PDB Chemical Component RX0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RX0

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.401 1.393
C3 C1 1.397 1.393
C1 C19 1.502 1.484
C4 C2 1.400 1.380
C2 H2 1.080 1.080
C5 C3 1.397 1.380
C3 H3 1.080 1.081
C6 C4 1.391 1.383
C4 H4 1.080 1.080
C6 C5 1.405 1.383
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C33 C7 1.484 1.507
O8 C7 1.205 1.213
C7 N9 1.411 1.348
N9 C13 1.486 1.469
N9 C14 1.481 1.469
C14 C10 1.514 1.532
C10 C11 1.523 1.530
C10 H10 1.100 1.089
C10 H10A 1.100 1.091
C12 C11 1.523 1.526
C11 H11 1.100 1.090
C11 H11A 1.100 1.090
C13 C12 1.511 1.532
C12 C15 1.536 1.531
C12 H12 1.100 1.090
C13 H13 1.100 1.090
C13 H13A 1.100 1.089
C14 H14 1.100 1.090
C14 H14A 1.100 1.091
C23 C15 1.522 1.530
C15 C17 1.514 1.507
C15 O16 1.413 1.429
O16 HO16 0.950 0.966
C19 C17 1.401 1.393
C17 C18 1.408 1.380
C18 C20 1.392 1.383
C18 H18 1.080 1.080
C19 C21 1.401 1.393
C22 C20 1.392 1.384
C20 H20 1.080 1.080
C21 C22 1.387 1.379
C21 H21 1.080 1.080
C22 H22 1.080 1.080
C23 C24 1.542 1.530
C23 H23 1.100 1.090
C23 H23A 1.100 1.090
C25 C24 1.526 1.530
C24 H24 1.100 1.090
C24 H24A 1.100 1.090
C25 C26 1.521 1.530
C25 H25 1.100 1.090
C25 H25A 1.100 1.090
O27 C26 1.417 1.429
C26 H26 1.100 1.090
C26 H26A 1.100 1.090
C28 O27 1.426 1.429
C28 H28 1.100 1.090
C28 H28A 1.100 1.090
C28 H28B 1.100 1.090
C30 C29 1.512 1.543
C29 C33 1.518 1.549
C29 H29 1.100 1.090
C29 H29A 1.100 1.089
O34 C30 1.404 1.429
C30 C31 1.540 1.538
C30 H30 1.100 1.090
N35 C31 1.490 1.469
C31 C32 1.515 1.543
C31 H31 1.100 1.090
C32 C33 1.531 1.549
C32 H32 1.100 1.089
C32 H32A 1.100 1.090
C33 H33 1.100 1.091
O34 HO34 0.950 0.967
N35 HN35 1.000 1.009
N35 HN3A 1.000 1.009

Bond Angles for RX0

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C19 121.1 120.1
C3 C1 C19 120.4 120.2
C1 C19 C17 127.6 120.1
C1 C19 C21 113.7 120.2
C4 C2 H2 119.2 120.0
C5 C3 H3 119.9 120.0
C6 C4 H4 120.1 120.0
C6 C5 H5 119.4 120.0
O8 C7 N9 124.9 120.0
C7 N9 C13 116.4 120.7
C7 N9 C14 117.1 120.6
C13 N9 C14 114.8 118.7
N9 C13 C12 113.8 108.8
N9 C13 H13 108.0 109.6
N9 C13 H13A 108.0 109.6
N9 C14 C10 109.7 108.8
N9 C14 H14 109.4 109.6
N9 C14 H14A 109.4 109.6
C14 C10 H10 109.1 109.3
C14 C10 H10A 109.1 109.7
C11 C10 H10 109.1 109.6
C11 C10 H10A 109.1 109.5
C10 C11 H11 110.0 109.5
C10 C11 H11A 110.0 109.5
H10 C10 H10A 109.8 109.5
C12 C11 H11 110.0 109.5
C12 C11 H11A 110.0 109.5
H11 C11 H11A 108.9 109.4
C13 C12 C15 113.5 109.2
C13 C12 H12 109.3 109.7
C15 C12 H12 104.0 109.5
C12 C15 C17 108.7 109.5
C12 C15 O16 108.7 109.5
H13 C13 H13A 110.9 109.7
H14 C14 H14A 109.5 109.7
O16 C15 C17 111.7 109.5
C15 C17 C18 118.0 120.0
C15 O16 HO16 109.5 114.0
C17 C18 C20 122.2 120.1
C17 C18 H18 118.9 120.0
C20 C18 H18 118.9 119.9
C18 C20 H20 120.3 119.9
C19 C21 C22 122.8 119.9
C19 C21 H21 118.6 120.0
C22 C20 H20 120.3 119.9
C22 C21 H21 118.6 120.1
C21 C22 H22 120.7 120.0
C24 C23 H23 107.8 109.5
C24 C23 H23A 107.8 109.5
C23 C24 H24 108.9 109.5
C23 C24 H24A 108.9 109.5
H23 C23 H23A 111.1 109.5
C25 C24 H24 108.8 109.5
C25 C24 H24A 108.8 109.5
H24 C24 H24A 110.1 109.4
C26 C25 H25 109.9 109.5
C26 C25 H25A 109.9 109.5
C25 C26 H26 109.9 109.5
C25 C26 H26A 110.0 109.5
H25 C25 H25A 109.0 109.5
O27 C26 H26 110.0 109.5
O27 C26 H26A 110.0 109.5
H26 C26 H26A 109.0 109.5
H28 C28 H28A 109.5 109.5
H28 C28 H28B 109.5 109.5
H28A C28 H28B 109.5 109.5
C30 C29 C33 100.9 104.2
C30 C29 H29 112.4 110.5
C30 C29 H29A 112.4 110.6
C33 C29 H29 112.4 110.5
C33 C29 H29A 112.4 110.5
C29 C33 C32 106.3 102.7
C29 C33 H33 110.0 110.8
H29 C29 H29A 106.4 110.5
O34 C30 H30 112.6 110.1
C31 C30 H30 107.3 110.0
C30 C31 C32 104.9 106.6
C30 C31 H31 110.0 110.1
N35 C31 H31 102.3 110.0
C32 C31 H31 112.8 110.0
C31 C32 C33 97.7 104.2
C31 C32 H32 113.6 110.5
C31 C32 H32A 113.6 110.5
C33 C32 H32 113.6 110.5
C33 C32 H32A 113.6 110.4
C32 C33 H33 110.5 110.8
H32 C32 H32A 105.0 110.6
HN35 N35 HN3A 109.5 111.0

Torsion Angles for RX0

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C1 C2 C19 174.5 180.3
C2 C1 C19 C17 291.8 113.1
C2 C1 C19 C21 109.8 293.0
C2 C1 C3 C19 185.4 179.7
C3 C1 C19 C17 117.4 292.8
C3 C1 C19 C21 295.4 112.7
C1 C19 C21 C22 180.4 180.0
C1 C19 C21 H21 0.4 0.1
C4 C2 C1 C19 183.5 180.0
H2 C2 C1 C19 3.6 359.9
C5 C3 C1 C19 176.9 180.0
H3 C3 C1 C19 356.9 0.1
C6 C4 C2 H2 180.4 180.0
H4 C4 C2 H2 0.4 0.0
C6 C5 C3 H3 178.7 180.0
C5 C6 C4 H4 180.7 179.7
H5 C5 C3 H3 358.7 360.0
H6 C6 C4 H4 0.7 0.0
H6 C6 C5 H5 359.7 0.0
O8 C7 N9 C13 202.1 4.7
O8 C7 N9 C14 343.3 184.3
C13 N9 C7 C14 218.9 180.3
C7 N9 C13 C12 91.6 126.4
C7 N9 C13 H13 211.6 246.1
C7 N9 C13 H13A 331.6 6.5
C7 N9 C14 C10 267.2 233.6
C7 N9 C14 H14 27.3 353.4
C7 N9 C14 H14A 147.2 113.9
C7 N9 C13 C14 142.0 179.7
C13 N9 C14 C10 49.0 53.3
C13 N9 C14 H14 169.0 173.1
C13 N9 C14 H14A 289.0 293.5
N9 C13 C12 C15 179.9 174.6
N9 C13 C12 H12 295.4 294.6
H13 C13 N9 H13A 240.0 239.6
C7 N9 C14 C13 218.2 180.3
C14 N9 C13 C12 309.6 306.7
C14 N9 C13 H13 69.6 66.5
C14 N9 C13 H13A 189.6 186.9
N9 C14 C10 H10 63.5 185.5
N9 C14 C10 H10A 183.5 65.4
H14 C14 N9 H14A 240.0 239.6
N9 C14 C10 H14 120.0 119.8
N9 C14 C10 H14A 240.0 240.2
C11 C10 C14 H10 240.0 119.9
C11 C10 C14 H10A 120.0 240.0
C14 C10 C11 H11 184.7 181.6
C14 C10 C11 H11A 304.7 301.5
H10 C10 C14 H10A 240.0 120.1
N9 C14 C10 C11 303.5 305.4
C14 C10 C11 H10 120.0 240.2
C14 C10 C11 H10A 240.0 120.1
H10 C10 C11 H10A 120.0 239.9
C12 C11 C10 H11 240.0 240.0
C12 C11 C10 H11A 120.0 120.0
H11 C11 C10 H11A 240.0 240.1
C14 C10 H10 H10A 119.6 239.8
C11 C10 H10 H10A 240.5 120.1
H10 C10 C11 H11 64.7 301.4
H10 C10 C11 H11A 184.7 61.3
C14 C10 H10A H10 240.4 119.9
C11 C10 H10A H10 119.6 239.9
H10A C10 C11 H11 304.7 61.5
H10A C10 C11 H11A 64.7 181.4
N9 C13 C12 C11 55.4 54.7
C12 C11 C10 H10 304.7 181.3
C12 C11 C10 H10A 184.7 301.4
C10 C11 C12 H11 120.0 120.0
C10 C11 C12 H11A 240.0 240.0
H11 C11 C12 H11A 120.0 120.0
H11 C11 C10 H10 64.7 301.4
H11 C11 C10 H10A 304.7 61.5
C10 C11 H11 H11A 120.6 120.0
C12 C11 H11 H11A 239.4 240.0
H11A C11 C10 H10 184.7 61.3
H11A C11 C10 H10A 64.7 181.4
C10 C11 H11A H11 239.4 240.0
C12 C11 H11A H11 120.6 120.0
C12 C13 N9 C14 309.6 306.7
N9 C13 C12 H13 120.0 119.8
N9 C13 C12 H13A 240.0 240.2
C13 C12 C11 H11 178.1 178.3
C13 C12 C11 H11A 58.2 58.4
C15 C12 C13 H12 244.4 240.0
C13 C12 C15 C17 185.1 301.3
C13 C12 C15 O16 306.9 61.3
C15 C12 C11 H11 52.9 58.7
C15 C12 C11 H11A 292.9 298.7
C13 C12 C15 H12 118.7 120.1
O16 C15 C12 C17 121.8 120.0
C12 C15 C17 C18 117.4 296.6
C12 C15 O16 HO16 180.0 59.9
H12 C12 C11 H11 297.3 298.6
H12 C12 C11 H11A 177.3 178.6
C13 C12 H12 C15 238.5 240.2
H12 C12 C15 C17 66.4 181.1
H12 C12 C15 O16 188.2 301.2
H13 C13 N9 C14 69.6 66.5
N9 C13 H13 C12 236.4 240.7
N9 C13 H13 H13A 118.2 120.3
H13 C13 C12 C15 59.9 54.8
H13 C13 C12 H12 175.5 174.8
H13A C13 N9 C14 189.6 186.9
N9 C13 H13A C12 123.6 119.3
N9 C13 H13A H13 241.8 239.7
H13A C13 C12 C15 299.9 294.4
H13A C13 C12 H12 55.4 54.4
N9 C14 H14 C10 239.8 240.7
N9 C14 H14 H14A 119.9 120.4
H14 C14 C10 H10 303.5 65.7
H14 C14 C10 H10A 63.5 305.6
N9 C14 H14A C10 120.2 119.3
N9 C14 H14A H14 240.1 239.6
H14A C14 C10 H10 183.5 305.3
H14A C14 C10 H10A 303.5 185.2
C23 C15 C12 H12 298.9 61.2
C23 C15 O16 HO16 57.5 300.0
C1 C19 C17 C15 358.7 360.0
C17 C15 C12 H12 66.4 181.1
C12 C15 C17 O16 119.9 120.0
C17 C15 O16 HO16 300.0 180.0
C15 C17 C18 C20 179.3 180.0
C15 C17 C18 H18 359.4 360.0
O16 C15 C12 H12 188.2 301.2
C12 C15 O16 C17 240.0 240.0
O16 C15 C17 C18 357.4 176.5
HO16 O16 C15 C17 300.0 180.0
C1 C19 C17 C21 177.9 179.9
C19 C17 C18 C20 358.5 0.3
C19 C17 C18 H18 178.5 180.3
C1 C19 C17 C18 179.6 179.7
C20 C18 C17 H18 180.0 180.0
C17 C18 C20 H20 181.0 179.9
C17 C18 C20 H18 180.0 180.0
C22 C20 C18 H20 180.0 180.1
C17 C18 H18 C20 180.0 180.0
H18 C18 C20 H20 1.0 359.9
C1 C19 C21 C17 181.8 180.1
C22 C21 C19 H21 180.0 179.9
C19 C21 C22 H22 180.8 180.0
C22 C20 C18 H18 181.0 180.1
C18 C20 C22 H20 180.0 179.9
C19 C21 C22 C20 0.8 0.4
H20 C20 C18 H18 1.0 359.9
C19 C21 C22 H21 180.0 180.1
C21 C22 C20 H20 179.4 179.8
C19 C21 H21 C22 180.0 179.9
H21 C21 C22 H22 0.9 359.9
H22 C22 C20 H20 359.4 0.1
H22 C22 C21 H21 0.9 359.9
H23 C23 C24 H23A 120.0 120.0
C25 C24 C23 H24 240.0 240.0
C25 C24 C23 H24A 120.0 120.0
H24 C24 C23 H24A 240.0 240.0
C24 C23 H23 H23A 242.1 240.0
H23 C23 C24 H24 165.5 180.0
H23 C23 C24 H24A 285.5 300.0
C24 C23 H23A H23 117.8 120.0
H23A C23 C24 H24 45.5 60.0
H23A C23 C24 H24A 165.5 180.0
C25 C24 C23 H23 45.5 60.0
C25 C24 C23 H23A 285.5 300.0
C23 C24 C25 H24 120.0 120.0
C23 C24 C25 H24A 240.0 240.0
H24 C24 C25 H24A 120.0 120.0
H24 C24 C23 H23 165.5 180.0
H24 C24 C23 H23A 45.5 60.0
C23 C24 H24 H24A 119.3 120.0
C25 C24 H24 H24A 240.8 240.0
H24A C24 C23 H23 285.5 300.0
H24A C24 C23 H23A 165.5 180.0
C23 C24 H24A H24 240.7 240.0
C25 C24 H24A H24 119.2 120.0
C26 C25 C24 H24 159.7 60.0
C26 C25 C24 H24A 39.7 300.0
H25 C25 C26 H25A 120.0 120.0
O27 C26 C25 H26 240.0 240.0
O27 C26 C25 H26A 120.0 120.0
H26 C26 C25 H26A 240.0 240.0
H25 C25 C24 H24 279.7 180.0
H25 C25 C24 H24A 159.7 60.0
C26 C25 H25 H25A 239.5 240.0
H25 C25 C26 H26 200.6 180.0
H25 C25 C26 H26A 320.6 300.0
H25A C25 C24 H24 39.7 300.0
H25A C25 C24 H24A 279.7 180.0
C26 C25 H25A H25 120.5 120.0
H25A C25 C26 H26 80.6 60.0
H25A C25 C26 H26A 200.6 180.0
O27 C26 C25 H25 80.6 60.0
O27 C26 C25 H25A 320.6 300.0
C25 C26 O27 H26 120.0 120.0
C25 C26 O27 H26A 240.0 240.0
H26 C26 O27 H26A 120.0 120.0
H26 C26 C25 H25 200.6 180.0
H26 C26 C25 H25A 80.6 60.0
C25 C26 H26 H26A 120.6 120.0
O27 C26 H26 H26A 239.4 240.0
H26A C26 C25 H25 320.6 300.0
H26A C26 C25 H25A 200.6 180.0
C25 C26 H26A H26 239.4 240.0
O27 C26 H26A H26 120.6 120.0
C28 O27 C26 H26 101.7 60.0
C28 O27 C26 H26A 341.7 300.0
H28A C28 H28 H28B 120.0 120.0
H28 C28 H28A H28B 240.0 240.0
H28 C28 H28B H28A 120.0 120.0
C33 C29 C30 H29 240.0 241.4
C33 C29 C30 H29A 120.0 118.8
C30 C29 C33 C32 323.2 322.0
C30 C29 C33 H33 83.0 80.4
H29 C29 C30 H29A 240.0 237.4
C30 C29 C33 H29 120.0 118.6
C30 C29 C33 H29A 240.0 241.2
H29 C29 C33 H29A 120.0 122.6
C31 C32 C33 C29 47.6 38.0
C29 C33 C32 H32 287.7 279.3
C29 C33 C32 H32A 167.6 156.6
C32 C33 C29 H33 240.3 241.7
C30 C29 H29 C33 246.9 245.3
C30 C29 H29 H29A 123.4 122.7
C33 C29 H29 H29A 236.5 237.4
H29 C29 C33 C32 203.3 203.4
H29 C29 C33 H33 323.0 321.8
C30 C29 H29A C33 113.1 114.8
C30 C29 H29A H29 236.6 237.4
C33 C29 H29A H29 123.5 122.6
H29A C29 C33 C32 83.2 80.9
H29A C29 C33 H33 203.0 199.2
O34 C30 C29 H29 248.1 261.5
O34 C30 C29 H29A 8.1 24.1
C31 C30 O34 H30 239.6 238.6
O34 C30 C31 H31 145.3 121.4
C31 C30 C29 C33 10.9 23.6
C31 C30 C29 H29 130.9 142.2
C31 C30 C29 H29A 250.9 264.9
O34 C30 C31 H30 123.5 121.5
N35 C31 C30 H31 245.3 238.6
C32 C31 C30 H31 121.6 119.3
C30 C31 C32 C33 321.4 336.4
C30 C31 C32 H32 81.4 95.0
C30 C31 C32 H32A 201.4 217.8
H30 C30 C29 C33 250.8 264.4
H30 C30 C29 H29 10.8 23.0
H30 C30 C29 H29A 130.8 145.6
H30 C30 C31 C32 143.4 119.3
H30 C30 C31 H31 21.8 360.0
N35 C31 C30 H30 267.1 238.5
C30 C31 N35 H31 119.1 121.5
C32 C31 N35 H31 238.8 238.6
N35 C31 C32 H32 316.0 335.7
N35 C31 C32 H32A 75.9 98.5
C29 C33 C32 C31 47.6 38.0
C32 C31 C30 H30 143.4 119.3
C30 C31 C32 H31 240.3 240.7
N35 C31 C32 H31 114.9 121.4
C33 C32 C31 H32 240.0 241.3
C33 C32 C31 H32A 120.0 118.6
C31 C32 C33 H33 288.3 279.6
H32 C32 C31 H32A 240.0 237.3
H31 C31 C30 H30 21.8 360.0
C30 C31 H31 C32 116.7 117.2
H31 C31 C32 C33 81.1 95.7
H31 C31 C32 H32 201.1 214.4
H31 C31 C32 H32A 321.0 337.1
C32 C33 C29 H29 203.3 203.4
C32 C33 C29 H29A 83.2 80.9
C29 C33 C32 H33 119.4 118.4
C33 C32 C31 H31 81.1 95.7
C31 C32 C33 H32 120.0 118.7
C31 C32 C33 H32A 240.0 241.3
H32 C32 C33 H32A 120.0 122.6
H32 C32 C31 H31 201.1 214.4
C31 C32 H32 C33 249.5 245.2
C31 C32 H32 H32A 124.7 122.7
C33 C32 H32 H32A 235.2 237.4
H32 C32 C33 H33 168.3 160.9
H32A C32 C31 H31 321.0 337.1
C31 C32 H32A C33 110.5 114.7
C31 C32 H32A H32 235.3 237.3
C33 C32 H32A H32 124.8 122.6
H32A C32 C33 H33 48.2 38.3
H33 C33 C29 H29 323.0 321.8
H33 C33 C29 H29A 203.0 199.2
C29 C33 H33 C32 242.9 246.6
H33 C33 C32 H32 168.3 160.9
H33 C33 C32 H32A 48.2 38.3
HO34 O34 C30 H30 55.4 300.1
HN35 N35 C31 H31 60.9 300.0
HN3A N35 C31 H31 180.9 64.0