |
1.470 |
1.421 |
| N15 |
S12 |
1.708 |
1.655 |
| C03 |
N02 |
1.435 |
1.464 |
| C09 |
S12 |
1.800 |
1.763 |
| C09 |
C10 |
1.396 |
1.378 |
| C11 |
C10 |
1.411 |
1.396 |
| C11 |
N02 |
1.473 |
1.395 |
| S12 |
O13 |
1.464 |
1.421 |
| N02 |
C01 |
1.447 |
1.470 |
| C10 |
H1 |
1.080 |
1.080 |
| C01 |
H2 |
1.100 |
1.090 |
| C01 |
H3 |
1.100 |
1.090 |
| C01 |
H4 |
1.100 |
1.091 |
| C03 |
H5 |
1.100 |
1.090 |
| C03 |
H6 |
1.100 |
1.090 |
| C04 |
H7 |
1.100 |
1.090 |
| C04 |
H8 |
1.101 |
1.090 |
| C05 |
H9 |
1.100 |
1.090 |
| C05 |
H10 |
1.100 |
1.090 |
| C07 |
H11 |
1.080 |
1.080 |
| C08 |
H12 |
1.080 |
1.080 |
| N15 |
H13 |
1.000 |
0.970 |
| N15 |
H14 |
1.000 |
0.970 |
Bond Angles for RZJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C05 |
C06 |
111.2 |
109.6 |
| C05 |
C04 |
H7 |
108.0 |
109.8 |
| C05 |
C04 |
H8 |
108.0 |
109.8 |
| C04 |
C05 |
H9 |
109.0 |
109.4 |
| C04 |
C05 |
H10 |
109.0 |
109.4 |
| C04 |
C03 |
N02 |
117.3 |
108.6 |
| C04 |
C03 |
H5 |
107.5 |
109.6 |
| C04 |
C03 |
H6 |
107.5 |
109.8 |
| C07 |
C08 |
C09 |
118.7 |
119.9 |
| C08 |
C07 |
H11 |
120.1 |
119.8 |
| C07 |
C08 |
H12 |
120.6 |
120.1 |
| C07 |
C06 |
C11 |
121.3 |
119.8 |
| C08 |
C09 |
S12 |
120.7 |
120.0 |
| C09 |
C08 |
H12 |
120.7 |
120.0 |
| C05 |
C06 |
C11 |
118.1 |
122.1 |
| C06 |
C05 |
H9 |
109.1 |
109.4 |
| C06 |
C05 |
H10 |
109.1 |
109.4 |
| C06 |
C11 |
N02 |
119.0 |
122.9 |
| N15 |
S12 |
O14 |
113.0 |
106.4 |
| C09 |
S12 |
O14 |
110.6 |
106.4 |
| C09 |
S12 |
N15 |
110.3 |
107.2 |
| N15 |
S12 |
O13 |
113.3 |
106.4 |
| S12 |
N15 |
H13 |
109.5 |
120.1 |
| S12 |
N15 |
H14 |
109.4 |
120.0 |
| C03 |
N02 |
C11 |
119.3 |
113.1 |
| N02 |
C03 |
H5 |
107.5 |
109.6 |
| N02 |
C03 |
H6 |
107.5 |
109.5 |
| C09 |
S12 |
O13 |
107.4 |
106.4 |
| C09 |
C10 |
H1 |
120.4 |
119.8 |
| C11 |
C10 |
H1 |
120.3 |
119.8 |
| N02 |
C01 |
H2 |
109.5 |
109.4 |
| N02 |
C01 |
H3 |
109.5 |
109.5 |
| N02 |
C01 |
H4 |
109.4 |
109.4 |
| H2 |
C01 |
H3 |
109.5 |
109.6 |
| H2 |
C01 |
H4 |
109.5 |
109.4 |
| H3 |
C01 |
H4 |
109.5 |
109.5 |
| H5 |
C03 |
H6 |
109.5 |
109.7 |
| H7 |
C04 |
H8 |
109.5 |
109.7 |
| H9 |
C05 |
H10 |
109.5 |
109.5 |
| H13 |
N15 |
H14 |
109.5 |
119.9 |
Torsion Angles for RZJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C05 |
C04 |
C03 |
N02 |
17.6 |
291.8 |
| C05 |
C04 |
C03 |
H5 |
138.7 |
51.5 |
| C05 |
C04 |
C03 |
H6 |
256.5 |
172.0 |
| C04 |
C05 |
C06 |
C11 |
35.9 |
344.3 |
| C06 |
C05 |
C04 |
H9 |
239.7 |
240.0 |
| C06 |
C05 |
C04 |
H10 |
120.3 |
120.0 |
| H7 |
C04 |
C05 |
H8 |
241.7 |
120.7 |
| H9 |
C05 |
C04 |
H10 |
240.5 |
240.0 |
| C04 |
C03 |
N02 |
C11 |
20.8 |
53.4 |
| N02 |
C03 |
C04 |
H5 |
238.9 |
240.3 |
| N02 |
C03 |
C04 |
H6 |
121.1 |
119.8 |
| H5 |
C03 |
C04 |
H6 |
242.3 |
239.5 |
| C08 |
C07 |
C06 |
C11 |
0.2 |
0.0 |
| C07 |
C08 |
C09 |
S12 |
179.7 |
180.2 |
| C09 |
C08 |
C07 |
H12 |
180.0 |
179.8 |
| C05 |
C06 |
C07 |
C11 |
179.4 |
180.0 |
| C07 |
C06 |
C05 |
H9 |
96.3 |
44.3 |
| C07 |
C06 |
C05 |
H10 |
336.8 |
284.3 |
| C07 |
C06 |
C11 |
N02 |
179.9 |
180.9 |
| C09 |
C08 |
C07 |
H11 |
179.9 |
180.0 |
| C07 |
C08 |
C09 |
H12 |
180.0 |
180.2 |
| C08 |
C09 |
S12 |
O14 |
116.2 |
336.4 |
| C08 |
C09 |
S12 |
N15 |
350.4 |
90.0 |
| C08 |
C09 |
S12 |
O13 |
226.5 |
203.5 |
| C08 |
C09 |
C10 |
H1 |
179.8 |
180.0 |
| C06 |
C05 |
C04 |
H7 |
76.5 |
287.7 |
| C06 |
C05 |
C04 |
H8 |
194.7 |
167.0 |
| C04 |
C05 |
C06 |
H9 |
120.2 |
120.0 |
| C04 |
C05 |
C06 |
H10 |
239.7 |
240.0 |
| C07 |
C06 |
C05 |
C11 |
180.6 |
180.0 |
| C05 |
C06 |
C11 |
N02 |
0.5 |
0.9 |
| H9 |
C05 |
C06 |
H10 |
119.5 |
120.0 |
| C11 |
C06 |
C05 |
H9 |
275.7 |
224.3 |
| C11 |
C06 |
C05 |
H10 |
156.2 |
104.3 |
| C03 |
N02 |
C11 |
C06 |
329.3 |
339.7 |
| C06 |
C11 |
C10 |
H1 |
180.3 |
179.7 |
| C09 |
S12 |
O14 |
N15 |
235.8 |
114.1 |
| N15 |
S12 |
O14 |
O13 |
238.1 |
123.0 |
| O14 |
S12 |
N15 |
H13 |
180.0 |
113.6 |
| O14 |
S12 |
N15 |
H14 |
300.0 |
293.5 |
| C09 |
S12 |
O14 |
O13 |
113.9 |
237.1 |
| C09 |
S12 |
N15 |
O14 |
124.4 |
246.5 |
| C09 |
S12 |
N15 |
O13 |
239.6 |
113.5 |
| H13 |
N15 |
S12 |
H14 |
240.0 |
180.0 |
| C04 |
C03 |
N02 |
H5 |
121.1 |
119.7 |
| C04 |
C03 |
N02 |
H6 |
238.9 |
240.1 |
| C06 |
C11 |
N02 |
C03 |
329.3 |
339.7 |
| C03 |
N02 |
C01 |
H2 |
180.0 |
52.1 |
| C03 |
N02 |
C01 |
H3 |
300.0 |
172.2 |
| C03 |
N02 |
C01 |
H4 |
60.0 |
292.2 |
| H5 |
C03 |
N02 |
H6 |
117.8 |
120.4 |
| S12 |
C09 |
C08 |
H12 |
359.7 |
360.0 |
| N15 |
S12 |
C09 |
O14 |
234.2 |
113.6 |
| N15 |
S12 |
C09 |
O13 |
123.9 |
246.5 |
| C09 |
S12 |
N15 |
H13 |
304.4 |
0.0 |
| C09 |
S12 |
N15 |
H14 |
64.4 |
180.0 |
| S12 |
C09 |
C10 |
H1 |
0.2 |
359.9 |
| C11 |
C10 |
C09 |
H1 |
180.0 |
180.4 |
| C09 |
C10 |
C11 |
H1 |
180.0 |
179.6 |
| C11 |
N02 |
C03 |
H5 |
259.7 |
293.7 |
| C11 |
N02 |
C03 |
H6 |
141.9 |
173.3 |
| N02 |
C11 |
C10 |
H1 |
0.0 |
359.3 |
| C11 |
N02 |
C01 |
H2 |
335.6 |
178.9 |
| C11 |
N02 |
C01 |
H3 |
95.6 |
298.9 |
| C11 |
N02 |
C01 |
H4 |
215.6 |
58.9 |
| N15 |
S12 |
O13 |
O14 |
121.7 |
237.0 |
| C09 |
S12 |
O13 |
O14 |
243.8 |
122.9 |
| C09 |
S12 |
O13 |
N15 |
122.1 |
245.9 |
| O13 |
S12 |
N15 |
H13 |
64.8 |
246.5 |
| O13 |
S12 |
N15 |
H14 |
184.8 |
66.5 |
| H2 |
C01 |
N02 |
H3 |
240.0 |
239.9 |
| H2 |
C01 |
N02 |
H4 |
120.0 |
119.9 |
| H3 |
C01 |
N02 |
H4 |
240.0 |
240.0 |
| N02 |
C01 |
H2 |
H3 |
120.0 |
120.1 |
| N02 |
C01 |
H2 |
H4 |
240.0 |
240.1 |
| H3 |
C01 |
H2 |
H4 |
120.0 |
120.0 |
| N02 |
C01 |
H3 |
H2 |
240.0 |
240.0 |
| N02 |
C01 |
H3 |
H4 |
120.0 |
120.0 |
| H2 |
C01 |
H3 |
H4 |
240.0 |
240.0 |
| N02 |
C01 |
H4 |
H2 |
120.0 |
119.9 |
| N02 |
C01 |
H4 |
H3 |
240.0 |
240.0 |
| H2 |
C01 |
H4 |
H3 |
120.0 |
120.1 |
| C04 |
C03 |
H5 |
N02 |
232.9 |
240.9 |
| C04 |
C03 |
H5 |
H6 |
116.4 |
120.6 |
| H5 |
C03 |
N02 |
C11 |
259.7 |
293.7 |
| N02 |
C03 |
H5 |
H6 |
243.5 |
239.7 |
| C04 |
C03 |
H6 |
N02 |
127.1 |
119.2 |
| C04 |
C03 |
H6 |
H5 |
243.5 |
239.6 |
| H6 |
C03 |
N02 |
C11 |
141.9 |
173.3 |
| N02 |
C03 |
H6 |
H5 |
116.4 |
120.4 |
| H7 |
C04 |
C05 |
C06 |
76.5 |
287.7 |
| C05 |
C04 |
H7 |
H8 |
117.3 |
239.3 |
| H7 |
C04 |
C05 |
H9 |
196.7 |
47.7 |
| H7 |
C04 |
C05 |
H10 |
316.2 |
167.7 |
| H7 |
C04 |
C03 |
N02 |
256.7 |
51.4 |
| H7 |
C04 |
C03 |
H5 |
17.8 |
171.2 |
| H7 |
C04 |
C03 |
H6 |
135.6 |
291.7 |
| H8 |
C04 |
C05 |
C06 |
194.7 |
167.0 |
| C05 |
C04 |
H8 |
H7 |
242.7 |
120.8 |
| H8 |
C04 |
C05 |
H9 |
315.0 |
287.0 |
| H8 |
C04 |
C05 |
H10 |
74.5 |
46.9 |
| H8 |
C04 |
C03 |
N02 |
138.4 |
172.1 |
| H8 |
C04 |
C03 |
H5 |
259.6 |
291.9 |
| H8 |
C04 |
C03 |
H6 |
17.3 |
52.4 |
| C04 |
C05 |
H9 |
C06 |
238.4 |
239.8 |
| H9 |
C05 |
C04 |
H7 |
196.7 |
47.7 |
| H9 |
C05 |
C04 |
H8 |
315.0 |
287.0 |
| C04 |
C05 |
H9 |
H10 |
119.2 |
119.9 |
| H9 |
C05 |
C06 |
C11 |
275.7 |
224.3 |
| C06 |
C05 |
H9 |
H10 |
240.8 |
240.1 |
| C04 |
C05 |
H10 |
C06 |
121.6 |
120.1 |
| H10 |
C05 |
C04 |
H7 |
316.2 |
167.7 |
| H10 |
C05 |
C04 |
H8 |
74.5 |
46.9 |
| C04 |
C05 |
H10 |
H9 |
240.8 |
240.1 |
| H10 |
C05 |
C06 |
C11 |
156.2 |
104.3 |
| C06 |
C05 |
H10 |
H9 |
119.2 |
119.9 |
| H11 |
C07 |
C08 |
C09 |
179.9 |
180.0 |
| H11 |
C07 |
C08 |
H12 |
359.9 |
0.2 |
| H11 |
C07 |
C06 |
C11 |
180.3 |
179.7 |
| C07 |
C08 |
H12 |
C09 |
180.0 |
179.8 |
| H12 |
C08 |
C07 |
H11 |
359.9 |
0.2 |
| H12 |
C08 |
C09 |
S12 |
359.7 |
360.0 |
| H13 |
N15 |
S12 |
O14 |
180.0 |
113.6 |
| H13 |
N15 |
S12 |
O13 |
64.8 |
246.5 |
| S12 |
N15 |
H13 |
H14 |
120.0 |
180.0 |
| H14 |
N15 |
S12 |
O14 |
300.0 |
293.5 |
| H14 |
N15 |
S12 |
O13 |
184.8 |
66.5 |
| S12 |
N15 |
H14 |
H13 |
240.0 |
180.0 |