PDB Chemical Component RTN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RTN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N7 C4 1.337 1.338
C4 C3 1.388 1.407
C4 C5 1.407 1.416
C10 C5 1.406 1.411
C5 C6 1.411 1.402
C6 C1 1.401 1.384
C6 H6 1.080 1.080
N28 C8 1.336 1.387
C8 N7 1.336 1.318
C8 C9 1.412 1.402
C9 C10 1.411 1.362
C10 H10 1.080 1.080
C12 C13 1.390 1.380
C13 C14 1.390 1.383
C13 H13 1.081 1.080
C16 C15 1.393 1.380
C15 C14 1.383 1.383
C15 H15 1.080 1.080
C17 C16 1.540 1.508
C17 H17 1.100 1.090
C17 H17A 1.100 1.090
C17 H17B 1.100 1.089
C19 C20 1.531 1.507
N21 C20 1.331 1.348
C20 O29 1.221 1.212
N21 C22 1.492 1.465
C22 C23 1.508 1.530
C22 C27 1.528 1.530
C22 H22 1.100 1.090
C23 C24 1.529 1.530
C24 C25 1.550 1.530
C24 H24 1.100 1.091
C24 H24A 1.100 1.090
C27 C26 1.557 1.530
C26 C25 1.526 1.530
C26 H26 1.100 1.091
C26 H26A 1.100 1.090
C23 H23 1.100 1.090
C23 H23A 1.100 1.091
C25 H25 1.099 1.089
C25 H25A 1.100 1.090
C27 H27 1.100 1.090
C27 H27A 1.100 1.090
N21 HN21 1.000 0.970
C18 C19 1.534 1.530
C19 H19 1.100 1.090
C19 H19A 1.100 1.090
C18 C9 1.539 1.507
C18 H18 1.099 1.091
C18 H18A 1.100 1.090
N28 HN28 1.000 0.970
N28 HN2A 1.001 0.970
C3 C2 1.389 1.359
C3 H3 1.080 1.079
C2 C1 1.397 1.404
C2 H2 1.080 1.080
C1 C11 1.395 1.484
C11 C16 1.409 1.393
C11 C12 1.395 1.394
C12 H12 1.080 1.079
C14 H14 1.080 1.081

Bond Angles for RTN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N7 C4 C3 118.4 120.7
C5 C4 C3 120.8 119.4
C4 C3 C2 119.3 120.1
C4 C3 H3 120.4 120.0
C4 C5 C6 119.3 119.7
C5 C6 C1 119.8 119.4
C5 C6 H6 120.1 120.3
C1 C6 H6 120.1 120.3
C6 C1 C2 119.4 120.5
C6 C1 C11 122.4 119.8
C9 C8 N7 120.5 121.6
C8 C9 C10 118.5 119.9
C8 C9 C18 123.6 120.1
C9 C10 H10 120.4 120.9
C12 C13 C14 120.1 120.1
C12 C13 H13 120.0 119.9
C14 C13 H13 120.0 120.0
C13 C14 C15 120.7 120.3
C13 C14 H14 119.7 119.9
C16 C15 H15 120.2 120.0
C14 C15 H15 120.2 119.9
C15 C14 H14 119.7 119.9
C16 C17 H17 109.5 109.5
C16 C17 H17A 109.5 109.4
C16 C17 H17B 109.5 109.5
C17 C16 C11 123.7 120.0
H17 C17 H17A 109.5 109.5
H17 C17 H17B 109.5 109.5
H17A C17 H17B 109.4 109.5
N21 C20 O29 125.0 120.0
N21 C22 H22 98.2 109.5
C23 C22 C27 106.6 109.5
C23 C22 H22 110.0 109.4
C22 C23 C24 104.6 109.5
C22 C23 H23 111.1 109.5
C22 C23 H23A 111.1 109.5
C27 C22 H22 109.2 109.5
C22 C27 C26 108.6 109.5
C22 C27 H27 109.8 109.5
C22 C27 H27A 109.7 109.5
C23 C24 C25 112.1 109.5
C23 C24 H24 108.6 109.4
C23 C24 H24A 108.6 109.5
C25 C24 H24 108.6 109.5
C25 C24 H24A 108.6 109.5
C24 C25 C26 114.0 109.5
C24 C25 H25 108.0 109.5
C24 C25 H25A 108.0 109.5
H24 C24 H24A 110.3 109.5
C27 C26 H26 108.2 109.4
C27 C26 H26A 108.2 109.5
C25 C26 H26 108.2 109.5
C25 C26 H26A 108.2 109.5
C26 C25 H25 108.0 109.5
C26 C25 H25A 108.0 109.4
H26 C26 H26A 110.7 109.4
H23 C23 H23A 107.8 109.4
H25 C25 H25A 110.9 109.5
H27 C27 H27A 109.2 109.5
C18 C19 H19 108.2 109.5
C18 C19 H19A 108.2 109.5
H19 C19 H19A 110.7 109.5
C9 C18 H18 108.9 109.5
C9 C18 H18A 108.9 109.5
H18 C18 H18A 110.0 109.4
HN28 N28 HN2A 109.4 120.0
C2 C3 H3 120.3 120.0
C3 C2 C1 121.4 120.9
C3 C2 H2 119.3 119.6
C1 C2 H2 119.3 119.5
C2 C1 C11 118.2 119.8
C1 C11 C16 125.0 120.1
C1 C11 C12 115.9 120.1
C12 C11 C16 119.1 119.8
C11 C12 H12 119.9 120.1

Torsion Angles for RTN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 C4 N7 C3 179.5 179.7
N7 C4 C3 C2 180.2 179.7
N7 C4 C3 H3 0.2 359.7
C3 C4 C5 C6 359.2 0.1
C2 C3 C4 H3 180.0 180.0
C4 C3 C2 C1 0.5 359.9
C4 C3 C2 H2 180.5 180.0
N7 C4 C5 C3 180.5 180.3
C5 C4 C3 C2 0.7 0.0
C5 C4 C3 H3 180.7 180.0
C4 C5 C6 C1 359.6 359.9
C4 C5 C6 H6 179.6 180.0
C10 C5 C4 C3 180.3 180.0
C10 C5 C6 C1 178.6 180.0
C10 C5 C6 H6 358.6 0.0
C6 C5 C4 C3 359.2 0.1
C1 C6 C5 H6 180.0 180.0
C5 C6 C1 C2 1.6 0.0
C5 C6 C1 C11 178.7 180.0
C5 C6 C1 H6 180.0 180.0
C3 C2 C1 C6 358.3 0.0
C6 C1 C2 H2 178.3 180.0
C2 C1 C6 C11 182.8 180.0
C6 C1 C11 C16 65.8 130.0
C6 C1 C11 C12 245.8 310.8
C5 C6 H6 C1 180.0 180.0
H6 C6 C1 C2 181.5 180.0
H6 C6 C1 C11 358.7 360.0
C8 N7 C4 C3 180.5 179.7
N7 C8 C9 C10 0.7 359.7
N7 C8 C9 C18 179.6 179.9
C8 C9 C10 H10 180.0 180.0
C8 C9 C18 H18 160.5 160.0
C8 C9 C18 H18A 40.5 40.1
C10 C9 C8 N7 0.7 359.7
C8 C9 C10 C18 179.0 180.2
C14 C13 C12 H13 180.0 180.4
C12 C13 C14 C15 359.3 359.7
C12 C13 C14 H14 179.3 179.7
C12 C13 C14 H13 180.0 179.6
C13 C14 C15 H15 180.9 180.0
C15 C14 C13 H14 180.0 180.0
C12 C13 H13 C14 180.0 180.4
H13 C13 C14 C15 179.3 180.1
H13 C13 C14 H14 359.3 0.1
C14 C15 C16 H15 180.0 180.0
C16 C15 C14 H14 180.9 180.0
C15 C14 C13 H13 179.3 180.1
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 H15 180.0 180.0
H15 C15 C14 H14 0.9 360.0
C17 C16 C15 H15 359.6 0.5
H17 C17 C16 H17A 240.0 240.0
H17 C17 C16 H17B 120.0 120.1
H17A C17 C16 H17B 240.0 240.0
C1 C11 C16 C17 0.2 0.0
C12 C11 C16 C17 180.3 179.3
C16 C17 H17 H17A 120.0 119.9
C16 C17 H17 H17B 240.0 240.0
H17 C17 C16 C11 270.3 90.0
H17A C17 H17 H17B 120.0 120.0
C16 C17 H17A H17 240.0 240.0
C16 C17 H17A H17B 120.0 119.9
H17A C17 C16 C11 30.3 210.0
H17 C17 H17A H17B 240.0 239.9
C16 C17 H17B H17 120.0 120.0
C16 C17 H17B H17A 240.0 240.1
H17B C17 C16 C11 150.3 329.9
H17 C17 H17B H17A 120.0 120.1
C22 N21 C20 O29 6.6 0.1
C23 C22 N21 H22 117.0 120.0
N21 C22 C23 H23 325.4 300.0
N21 C22 C23 H23A 85.4 60.0
C27 C22 N21 H22 243.6 240.0
N21 C22 C27 H27 280.6 300.0
N21 C22 C27 H27A 40.6 60.0
N21 C22 C23 H22 249.8 240.0
C27 C22 C23 H22 118.3 120.0
C23 C22 C27 C26 291.7 300.0
C23 C22 C27 H27 51.7 60.0
C23 C22 C27 H27A 171.7 180.0
C22 C23 C24 C25 297.9 300.0
C22 C23 C24 H24 57.9 60.0
C22 C23 C24 H24A 177.9 180.0
H23 C23 C22 H23A 240.0 240.0
N21 C22 C27 H22 110.1 120.0
C23 C22 C27 H22 241.2 240.1
C27 C22 C23 C24 74.0 60.0
C27 C22 C23 H23 194.0 180.0
C27 C22 C23 H23A 314.0 300.0
C22 C27 C26 H26 169.6 300.0
C22 C27 C26 H26A 289.6 180.0
H27 C27 C22 H27A 240.0 240.0
C23 C22 H22 C27 116.6 120.0
H22 C22 C23 C24 315.7 300.0
H22 C22 C23 H23 75.7 60.1
H22 C22 C23 H23A 195.7 180.0
H22 C22 C27 C26 50.5 60.0
H22 C22 C27 H27 170.5 180.0
H22 C22 C27 H27A 290.5 299.9
C24 C23 C22 C27 74.0 60.0
C24 C23 C22 H22 315.7 300.0
C22 C23 C24 H23 120.0 120.0
C22 C23 C24 H23A 240.0 240.0
C25 C24 C23 H24 240.0 240.0
C25 C24 C23 H24A 120.0 120.0
C23 C24 C25 C26 45.5 60.0
C23 C24 C25 H25 165.5 180.0
C23 C24 C25 H25A 285.5 300.0
H24 C24 C23 H24A 240.0 240.0
C23 C24 C25 H24 120.0 120.0
C23 C24 C25 H24A 240.0 240.0
H24 C24 C25 H24A 120.0 120.0
C24 C25 C26 H26 201.4 60.0
C24 C25 C26 H26A 81.4 180.0
C26 C25 C24 H25 240.0 240.0
C26 C25 C24 H25A 120.0 119.9
H25 C25 C24 H25A 240.0 240.0
C23 C24 H24 C25 237.8 240.0
C23 C24 H24 H24A 118.9 120.0
C25 C24 H24 H24A 241.1 240.0
H24 C24 C25 C26 285.5 300.0
H24 C24 C25 H25 45.5 60.0
H24 C24 C25 H25A 165.5 180.1
C23 C24 H24A C25 122.2 120.0
C23 C24 H24A H24 241.1 240.0
C25 C24 H24A H24 118.9 120.0
H24A C24 C25 C26 165.5 180.0
H24A C24 C25 H25 285.5 300.0
H24A C24 C25 H25A 45.5 60.1
C26 C27 C22 H22 50.5 60.0
C22 C27 C26 H27 120.0 120.0
C22 C27 C26 H27A 240.0 240.0
C25 C26 C27 H26 240.0 120.0
C25 C26 C27 H26A 120.0 240.0
C27 C26 C25 H25 201.4 180.0
C27 C26 C25 H25A 81.4 60.0
H26 C26 C27 H26A 240.0 120.0
C22 C27 C26 C25 49.6 60.0
C26 C25 C24 H24 285.5 300.0
C26 C25 C24 H24A 165.5 180.0
C24 C25 C26 H25 120.0 120.0
C24 C25 C26 H25A 240.0 240.0
C27 C26 C25 H26 120.0 240.0
C27 C26 C25 H26A 240.0 120.1
H26 C26 C25 H26A 120.0 240.0
H25 C25 C26 H25A 120.0 120.0
C27 C26 H26 H26A 118.5 240.0
C25 C26 H26 H26A 241.6 120.0
H26 C26 C25 H25 81.4 300.0
H26 C26 C25 H25A 321.4 180.0
C27 C26 H26A H26 241.5 120.0
C25 C26 H26A H26 118.4 240.0
H26A C26 C25 H25 321.4 59.9
H26A C26 C25 H25A 201.4 299.9
H23 C23 C22 C27 194.0 180.0
H23 C23 C22 H22 75.7 60.1
C22 C23 H23 C24 243.9 240.0
C22 C23 H23 H23A 121.9 120.0
H23 C23 C24 C25 177.9 180.0
H23 C23 C24 H24 297.9 300.0
H23 C23 C24 H24A 57.9 59.9
H23A C23 C22 C27 314.0 300.0
H23A C23 C22 H22 195.7 180.0
C22 C23 H23A C24 116.1 120.0
C22 C23 H23A H23 238.1 240.0
H23A C23 C24 C25 57.9 60.0
H23A C23 C24 H24 177.9 180.0
H23A C23 C24 H24A 297.9 300.0
H25 C25 C24 H24 45.5 60.0
H25 C25 C24 H24A 285.5 300.0
C24 C25 H25 C26 236.3 240.0
C24 C25 H25 H25A 118.1 120.0
H25 C25 C26 H26 81.4 300.0
H25 C25 C26 H26A 321.4 59.9
C26 C25 H25 H25A 241.8 240.0
H25A C25 C24 H24 165.5 180.1
H25A C25 C24 H24A 45.5 60.1
C24 C25 H25A C26 123.7 120.0
C24 C25 H25A H25 241.9 240.0
H25A C25 C26 H26 321.4 180.0
H25A C25 C26 H26A 201.4 299.9
C26 C25 H25A H25 118.2 120.0
H27 C27 C22 H22 170.5 180.0
C22 C27 H27 C26 240.7 240.0
C22 C27 H27 H27A 120.4 120.0
H27 C27 C26 H26 49.6 180.0
H27 C27 C26 H26A 169.6 60.0
H27A C27 C22 H22 290.5 299.9
C22 C27 H27A C26 119.3 120.0
C22 C27 H27A H27 239.6 240.0
H27A C27 C26 H26 289.6 60.0
H27A C27 C26 H26A 49.6 300.1
HN21 N21 C20 O29 186.6 180.0
HN21 N21 C22 H22 329.7 215.1
C8 C9 C18 C19 280.6 280.0
H19 C19 C18 H19A 120.0 120.1
C18 C19 H19 H19A 241.5 240.0
C18 C19 H19A H19 118.5 120.0
C18 C9 C8 N7 179.6 179.9
C8 C9 C18 C10 181.1 179.8
C18 C9 C10 H10 1.0 359.8
C9 C18 C19 H19 203.0 60.0
C9 C18 C19 H19A 83.0 300.0
H18 C18 C9 H18A 120.0 119.9
H18 C18 C19 H19 323.0 180.0
H18 C18 C19 H19A 203.0 60.0
C9 C18 H18 H18A 240.7 240.0
H18A C18 C19 H19 83.0 300.0
H18A C18 C19 H19A 323.0 179.9
C9 C18 H18A H18 119.3 120.0
C4 C3 C2 H3 180.0 180.0
C6 C1 C2 C3 358.3 0.0
C1 C2 C3 H2 180.0 180.0
C3 C2 C1 C11 181.1 180.1
C4 C3 H3 C2 180.0 180.0
H3 C3 C2 C1 180.5 180.0
H3 C3 C2 H2 0.5 0.0
C2 C1 C6 H6 181.5 180.0
C6 C1 C2 C11 177.3 180.0
C1 C2 C3 H3 180.5 180.0
C3 C2 C1 H2 180.0 180.0
C2 C1 C11 C16 243.0 310.0
C2 C1 C11 C12 63.0 130.8
H2 C2 C3 H3 0.5 0.0
C3 C2 H2 C1 180.0 180.0
H2 C2 C1 C11 1.1 0.0
C11 C1 C6 H6 358.7 360.0
C6 C1 C11 C2 182.8 180.0
C17 C16 C11 C1 0.2 0.0
C11 C1 C2 H2 1.1 0.0
C12 C11 C1 C16 180.0 180.7
C1 C11 C12 H12 359.4 359.8
C11 C16 C15 H15 179.1 180.6
C11 C16 C17 H17 270.3 90.0
C11 C16 C17 H17A 30.3 210.0
C11 C16 C17 H17B 150.3 329.9
C1 C11 C16 C12 180.0 180.7
C16 C11 C12 H12 179.4 180.5
C11 C12 C13 C14 0.6 0.0
C11 C12 C13 H13 180.6 179.7
C17 C16 C11 C12 180.3 179.3
C1 C11 C12 C16 180.0 179.3
H12 C12 C13 C14 180.6 180.0
H12 C12 C13 H13 0.6 359.6
H12 C12 C11 C16 179.4 180.5
H14 C14 C13 H13 359.3 0.1
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 H15 0.9 360.0