PDB Chemical Component RVX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RVX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N	CA	1.475	1.469
CA	C	1.565	1.507
CA	CB	1.559	1.529
C	O	1.213	1.208
C	OXT	1.332	1.342
CB	OG	1.403	1.429
OG	P1	1.643	1.610
P1	O1	1.483	1.481
P1	C1	1.735	1.823
P1	O2	1.648	1.610
O2	C2	1.430	1.429
C2	C3	1.567	1.531
C3	C5	1.532	1.529
C3	C4	1.534	1.530
N	HN1	1.000	1.010
N	HN2	1.000	1.009
CA	HA	1.100	1.090
CB	HB1C	1.100	1.090
CB	HB2C	1.100	1.090
OXT	HXT	0.950	0.967
C1	H11C	1.100	1.090
C1	H12C	1.100	1.090
C1	H13C	1.100	1.089
C2	H21C	1.100	1.090
C2	H22C	1.100	1.090
C3	H3	1.100	1.090
C5	H51C	1.100	1.090
C5	H52C	1.100	1.091
C5	H53C	1.100	1.090
C4	H41C	1.100	1.090
C4	H42C	1.100	1.089
C4	H43C	1.100	1.091

Bond Angles for RVX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	CA	C	111.8	109.5
N	CA	CB	108.4	109.5
CA	N	HN1	109.5	111.0
CA	N	HN2	109.5	111.0
N	CA	HA	108.6	109.5
C	CA	CB	112.9	109.5
CA	C	O	120.1	120.0
CA	C	OXT	117.9	120.0
C	CA	HA	107.5	109.4
CA	CB	OG	114.1	109.5
CB	CA	HA	107.5	109.5
CA	CB	HB1C	108.3	109.5
CA	CB	HB2C	108.3	109.5
O	C	OXT	122.1	120.0
C	OXT	HXT	109.5	117.0
CB	OG	P1	123.8	123.0
OG	CB	HB1C	108.3	109.4
OG	CB	HB2C	108.3	109.4
OG	P1	O1	107.7	109.4
OG	P1	C1	106.9	109.5
OG	P1	O2	111.2	109.5
O1	P1	C1	115.2	109.5
O1	P1	O2	108.7	109.5
C1	P1	O2	107.2	109.5
P1	C1	H11C	109.5	109.5
P1	C1	H12C	109.5	109.4
P1	C1	H13C	109.4	109.5
P1	O2	C2	125.9	123.0
O2	C2	C3	116.5	109.5
O2	C2	H21C	107.7	109.5
O2	C2	H22C	107.7	109.5
C2	C3	C5	110.7	109.4
C2	C3	C4	109.7	109.5
C3	C2	H21C	107.7	109.5
C3	C2	H22C	107.7	109.4
C2	C3	H3	109.5	109.5
C5	C3	C4	106.9	109.5
C5	C3	H3	110.0	109.5
C3	C5	H51C	109.5	109.5
C3	C5	H52C	109.5	109.5
C3	C5	H53C	109.5	109.5
C4	C3	H3	110.0	109.5
C3	C4	H41C	109.5	109.5
C3	C4	H42C	109.5	109.5
C3	C4	H43C	109.5	109.5
HN1	N	HN2	109.4	111.0
HB1C	CB	HB2C	109.5	109.5
H11C	C1	H12C	109.4	109.5
H11C	C1	H13C	109.5	109.5
H12C	C1	H13C	109.5	109.5
H21C	C2	H22C	109.5	109.4
H51C	C5	H52C	109.5	109.4
H51C	C5	H53C	109.5	109.5
H52C	C5	H53C	109.5	109.5
H41C	C4	H42C	109.5	109.5
H41C	C4	H43C	109.5	109.4
H42C	C4	H43C	109.4	109.5

Torsion Angles for RVX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C	CA	N	CB	125.0	120.0
N	CA	C	O	61.7	340.0
N	CA	C	OXT	242.2	160.0
C	CA	N	HA	241.6	240.0
N	CA	CB	OG	197.0	295.0
CB	CA	N	HA	116.6	120.0
N	CA	CB	HB1C	317.6	55.0
N	CA	CB	HB2C	76.3	175.0
HN1	N	CA	HN2	240.0	236.1
N	CA	C	CB	237.5	240.0
C	CA	N	HN1	180.0	296.0
C	CA	N	HN2	300.0	60.0
N	CA	C	HA	119.1	120.0
C	CA	CB	OG	72.6	175.0
CB	CA	C	HA	241.6	240.0
C	CA	CB	HB1C	193.3	295.0
C	CA	CB	HB2C	311.9	55.0
O	C	CA	OXT	179.5	180.1
CA	C	OXT	HXT	179.5	180.0
N	CA	CB	C	124.4	120.0
CB	CA	N	HN1	55.0	176.0
CB	CA	N	HN2	175.0	300.0
N	CA	CB	HA	242.8	240.0
CB	CA	C	O	184.2	100.0
CB	CA	C	OXT	4.7	280.0
C	CA	CB	HA	118.4	120.0
CA	CB	OG	P1	217.5	180.0
OG	CB	CA	HB1C	239.3	240.0
OG	CB	CA	HB2C	120.7	120.0
HB1C	CB	CA	HB2C	241.4	239.9
O	C	CA	CB	184.2	100.0
CA	C	O	OXT	180.5	179.9
O	C	CA	HA	302.6	220.0
O	C	OXT	HXT	0.0	359.9
OXT	C	CA	CB	4.7	280.0
CA	C	OXT	O	179.5	180.1
OXT	C	CA	HA	123.1	40.0
OG	CB	CA	HA	314.2	55.0
CA	CB	OG	HB1C	120.7	120.0
CA	CB	OG	HB2C	239.3	240.0
CB	OG	P1	O1	53.4	55.0
CB	OG	P1	C1	177.7	175.0
CB	OG	P1	O2	294.5	295.1
HB1C	CB	OG	HB2C	118.6	120.0
P1	OG	CB	HB1C	96.8	60.0
P1	OG	CB	HB2C	338.2	300.0
O1	P1	OG	C1	235.7	240.0
O1	P1	OG	O2	118.9	120.0
C1	P1	OG	O2	243.3	239.9
OG	P1	C1	H11C	180.0	60.0
OG	P1	C1	H12C	300.0	180.0
OG	P1	C1	H13C	60.0	300.1
OG	P1	O2	C2	53.7	64.9
OG	P1	O1	C1	119.2	120.0
OG	P1	O1	O2	239.4	240.0
C1	P1	O1	O2	120.3	120.1
O1	P1	C1	H11C	299.6	180.0
O1	P1	C1	H12C	59.6	300.0
O1	P1	C1	H13C	179.6	60.0
O1	P1	O2	C2	295.4	305.0
OG	P1	C1	O1	240.4	240.1
OG	P1	C1	O2	119.4	120.0
O1	P1	C1	O2	238.9	240.0
C1	P1	O2	C2	170.3	185.0
H11C	C1	P1	H12C	240.0	240.0
H11C	C1	P1	H13C	120.0	120.0
H12C	C1	P1	H13C	240.0	240.0
OG	P1	O2	O1	118.3	120.0
OG	P1	O2	C1	243.5	240.0
O1	P1	O2	C1	125.1	120.0
O2	P1	C1	H11C	60.7	300.0
O2	P1	C1	H12C	180.6	60.0
O2	P1	C1	H13C	300.6	180.0
P1	O2	C2	C3	145.6	180.0
P1	O2	C2	H21C	266.6	300.1
P1	O2	C2	H22C	24.6	60.0
O2	C2	C3	C5	231.1	65.0
O2	C2	C3	C4	113.3	185.0
C3	C2	O2	H21C	239.0	239.9
C3	C2	O2	H22C	121.0	120.0
O2	C2	C3	H3	352.5	305.0
H21C	C2	O2	H22C	242.0	240.0
O2	C2	C3	H21C	121.0	120.1
O2	C2	C3	H22C	239.0	240.0
C5	C3	C2	C4	117.8	240.0
C5	C3	C2	H3	238.6	120.0
C2	C3	C5	H51C	180.0	60.0
C2	C3	C5	H52C	300.0	180.0
C2	C3	C5	H53C	60.0	300.0
C4	C3	C2	H3	120.8	240.0
C2	C3	C4	H41C	180.0	60.0
C2	C3	C4	H42C	300.0	180.0
C2	C3	C4	H43C	60.0	300.0
H21C	C2	C3	H22C	118.0	120.0
C2	C3	C5	C4	240.5	120.0
C5	C3	C2	H21C	110.1	305.0
C5	C3	C2	H22C	352.1	185.0
C2	C3	C5	H3	121.2	240.0
C4	C3	C5	H3	240.6	120.1
C5	C3	C4	H41C	59.8	179.9
C5	C3	C4	H42C	179.9	300.0
C5	C3	C4	H43C	299.8	60.0
H51C	C5	C3	H52C	240.0	240.1
H51C	C5	C3	H53C	120.0	120.0
H52C	C5	C3	H53C	240.0	240.0
C2	C3	C4	C5	120.1	240.1
C4	C3	C2	H21C	352.3	65.0
C4	C3	C2	H22C	234.3	305.0
C2	C3	C4	H3	239.5	120.0
C5	C3	C4	H3	119.4	239.9
C4	C3	C5	H51C	299.5	300.1
C4	C3	C5	H52C	59.5	60.0
C4	C3	C5	H53C	179.5	180.0
H41C	C4	C3	H42C	240.0	240.0
H41C	C4	C3	H43C	120.0	120.0
H42C	C4	C3	H43C	240.0	240.0
HN1	N	CA	C	180.0	296.0
HN1	N	CA	CB	55.0	176.0
CA	N	HN1	HN2	120.0	123.9
HN1	N	CA	HA	298.5	56.0
HN2	N	CA	C	300.0	60.0
HN2	N	CA	CB	175.0	300.0
CA	N	HN2	HN1	240.0	236.1
HN2	N	CA	HA	58.4	179.9
N	CA	HA	C	238.9	240.0
N	CA	HA	CB	117.1	120.0
HA	CA	N	HN1	298.5	56.0
HA	CA	N	HN2	58.4	179.9
C	CA	HA	CB	238.2	240.0
HA	CA	C	O	302.6	220.0
HA	CA	C	OXT	123.1	40.0
HA	CA	CB	OG	314.2	55.0
HA	CA	CB	HB1C	74.8	175.0
HA	CA	CB	HB2C	193.5	295.1
CA	CB	HB1C	OG	235.8	240.0
HB1C	CB	CA	HA	74.8	175.0
CA	CB	HB1C	HB2C	117.9	120.1
HB1C	CB	OG	P1	96.8	60.0
OG	CB	HB1C	HB2C	242.1	240.1
CA	CB	HB2C	OG	124.2	120.0
HB2C	CB	CA	HA	193.5	295.1
CA	CB	HB2C	HB1C	242.1	239.9
HB2C	CB	OG	P1	338.2	300.0
OG	CB	HB2C	HB1C	117.9	119.9
H11C	C1	P1	O2	60.7	300.0
P1	C1	H11C	H12C	120.0	119.9
P1	C1	H11C	H13C	240.0	240.0
H12C	C1	H11C	H13C	120.0	120.1
H12C	C1	P1	O2	180.6	60.0
P1	C1	H12C	H11C	240.0	240.0
P1	C1	H12C	H13C	120.0	120.0
H11C	C1	H12C	H13C	240.0	240.0
H13C	C1	P1	O2	300.6	180.0
P1	C1	H13C	H11C	120.0	120.0
P1	C1	H13C	H12C	240.0	240.0
H11C	C1	H13C	H12C	120.0	120.0
O2	C2	H21C	C3	233.6	239.9
O2	C2	H21C	H22C	116.8	120.0
H21C	C2	C3	C5	110.1	305.0
H21C	C2	C3	C4	352.3	65.0
C3	C2	H21C	H22C	243.2	240.0
H21C	C2	C3	H3	231.5	185.0
O2	C2	H22C	C3	126.4	120.0
O2	C2	H22C	H21C	243.2	240.0
H22C	C2	C3	C5	352.1	185.0
H22C	C2	C3	C4	234.3	305.0
C3	C2	H22C	H21C	116.8	120.0
H22C	C2	C3	H3	113.5	65.0
C2	C3	H3	C5	238.1	119.9
C2	C3	H3	C4	120.7	240.0
H3	C3	C2	H21C	231.5	185.0
H3	C3	C2	H22C	113.5	65.0
C5	C3	H3	C4	242.5	120.1
H3	C3	C5	H51C	58.8	180.0
H3	C3	C5	H52C	178.9	299.9
H3	C3	C5	H53C	298.8	60.0
H3	C3	C4	H41C	300.5	300.0
H3	C3	C4	H42C	60.5	60.0
H3	C3	C4	H43C	180.5	180.0
H51C	C5	C3	C4	299.5	300.1
H51C	C5	C3	H3	58.8	180.0
C3	C5	H51C	H52C	120.0	120.0
C3	C5	H51C	H53C	240.0	239.9
H52C	C5	H51C	H53C	120.0	120.0
H52C	C5	C3	C4	59.5	60.0
H52C	C5	C3	H3	178.9	299.9
C3	C5	H52C	H51C	240.0	240.0
C3	C5	H52C	H53C	120.0	120.0
H51C	C5	H52C	H53C	240.0	240.0
H53C	C5	C3	C4	179.5	180.0
H53C	C5	C3	H3	298.8	60.0
C3	C5	H53C	H51C	120.0	120.1
C3	C5	H53C	H52C	240.0	240.0
H51C	C5	H53C	H52C	120.0	119.9
H41C	C4	C3	H3	300.5	300.0
C3	C4	H41C	H42C	120.0	120.0
C3	C4	H41C	H43C	240.0	240.0
H42C	C4	H41C	H43C	120.0	120.0
H42C	C4	C3	H3	60.5	60.0
C3	C4	H42C	H41C	240.0	240.0
C3	C4	H42C	H43C	120.0	120.0
H41C	C4	H42C	H43C	240.0	240.1
H43C	C4	C3	H3	180.5	180.0
C3	C4	H43C	H41C	120.0	120.0
C3	C4	H43C	H42C	240.0	240.0
H41C	C4	H43C	H42C	120.0	120.0