PDB Chemical Component RTR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RTR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N29	C28	1.344	1.303
N29	H29	1.020	0.971
C28	N30	1.333	1.377
C28	C27	1.474	1.481
N30	H301	1.020	0.970
N30	H302	1.019	0.970
C27	C26	1.414	1.394
C27	C25	1.423	1.394
C26	C24	1.409	1.380
C26	H26	1.104	1.080
C24	C22	1.414	1.382
C24	H24	1.103	1.080
C22	C23	1.416	1.383
C22	C21	1.511	1.506
C23	C25	1.412	1.379
C23	H23	1.103	1.080
C25	H25	1.102	1.080
C21	N19	1.470	1.466
C21	H211	1.115	1.091
C21	H212	1.116	1.090
N19	C16	1.400	1.333
N19	C17	1.495	1.456
C16	O20	1.233	1.214
C16	C12	1.547	1.504
C12	N7	1.466	1.470
C12	H121	1.114	1.091
C12	H122	1.115	1.089
N7	C13	1.652	1.473
N7	S4	1.745	1.655
C13	C17	1.526	1.530
C13	H131	1.114	1.089
C13	H132	1.115	1.089
C17	H171	1.116	1.089
C17	H172	1.115	1.090
S4	O8	1.429	1.421
S4	O9	1.429	1.420
S4	C1	1.718	1.762
C1	C3	1.411	1.340
C1	S2	1.701	1.782
C3	C6	1.457	1.456
C3	H3	1.103	1.080
C6	C5	1.453	1.412
C6	C11	1.393	1.414
C5	S2	1.696	1.774
C5	C10	1.388	1.378
C10	C14	1.411	1.381
C10	H10	1.103	1.080
C14	CL	1.724	1.736
C14	C15	1.415	1.389
C15	C11	1.418	1.360
C15	H15	1.103	1.081
C11	H11	1.103	1.080

Bond Angles for RTR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C28	N29	H29	96.0	120.0
N29	C28	N30	118.9	120.0
N29	C28	C27	119.7	120.0
N30	C28	C27	121.4	120.1
C28	N30	H301	118.9	120.0
C28	N30	H302	108.9	120.0
C28	C27	C26	120.1	120.1
C28	C27	C25	121.1	120.1
H301	N30	H302	108.8	120.0
C26	C27	C25	118.9	119.8
C27	C26	C24	120.3	119.8
C27	C26	H26	120.1	120.1
C27	C25	C23	120.6	119.9
C27	C25	H25	120.1	120.1
C24	C26	H26	119.7	120.1
C26	C24	C22	121.1	120.2
C26	C24	H24	119.2	119.9
C22	C24	H24	119.7	119.9
C24	C22	C23	118.7	120.3
C24	C22	C21	119.6	119.9
C23	C22	C21	121.7	119.9
C22	C23	C25	120.5	120.1
C22	C23	H23	119.9	119.9
C22	C21	N19	113.5	109.5
C22	C21	H211	110.7	109.5
C22	C21	H212	110.7	109.5
C25	C23	H23	119.6	120.0
C23	C25	H25	119.3	120.1
N19	C21	H211	110.7	109.5
N19	C21	H212	110.8	109.5
C21	N19	C16	118.9	117.7
C21	N19	C17	117.6	117.7
H211	C21	H212	99.5	109.4
C16	N19	C17	123.5	124.6
N19	C16	O20	123.9	118.4
N19	C16	C12	115.8	123.1
N19	C17	C13	112.0	110.8
N19	C17	H171	111.3	109.2
N19	C17	H172	111.3	109.2
O20	C16	C12	120.3	118.5
C16	C12	N7	116.3	109.0
C16	C12	H121	109.7	109.7
C16	C12	H122	109.7	109.4
N7	C12	H121	109.8	109.5
N7	C12	H122	109.8	109.6
C12	N7	C13	108.9	117.3
C12	N7	S4	116.0	121.4
H121	C12	H122	100.5	109.7
C13	N7	S4	117.1	121.3
N7	C13	C17	98.3	108.2
N7	C13	H131	116.5	109.7
N7	C13	H132	116.5	109.8
N7	S4	O8	103.4	105.7
N7	S4	O9	106.1	105.8
N7	S4	C1	109.0	107.4
C17	C13	H131	116.5	109.7
C17	C13	H132	116.5	109.7
C13	C17	H171	111.3	109.2
C13	C17	H172	111.3	109.2
H131	C13	H132	93.9	109.8
H171	C17	H172	99.0	109.2
O8	S4	O9	118.8	125.4
O8	S4	C1	109.8	105.7
O9	S4	C1	109.2	105.8
S4	C1	C3	121.0	128.3
S4	C1	S2	126.6	128.2
C3	C1	S2	112.4	103.5
C1	C3	C6	111.7	119.4
C1	C3	H3	122.8	120.3
C1	S2	C5	94.0	98.9
C6	C3	H3	125.5	120.3
C3	C6	C5	110.4	114.6
C3	C6	C11	129.7	128.8
C5	C6	C11	119.9	116.6
C6	C5	S2	111.5	103.6
C6	C5	C10	119.3	122.1
C6	C11	C15	120.8	120.8
C6	C11	H11	118.7	119.6
S2	C5	C10	129.2	134.3
C5	C10	C14	120.2	119.5
C5	C10	H10	119.1	120.3
C14	C10	H10	120.8	120.2
C10	C14	CL	119.5	120.3
C10	C14	C15	121.3	119.5
CL	C14	C15	119.1	120.2
C14	C15	C11	118.5	121.5
C14	C15	H15	120.7	119.2
C11	C15	H15	120.8	119.2
C15	C11	H11	120.5	119.6

Torsion Angles for RTR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N30	C28	N29	C27	180.8	180.0
N29	C28	N30	H301	180.0	0.0
N29	C28	N30	H302	54.8	179.8
N29	C28	C27	C26	163.8	0.0
N29	C28	C27	C25	343.6	179.7
H29	N29	C28	N30	344.8	180.0
H29	N29	C28	C27	164.0	0.0
N30	C28	N29	H29	344.8	180.0
N29	C28	N30	C27	179.2	180.0
N30	C28	C27	C26	343.0	180.0
N30	C28	C27	C25	162.8	359.7
H301	N30	C28	H302	125.2	180.2
C27	C28	N29	H29	164.0	0.0
N29	C28	C27	N30	180.8	180.0
C27	C28	N30	H301	0.8	180.0
C27	C28	N30	H302	235.6	359.8
C26	C27	C28	C25	180.3	180.3
C28	C27	C26	C24	179.6	180.0
C28	C27	C26	H26	359.7	360.0
C28	C27	C25	C23	180.4	179.7
C28	C27	C25	H25	0.3	0.2
H301	N30	C28	C27	0.8	180.0
C28	N30	H301	H302	234.7	179.8
H302	N30	C28	C27	235.6	359.8
C28	N30	H302	H301	130.9	180.2
C28	C27	C26	C25	179.8	179.7
C26	C27	C25	C23	0.1	359.5
C26	C27	C25	H25	180.1	180.0
C24	C26	C27	H26	180.0	180.0
C27	C26	C24	C22	0.1	0.0
C27	C26	C24	H24	180.1	180.0
C28	C27	C25	C26	180.3	180.3
C25	C27	C26	C24	359.9	0.3
C25	C27	C26	H26	179.9	180.3
C22	C23	C25	C27	359.9	0.5
C27	C25	C23	H23	179.9	180.3
C23	C25	C27	H25	180.0	179.5
C24	C26	C27	C25	359.9	0.3
C27	C26	C24	H26	180.0	180.0
C22	C24	C26	H24	180.0	180.0
C26	C24	C22	C23	0.0	360.0
C26	C24	C22	C21	180.7	180.0
H26	C26	C27	C25	179.9	180.3
C27	C26	H26	C24	180.0	180.0
H26	C26	C24	C22	180.0	180.0
H26	C26	C24	H24	0.1	360.0
C22	C24	C26	H26	180.0	180.0
C26	C24	C22	H24	180.0	180.0
C23	C22	C24	C21	179.4	180.0
C24	C22	C23	C25	360.0	359.7
C24	C22	C23	H23	180.0	180.0
C24	C22	C21	N19	228.4	90.0
C24	C22	C21	H211	353.7	210.0
C24	C22	C21	H212	103.1	330.0
H24	C24	C26	H26	0.1	360.0
C26	C24	H24	C22	180.0	180.0
H24	C24	C22	C23	180.0	180.0
H24	C24	C22	C21	0.6	0.0
C27	C25	C23	C22	359.9	0.5
C23	C22	C24	H24	180.0	180.0
C24	C22	C23	C21	180.7	180.0
C23	C22	C21	N19	49.1	270.0
C23	C22	C21	H211	174.4	30.0
C23	C22	C21	H212	283.8	150.0
C25	C23	C22	H23	180.0	179.7
C22	C23	C25	H25	180.0	180.0
C21	C22	C24	H24	0.6	0.0
C24	C22	C21	C23	179.3	180.0
C21	C22	C23	C25	179.3	179.8
C21	C22	C23	H23	359.3	0.0
N19	C21	C22	H211	234.7	240.0
N19	C21	C22	H212	125.3	120.0
C22	C21	N19	C16	252.3	269.7
C22	C21	N19	C17	73.1	90.0
H211	C21	C22	H212	250.6	240.1
C27	C25	C23	H25	180.0	180.5
C25	C23	C22	C21	179.3	179.8
C22	C23	C25	H23	180.0	180.3
H23	C23	C22	C21	359.3	0.0
C22	C23	H23	C25	180.0	179.7
H23	C23	C25	H25	360.0	359.8
C27	C25	H25	C23	180.0	179.5
H25	C25	C23	H23	360.0	359.8
C22	C21	N19	H211	125.3	120.0
C22	C21	N19	H212	234.7	239.9
H211	C21	N19	H212	109.4	119.9
C16	N19	C21	C17	179.2	179.7
C21	N19	C16	O20	0.5	4.5
C21	N19	C16	C12	180.6	184.0
C21	N19	C17	C13	211.3	158.1
C21	N19	C17	H171	336.6	278.4
C21	N19	C17	H172	86.0	37.8
C22	C21	H211	N19	233.2	240.0
C22	C21	H211	H212	116.6	120.0
N19	C21	H211	H212	243.4	240.0
H211	C21	N19	C16	127.1	149.7
H211	C21	N19	C17	307.8	330.0
C22	C21	H212	N19	126.8	120.1
C22	C21	H212	H211	243.4	240.0
N19	C21	H212	H211	116.6	119.9
H212	C21	N19	C16	17.6	29.8
H212	C21	N19	C17	198.4	210.1
C16	N19	C21	H211	127.1	149.7
C16	N19	C21	H212	17.6	29.8
C21	N19	C16	C17	180.8	180.3
C16	N19	C17	C13	32.1	338.4
C16	N19	C17	H171	157.4	98.7
C16	N19	C17	H172	266.8	218.1
O20	C16	N19	C12	180.0	180.5
N19	C16	C12	N7	9.8	347.8
N19	C16	C12	H121	135.1	227.9
N19	C16	C12	H122	244.6	107.5
C17	N19	C21	H211	307.8	330.0
C17	N19	C21	H212	198.4	210.1
C21	N19	C17	C16	179.2	179.7
C17	N19	C16	O20	179.7	184.2
C17	N19	C16	C12	359.8	3.7
N7	C13	C17	N19	297.2	46.7
N19	C17	C13	H131	171.9	287.1
N19	C17	C13	H132	62.5	166.4
C13	C17	N19	H171	234.7	239.7
C13	C17	N19	H172	125.3	120.3
H171	C17	N19	H172	250.6	240.6
O20	C16	N19	C17	179.7	184.2
N19	C16	O20	C12	180.0	179.5
O20	C16	C12	N7	189.9	167.3
O20	C16	C12	H121	315.1	47.4
O20	C16	C12	H122	64.6	287.0
C12	C16	N19	C17	359.8	3.7
N19	C16	C12	O20	180.0	180.5
N7	C12	C16	H121	234.7	119.9
N7	C12	C16	H122	125.2	240.3
C16	C12	N7	C13	312.9	42.5
C16	C12	N7	S4	178.4	222.5
H121	C12	C16	H122	250.5	120.3
C16	C12	N7	H121	125.2	240.0
C16	C12	N7	H122	234.8	119.6
H121	C12	N7	H122	109.6	239.6
C13	N7	C12	S4	134.6	180.0
C12	N7	C13	C17	72.1	298.5
C12	N7	C13	H131	197.4	58.1
C12	N7	C13	H132	306.9	178.9
C12	N7	S4	O8	187.8	22.6
C12	N7	S4	O9	313.5	157.4
C12	N7	S4	C1	71.0	270.1
C16	C12	H121	N7	231.1	119.6
C16	C12	H121	H122	115.5	239.9
N7	C12	H121	H122	244.4	120.3
H121	C12	N7	C13	187.7	162.6
H121	C12	N7	S4	53.1	342.6
C16	C12	H122	N7	128.9	240.6
C16	C12	H122	H121	244.5	120.4
N7	C12	H122	H121	115.6	239.7
H122	C12	N7	C13	78.1	282.9
H122	C12	N7	S4	303.6	102.9
N19	C17	C13	N7	297.2	46.7
C13	N7	C12	H121	187.7	162.6
C13	N7	C12	H122	78.1	282.9
C12	N7	C13	S4	226.0	180.0
C13	N7	S4	O8	57.0	202.6
C13	N7	S4	O9	182.7	337.4
C13	N7	S4	C1	300.2	90.1
C17	C13	N7	H131	234.8	240.4
C17	C13	N7	H132	125.2	119.6
N7	C13	C17	H171	172.0	286.4
N7	C13	C17	H172	62.5	167.0
H131	C13	N7	H132	250.5	239.2
S4	N7	C12	H121	53.1	342.6
S4	N7	C12	H122	303.6	102.9
C12	N7	S4	C13	130.8	180.0
S4	N7	C13	C17	206.1	118.5
S4	N7	C13	H131	331.4	238.1
S4	N7	C13	H132	80.9	358.9
O8	S4	N7	O9	234.3	225.2
O8	S4	N7	C1	116.8	112.5
O9	S4	N7	C1	242.5	247.3
N7	S4	C1	C3	274.1	89.6
N7	S4	C1	S2	93.8	270.0
N19	C17	C13	H171	125.3	120.3
N19	C17	C13	H172	234.7	239.7
C17	C13	N7	S4	206.1	118.5
N7	C13	C17	H131	125.3	119.6
N7	C13	C17	H132	234.7	240.3
H131	C13	C17	H132	109.5	120.7
H171	C17	C13	H172	109.5	119.4
H131	C13	N7	S4	331.4	238.1
N7	C13	H131	C17	244.5	241.3
N7	C13	H131	H132	122.3	120.7
C17	C13	H131	H132	237.8	239.4
H131	C13	C17	H171	46.7	166.8
H131	C13	C17	H172	297.2	47.4
H132	C13	N7	S4	80.9	358.9
N7	C13	H132	C17	115.4	118.7
N7	C13	H132	H131	237.7	239.3
C17	C13	H132	H131	122.2	120.6
H132	C13	C17	H171	297.2	46.1
H132	C13	C17	H172	187.8	286.7
N19	C17	H171	C13	234.4	238.7
N19	C17	H171	H172	117.1	119.4
H171	C17	C13	H131	46.7	166.8
H171	C17	C13	H132	297.2	46.1
C13	C17	H171	H172	242.8	240.6
N19	C17	H172	C13	125.7	121.3
N19	C17	H172	H171	242.9	240.6
H172	C17	C13	H131	297.2	47.4
H172	C17	C13	H132	187.8	286.7
C13	C17	H172	H171	117.2	119.4
N7	S4	O8	O9	117.1	123.2
N7	S4	O8	C1	243.8	246.3
O9	S4	O8	C1	126.7	123.2
O8	S4	C1	C3	161.5	337.1
O8	S4	C1	S2	341.2	157.5
N7	S4	O9	O8	244.3	236.9
N7	S4	O9	C1	117.4	113.7
O8	S4	O9	C1	233.0	236.8
O9	S4	C1	C3	29.6	202.3
O9	S4	C1	S2	209.3	22.6
N7	S4	C1	O8	112.6	112.5
N7	S4	C1	O9	244.5	247.3
O8	S4	C1	O9	131.9	134.8
C3	C1	S4	S2	180.3	179.7
S4	C1	C3	C6	179.7	179.9
S4	C1	C3	H3	359.7	0.0
S4	C1	S2	C5	180.4	180.0
S4	C1	C3	S2	179.7	180.3
C3	C1	S2	C5	0.1	0.3
C6	C3	C1	H3	180.0	179.8
C1	C3	C6	C5	0.0	0.4
C1	C3	C6	C11	180.1	180.2
S4	C1	S2	C3	180.3	179.7
S2	C1	C3	C6	359.9	359.6
S2	C1	C3	H3	180.0	179.8
C6	C5	S2	C1	359.9	359.9
C1	S2	C5	C10	180.0	180.1
C6	C3	C1	S2	359.9	359.6
C1	C3	C6	H3	180.0	180.2
C5	C6	C3	C11	179.9	180.2
C3	C6	C5	S2	0.1	359.8
C3	C6	C5	C10	180.0	179.7
C3	C6	C11	C15	179.8	180.3
C3	C6	C11	H11	359.9	0.3
H3	C3	C1	S2	180.0	179.8
C1	C3	H3	C6	180.0	179.8
H3	C3	C6	C5	180.0	180.2
H3	C3	C6	C11	0.0	0.0
C1	S2	C5	C6	359.9	359.9
C5	C6	C3	H3	180.0	180.2
C3	C6	C5	C11	180.1	179.8
C5	C6	C11	C15	359.9	0.1
C5	C6	C11	H11	179.9	180.1
S2	C5	C6	C10	180.1	180.1
C6	C5	C10	C14	0.3	0.1
C6	C5	C10	H10	180.2	180.0
C11	C6	C3	H3	0.0	0.0
C3	C6	C11	C5	179.9	180.2
C11	C6	C5	S2	180.0	180.0
C11	C6	C5	C10	359.9	359.9
C14	C15	C11	C6	0.1	360.0
C6	C11	C15	H15	180.2	179.9
C15	C11	C6	H11	180.0	179.9
S2	C5	C6	C11	180.0	180.0
C6	C5	S2	C10	179.9	179.9
S2	C5	C10	C14	180.1	180.0
S2	C5	C10	H10	0.1	359.9
C10	C5	C6	C11	359.9	359.9
C6	C5	C10	S2	180.1	180.2
C14	C10	C5	H10	180.0	180.1
C5	C10	C14	CL	179.5	180.0
C5	C10	C14	C15	359.8	359.9
C5	C10	C14	H10	180.0	179.9
CL	C14	C10	C15	179.7	180.1
C10	C14	C15	C11	0.0	0.0
C10	C14	C15	H15	180.0	180.1
C5	C10	H10	C14	180.0	180.1
H10	C10	C14	CL	359.5	0.1
H10	C10	C14	C15	179.8	180.0
CL	C14	C10	H10	359.5	0.1
C10	C14	CL	C15	180.3	179.9
CL	C14	C15	C11	180.3	180.0
CL	C14	C15	H15	0.3	360.0
C6	C11	C15	C14	0.1	360.0
C15	C14	C10	H10	179.8	180.0
C10	C14	C15	CL	179.7	180.1
C11	C15	C14	H15	180.0	180.0
C14	C15	C11	H11	180.1	179.9
C6	C11	C15	H11	180.0	180.1
C14	C15	C11	H15	180.0	180.0
C14	C15	H15	C11	180.1	180.0
H15	C15	C11	H11	0.1	359.9
C6	C11	H11	C15	180.0	179.9
H11	C11	C15	H15	0.1	359.9