PDB Chemical Component RU9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RU9

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N1	1.452	1.348
C1	C2	1.527	1.475
C1	OAB	1.187	1.216
O1	C12	1.402	1.357
O1	C15	1.402	1.359
C2	C3	1.318	1.395
C2	C8	1.522	1.402
C3	C4	1.529	1.383
N3	C4	1.402	1.382
N3	C5	1.429	1.368
C4	C6	1.311	1.409
N4	C5	1.285	1.313
N4	C6	1.496	1.348
C5	C9	1.527	1.478
C6	C7	1.529	1.401
C7	C8	1.313	1.362
C9	C10	1.525	1.397
C9	C14	1.319	1.396
C10	C11	1.313	1.378
C11	C12	1.527	1.390
C12	C13	1.319	1.390
C13	C14	1.530	1.378
C15	C16	1.528	1.388
C15	C20	1.317	1.386
C16	C17	1.316	1.381
C17	C18	1.527	1.382
C18	C19	1.316	1.388
C19	C20	1.527	1.386
C19	OAC	1.399	1.359
N1	H11N	1.000	0.971
N1	H12N	1.000	0.970
C3	H3	1.080	1.080
C8	H8	1.080	1.080
N3	HA	1.000	0.971
C7	H7	1.080	1.081
C10	H10	1.080	1.079
C14	H14	1.080	1.080
C11	H11	1.080	1.080
C13	H13	1.081	1.080
C16	H16	1.080	1.080
C20	H20	1.080	1.080
C17	H17	1.080	1.080
C18	H18	1.080	1.080
OAC	HAC	0.950	0.967

Bond Angles for RU9

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	C2	119.9	120.0
N1	C1	OAB	120.0	120.0
C1	N1	H11N	120.0	120.0
C1	N1	H12N	120.0	120.1
C2	C1	OAB	119.7	120.0
C1	C2	C3	120.6	120.0
C1	C2	C8	119.1	119.9
C12	O1	C15	109.9	118.0
O1	C12	C11	119.2	120.0
O1	C12	C13	120.9	119.9
O1	C15	C16	120.1	120.0
O1	C15	C20	120.1	120.1
C3	C2	C8	120.2	120.1
C2	C3	C4	120.1	119.6
C2	C3	H3	120.0	120.2
C2	C8	C7	119.7	120.5
C2	C8	H8	120.1	119.8
C3	C4	N3	133.0	133.8
C3	C4	C6	119.5	120.0
C4	C3	H3	119.9	120.2
C4	N3	C5	108.6	107.1
N3	C4	C6	107.5	106.2
C4	N3	HA	125.7	126.5
N3	C5	N4	107.8	109.8
N3	C5	C9	127.6	125.1
C5	N3	HA	125.7	126.4
C4	C6	N4	107.9	107.2
C4	C6	C7	120.3	119.7
C5	N4	C6	108.2	109.8
N4	C5	C9	124.6	125.1
N4	C6	C7	131.8	133.1
C5	C9	C10	118.3	120.0
C5	C9	C14	121.6	120.1
C6	C7	C8	120.1	120.1
C6	C7	H7	120.0	119.9
C7	C8	H8	120.1	119.7
C8	C7	H7	119.9	120.0
C10	C9	C14	120.1	119.9
C9	C10	C11	120.0	119.9
C9	C10	H10	120.0	120.1
C9	C14	C13	119.8	119.9
C9	C14	H14	120.1	120.1
C10	C11	C12	120.2	120.1
C11	C10	H10	120.0	120.0
C10	C11	H11	119.9	120.0
C11	C12	C13	119.8	120.1
C12	C11	H11	119.9	119.9
C12	C13	C14	120.0	120.1
C12	C13	H13	120.0	119.9
C13	C14	H14	120.1	120.0
C14	C13	H13	120.0	120.0
C16	C15	C20	119.8	119.9
C15	C16	C17	120.2	120.1
C15	C16	H16	119.9	120.0
C15	C20	C19	120.0	119.9
C15	C20	H20	120.0	120.0
C16	C17	C18	119.9	120.1
C17	C16	H16	119.9	119.9
C16	C17	H17	120.0	120.0
C17	C18	C19	119.9	120.1
C18	C17	H17	120.1	119.9
C17	C18	H18	120.0	120.0
C18	C19	C20	120.2	119.9
C18	C19	OAC	119.8	120.0
C19	C18	H18	120.0	119.9
C20	C19	OAC	120.0	120.0
C19	C20	H20	120.0	120.1
C19	OAC	HAC	109.5	114.0
H11N	N1	H12N	120.0	119.9

Torsion Angles for RU9

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	N1	OAB	187.4	180.2
N1	C1	C2	C3	335.6	180.0
N1	C1	C2	C8	154.5	359.8
H11N	N1	C1	H12N	180.0	180.1
N1	C1	C2	OAB	172.6	179.8
C2	C1	N1	H11N	187.4	0.0
C2	C1	N1	H12N	7.4	179.9
C3	C2	C1	C8	181.0	180.2
C1	C2	C3	C4	179.0	180.0
C1	C2	C3	H3	359.0	0.0
C1	C2	C8	C7	181.0	179.7
C1	C2	C8	H8	1.0	359.9
N1	C1	OAB	C2	187.4	180.2
OAB	C1	N1	H11N	360.0	179.8
OAB	C1	N1	H12N	180.0	359.7
OAB	C1	C2	C3	163.0	0.2
OAB	C1	C2	C8	341.9	180.0
C12	O1	C15	C16	272.8	6.2
C12	O1	C15	C20	92.8	185.8
C10	C11	C12	O1	180.5	180.0
C11	C12	O1	C13	179.4	180.0
O1	C12	C11	H11	0.5	0.0
O1	C12	C13	C14	179.5	179.8
O1	C12	C13	H13	359.5	359.9
C15	O1	C12	C11	309.9	67.4
C15	O1	C12	C13	130.4	247.4
C16	C15	O1	C20	180.1	180.3
O1	C15	C16	C17	179.8	180.0
O1	C15	C16	H16	359.8	360.0
O1	C15	C20	C19	180.2	179.7
O1	C15	C20	H20	0.2	0.1
C3	C2	C1	OAB	163.0	0.2
C1	C2	C3	C8	178.9	179.8
C3	C2	C8	C7	360.0	359.5
C3	C2	C8	H8	180.0	179.7
C2	C3	C4	N3	179.9	180.0
C2	C3	C4	C6	0.0	0.0
C4	C3	C2	H3	180.0	180.0
C8	C2	C1	OAB	341.9	180.0
C1	C2	C8	C3	181.0	180.2
C8	C2	C3	C4	0.0	0.2
C8	C2	C3	H3	180.0	180.3
C6	C7	C8	C2	360.0	0.5
C7	C8	C2	H8	180.0	179.8
C2	C8	C7	H7	180.0	180.2
C4	C3	C2	C8	0.0	0.2
C2	C3	C4	H3	180.0	180.0
C3	C4	N3	C5	179.7	180.0
N3	C4	C3	C6	179.9	180.0
C3	C4	N3	HA	359.7	0.0
C3	C4	C6	N4	180.0	180.0
C3	C4	C6	C7	360.0	360.0
C3	C4	N3	C6	180.1	180.0
N3	C4	C3	H3	359.9	360.0
C4	N3	C5	N4	0.6	0.1
C4	N3	C5	C9	179.6	180.0
C5	N3	C4	HA	180.0	180.0
N3	C4	C6	N4	0.1	360.0
N3	C4	C6	C7	180.0	180.0
C5	N3	C4	C6	359.6	360.0
C4	N3	C5	HA	180.0	180.0
N3	C5	N4	C6	359.5	359.9
N4	C5	N3	C9	181.0	180.1
N3	C5	C9	C10	202.8	180.0
N3	C5	C9	C14	23.6	359.8
C3	C4	C6	N3	179.9	180.0
C6	C4	C3	H3	180.0	180.0
C6	C4	N3	C5	359.6	360.0
C6	C4	N3	HA	179.6	180.0
C5	N4	C6	C4	0.3	0.1
N4	C6	C4	C7	180.1	180.0
C4	C6	C7	C8	0.1	359.7
C4	C6	C7	H7	180.0	180.0
N3	C5	N4	C9	179.0	179.9
N4	C5	N3	HA	180.6	180.0
C4	C6	N4	C5	0.3	0.1
C5	N4	C6	C7	180.4	180.0
N4	C5	C9	C10	21.5	359.9
N4	C5	C9	C14	202.4	179.7
C4	C6	N4	C7	179.9	180.0
C6	N4	C5	C9	180.5	180.0
N4	C6	C7	C8	179.9	179.8
N4	C6	C7	H7	359.9	0.1
N3	C5	C9	N4	181.2	180.1
C9	C5	N3	HA	359.5	359.9
C9	C5	N4	C6	180.5	180.0
C10	C9	C5	C14	179.1	180.3
C5	C9	C10	C11	180.5	180.0
C5	C9	C10	H10	0.5	360.0
C5	C9	C14	C13	179.5	179.8
C5	C9	C14	H14	359.5	360.0
C2	C8	C7	C6	360.0	0.5
C4	C6	C7	N4	180.1	179.9
C6	C7	C8	H8	180.0	180.3
C8	C7	C6	H7	180.0	179.7
C2	C8	C7	H8	180.0	180.2
C6	C7	C8	H7	180.0	180.3
C5	C9	C10	C14	180.9	179.7
C10	C9	C14	C13	0.4	359.5
C10	C9	C14	H14	180.4	179.7
C9	C10	C11	C12	0.2	360.0
C11	C10	C9	H10	180.0	180.0
C9	C10	C11	H11	180.2	180.0
C5	C9	C14	C10	179.1	180.3
C14	C9	C10	C11	359.6	0.3
C14	C9	C10	H10	179.6	180.2
C12	C13	C14	C9	359.7	0.5
C13	C14	C9	H14	180.0	179.8
C9	C14	C13	H13	179.7	180.3
O1	C12	C11	C10	180.5	180.0
C11	C10	C9	C14	359.6	0.3
C9	C10	C11	H10	180.0	180.0
C10	C11	C12	C13	359.9	360.0
C12	C11	C10	H11	180.0	180.0
C11	C12	O1	C15	309.9	67.4
O1	C12	C11	C13	180.6	180.0
C12	C11	C10	H10	180.2	180.0
C10	C11	C12	H11	180.0	180.0
C11	C12	C13	C14	0.1	359.8
C11	C12	C13	H13	180.1	179.9
C13	C12	O1	C15	130.4	247.4
O1	C12	C13	C11	179.4	180.0
C9	C14	C13	C12	359.7	0.5
C13	C12	C11	H11	179.9	180.0
C12	C13	C14	H14	179.7	180.3
C14	C13	C12	H13	180.0	179.9
C9	C14	C13	H14	180.0	180.2
C12	C13	C14	H13	180.0	180.1
O1	C15	C16	C20	179.9	179.7
C16	C15	C20	C19	0.2	359.3
C16	C15	C20	H20	180.2	179.7
C15	C16	C17	C18	0.0	360.0
C17	C16	C15	H16	180.0	180.1
C15	C16	C17	H17	180.0	180.0
O1	C15	C20	C16	180.1	180.3
C20	C15	C16	C17	359.9	0.3
C20	C15	C16	H16	179.9	180.3
C18	C19	C20	C15	359.8	0.7
C15	C20	C19	OAC	179.5	180.4
C19	C20	C15	H20	180.0	179.6
C17	C16	C15	C20	359.9	0.3
C15	C16	C17	H16	180.0	179.9
C16	C17	C18	C19	360.0	360.0
C18	C17	C16	H17	180.0	180.0
C16	C17	C18	H18	180.0	179.9
C18	C17	C16	H16	180.0	180.0
C16	C17	C18	H17	180.0	180.0
C17	C18	C19	C20	0.1	359.7
C17	C18	C19	OAC	180.4	180.0
C19	C18	C17	H18	180.0	180.1
C15	C20	C19	C18	359.8	0.7
C19	C18	C17	H17	180.0	180.0
C17	C18	C19	H18	180.0	179.9
C20	C19	C18	OAC	179.7	179.7
C18	C19	C20	H20	179.8	180.3
C18	C19	OAC	HAC	180.0	90.0
C15	C20	C19	H20	180.0	180.4
C18	C19	C20	OAC	180.3	180.3
C20	C19	C18	H18	180.1	179.7
C20	C19	OAC	HAC	0.3	270.3
C18	C19	OAC	C20	179.7	179.7
OAC	C19	C18	H18	0.4	0.0
OAC	C19	C20	H20	359.5	360.0
H11N	N1	C1	C2	187.4	0.0
H11N	N1	C1	OAB	360.0	179.8
C1	N1	H11N	H12N	180.0	179.9
H12N	N1	C1	C2	7.4	179.9
H12N	N1	C1	OAB	180.0	359.7
C1	N1	H12N	H11N	180.0	180.1
H3	C3	C2	C8	180.0	180.3
C2	C3	H3	C4	180.0	180.0
H3	C3	C4	N3	359.9	360.0
H3	C3	C4	C6	180.0	180.0
C2	C8	H8	C7	180.0	179.8
H8	C8	C7	H7	360.0	0.0
C4	N3	HA	C5	180.0	179.9
HA	N3	C4	C6	179.6	180.0
HA	N3	C5	N4	180.6	180.0
HA	N3	C5	C9	359.5	359.9
C6	C7	H7	C8	180.0	179.7
H7	C7	C8	H8	360.0	0.0
H10	C10	C9	C14	179.6	180.2
C9	C10	H10	C11	180.0	180.0
H10	C10	C11	C12	180.2	180.0
H10	C10	C11	H11	0.2	0.0
C9	C14	H14	C13	180.0	179.8
H14	C14	C13	H13	359.7	0.1
C10	C11	H11	C12	180.0	180.0
H11	C11	C10	H10	0.2	0.0
H11	C11	C12	C13	179.9	180.0
C12	C13	H13	C14	180.0	179.9
H13	C13	C14	H14	359.7	0.1
H16	C16	C15	C20	179.9	180.3
C15	C16	H16	C17	180.0	180.1
H16	C16	C17	C18	180.0	180.0
H16	C16	C17	H17	0.0	0.0
C15	C20	H20	C19	180.0	179.6
H20	C20	C19	OAC	359.5	360.0
C16	C17	H17	C18	180.0	180.0
H17	C17	C16	H16	0.0	0.0
H17	C17	C18	C19	180.0	180.0
H17	C17	C18	H18	360.0	360.0
C17	C18	H18	C19	180.0	180.1
H18	C18	C17	H17	360.0	360.0
H18	C18	C19	C20	180.1	179.7
H18	C18	C19	OAC	0.4	0.0