PDB Chemical Component RQ3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RQ3

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O2	1.258	1.342
C1	O3	1.254	1.209
C1	C4	1.502	1.507
O2	HO2	0.951	0.967
C4	C5	1.528	1.529
C4	C6	1.546	1.530
C4	O7	1.452	1.428
C5	H51	1.115	1.090
C5	H52	1.114	1.090
C5	H53	1.115	1.089
C6	H61	1.115	1.090
C6	H62	1.115	1.091
C6	H63	1.115	1.089
O7	C8	1.489	1.358
C8	C9	1.393	1.386
C8	C12	1.398	1.387
C9	C10	1.379	1.381
C9	H91	1.103	1.081
C10	C11	1.379	1.383
C10	H101	1.103	1.080
C11	C13	1.386	1.383
C11	C14	1.431	1.506
C12	C13	1.401	1.382
C12	H121	1.103	1.080
C13	H131	1.103	1.080
C14	C15	1.541	1.506
C14	H141	1.114	1.089
C14	H142	1.115	1.090
C15	O16	1.230	1.213
C15	N17	1.327	1.348
N17	C18	1.380	1.399
N17	H171	1.020	0.971
C18	C19	1.404	1.388
C18	C22	1.386	1.388
C19	C20	1.385	1.380
C19	H191	1.103	1.080
C20	C21	1.389	1.383
C20	C24	1.496	1.506
C21	C23	1.394	1.382
C21	H211	1.104	1.080
C22	C23	1.370	1.381
C22	H221	1.103	1.080
C23	C25	1.499	1.507
C24	H241	1.115	1.090
C24	H242	1.114	1.090
C24	H243	1.115	1.090
C25	H251	1.115	1.090
C25	H252	1.115	1.090
C25	H253	1.115	1.090

Bond Angles for RQ3

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	O3	122.2	120.0
O2	C1	C4	118.5	120.0
C1	O2	HO2	122.2	119.9
O3	C1	C4	119.4	120.0
C1	C4	C5	108.0	109.5
C1	C4	C6	110.5	109.5
C1	C4	O7	108.6	109.5
C5	C4	C6	108.8	109.5
C5	C4	O7	108.5	109.5
C4	C5	H51	108.0	109.5
C4	C5	H52	112.7	109.5
C4	C5	H53	112.7	109.5
C6	C4	O7	112.3	109.5
C4	C6	H61	110.5	109.4
C4	C6	H62	111.8	109.5
C4	C6	H63	111.8	109.5
C4	O7	C8	126.1	106.8
H51	C5	H52	112.8	109.4
H51	C5	H53	112.7	109.5
H52	C5	H53	97.7	109.5
H61	C6	H62	111.8	109.5
H61	C6	H63	111.9	109.5
H62	C6	H63	98.6	109.5
O7	C8	C9	118.1	120.1
O7	C8	C12	122.5	120.1
C9	C8	C12	119.4	119.8
C8	C9	C10	120.4	120.0
C8	C9	H91	120.3	120.0
C8	C12	C13	119.6	120.0
C8	C12	H121	120.1	120.0
C10	C9	H91	119.3	120.0
C9	C10	C11	120.5	120.0
C9	C10	H101	119.7	120.0
C11	C10	H101	119.7	119.9
C10	C11	C13	120.2	120.1
C10	C11	C14	119.4	120.0
C13	C11	C14	120.5	120.0
C11	C13	C12	119.9	120.0
C11	C13	H131	119.5	120.0
C11	C14	C15	113.8	109.5
C11	C14	H141	110.7	109.5
C11	C14	H142	110.7	109.5
C13	C12	H121	120.3	120.0
C12	C13	H131	120.6	120.0
C15	C14	H141	110.6	109.5
C15	C14	H142	110.6	109.5
C14	C15	O16	120.2	120.0
C14	C15	N17	116.4	120.0
H141	C14	H142	99.6	109.4
O16	C15	N17	121.7	120.0
C15	N17	C18	125.9	120.0
C15	N17	H171	114.9	120.0
C18	N17	H171	119.2	120.0
N17	C18	C19	120.6	120.1
N17	C18	C22	119.0	120.0
C19	C18	C22	119.8	119.9
C18	C19	C20	119.9	120.0
C18	C19	H191	120.8	120.0
C18	C22	C23	120.3	119.9
C18	C22	H221	120.5	120.1
C20	C19	H191	119.3	120.0
C19	C20	C21	119.6	120.0
C19	C20	C24	120.1	120.0
C21	C20	C24	120.2	120.0
C20	C21	C23	120.2	120.2
C20	C21	H211	119.7	119.9
C20	C24	H241	120.1	109.5
C20	C24	H242	108.4	109.5
C20	C24	H243	108.4	109.5
C23	C21	H211	120.1	120.0
C21	C23	C22	120.2	120.1
C21	C23	C25	120.4	120.0
C23	C22	H221	119.2	120.0
C22	C23	C25	119.3	120.0
C23	C25	H251	120.5	109.5
C23	C25	H252	108.3	109.5
C23	C25	H253	108.3	109.5
H241	C24	H242	108.4	109.5
H241	C24	H243	108.3	109.5
H242	C24	H243	101.6	109.4
H251	C25	H252	108.3	109.5
H251	C25	H253	108.3	109.5
H252	C25	H253	101.6	109.4

Torsion Angles for RQ3

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O3	C1	O2	C4	178.6	179.9
O2	C1	C4	C5	273.9	60.0
O2	C1	C4	C6	155.0	300.0
O2	C1	C4	O7	31.4	180.0
O2	C1	O3	C4	181.4	180.1
O3	C1	O2	HO2	180.0	359.9
O3	C1	C4	C5	95.3	240.0
O3	C1	C4	C6	336.4	120.0
O3	C1	C4	O7	212.8	0.1
O2	C1	C4	O3	178.7	179.9
C4	C1	O2	HO2	1.4	180.0
C5	C4	C1	C6	118.9	120.0
C5	C4	C1	O7	242.5	240.0
C1	C4	C5	H51	180.0	67.1
C1	C4	C5	H52	305.3	187.0
C1	C4	C5	H53	54.7	307.0
C6	C4	C1	O7	123.6	120.0
C1	C4	C6	H61	180.0	293.1
C1	C4	C6	H62	305.2	53.1
C1	C4	C6	H63	54.7	173.1
C1	C4	O7	C8	73.0	177.3
HO2	O2	C1	O3	180.0	359.9
HO2	O2	C1	C4	1.4	180.0
C1	C4	C5	C6	240.0	240.0
C1	C4	C5	O7	117.6	120.0
C6	C4	C5	O7	237.6	240.0
C5	C4	C6	H61	61.6	173.1
C5	C4	C6	H62	186.8	293.1
C5	C4	C6	H63	296.3	53.1
C5	C4	O7	C8	190.2	297.3
H51	C5	C4	H52	234.7	240.1
H51	C5	C4	H53	125.2	120.1
H52	C5	C4	H53	250.5	240.0
C1	C4	C6	C5	118.4	120.0
C1	C4	C6	O7	238.5	240.0
C5	C4	C6	O7	120.1	120.0
C6	C4	C5	H51	300.0	187.1
C6	C4	C5	H52	65.3	307.0
C6	C4	C5	H53	174.7	67.0
C6	C4	O7	C8	310.4	57.3
H61	C6	C4	H62	234.8	240.0
H61	C6	C4	H63	125.3	120.0
H62	C6	C4	H63	250.5	240.0
C1	C4	O7	C5	242.8	240.0
C1	C4	O7	C6	122.6	120.0
C5	C4	O7	C6	239.7	240.0
O7	C4	C5	H51	62.4	307.1
O7	C4	C5	H52	187.7	67.0
O7	C4	C5	H53	297.2	187.0
O7	C4	C6	H61	301.5	53.1
O7	C4	C6	H62	66.7	173.1
O7	C4	C6	H63	176.2	293.1
C4	O7	C8	C9	153.6	269.8
C4	O7	C8	C12	332.7	89.8
H51	C5	C4	C6	300.0	187.1
H51	C5	C4	O7	62.4	307.1
C4	C5	H51	H52	125.3	119.9
C4	C5	H51	H53	234.8	239.9
H52	C5	H51	H53	109.5	120.0
H52	C5	C4	C6	65.3	307.0
H52	C5	C4	O7	187.7	67.0
C4	C5	H52	H51	237.3	240.1
C4	C5	H52	H53	118.7	120.1
H51	C5	H52	H53	241.3	240.0
H53	C5	C4	C6	174.7	67.0
H53	C5	C4	O7	297.2	187.0
C4	C5	H53	H51	122.6	120.1
C4	C5	H53	H52	241.3	240.0
H51	C5	H53	H52	118.7	119.9
H61	C6	C4	O7	301.5	53.1
C4	C6	H61	H62	125.2	120.0
C4	C6	H61	H63	234.8	240.0
H62	C6	H61	H63	109.6	120.0
H62	C6	C4	O7	66.7	173.1
C4	C6	H62	H61	235.5	240.0
C4	C6	H62	H63	117.7	120.0
H61	C6	H62	H63	242.2	240.0
H63	C6	C4	O7	176.2	293.1
C4	C6	H63	H61	124.5	120.0
C4	C6	H63	H62	242.3	240.0
H61	C6	H63	H62	117.8	120.0
C9	C8	O7	C12	180.8	180.0
O7	C8	C9	C10	179.1	180.1
O7	C8	C9	H91	359.2	0.1
O7	C8	C12	C13	180.9	179.7
O7	C8	C12	H121	0.8	360.0
O7	C8	C9	C12	179.2	180.0
C9	C8	C12	C13	0.0	359.7
C9	C8	C12	H121	180.0	180.0
C10	C9	C8	H91	180.0	180.0
C8	C9	C10	C11	359.9	360.0
C8	C9	C10	H101	180.0	180.0
O7	C8	C12	C9	180.9	180.0
C12	C8	C9	C10	360.0	0.0
C12	C8	C9	H91	180.0	180.0
C11	C13	C12	C8	0.0	0.5
C13	C12	C8	H121	180.1	179.7
C8	C12	C13	H131	180.0	180.0
C10	C9	C8	C12	360.0	0.0
C8	C9	C10	H91	180.0	180.0
C11	C10	C9	H101	180.0	180.0
C9	C10	C11	C13	0.2	0.3
C9	C10	C11	C14	180.8	180.0
H91	C9	C8	C12	180.0	180.0
C8	C9	H91	C10	180.0	180.0
H91	C9	C10	C11	179.9	180.0
H91	C9	C10	H101	360.0	360.0
C11	C10	C9	H91	179.9	180.0
C9	C10	C11	H101	180.0	180.0
C13	C11	C10	C14	179.3	180.2
C10	C11	C13	C12	359.9	359.5
C10	C11	C13	H131	179.9	180.0
C10	C11	C14	C15	78.0	90.0
C10	C11	C14	H141	203.3	329.9
C10	C11	C14	H142	312.7	210.0
H101	C10	C9	H91	360.0	360.0
C9	C10	H101	C11	180.0	180.0
H101	C10	C11	C13	180.1	180.3
H101	C10	C11	C14	0.8	0.0
C8	C12	C13	C11	0.0	0.5
C13	C11	C10	H101	180.1	180.3
C10	C11	C13	C14	180.7	179.8
C13	C11	C14	C15	258.7	269.8
C13	C11	C14	H141	23.9	149.7
C13	C11	C14	H142	133.4	29.7
C11	C13	C12	H121	180.1	180.2
C12	C13	C11	H131	180.0	179.5
C14	C11	C10	H101	0.8	0.0
C10	C11	C14	C13	179.3	180.2
C14	C11	C13	C12	179.2	179.7
C14	C11	C13	H131	359.2	0.2
C15	C14	C11	H141	234.7	120.1
C15	C14	C11	H142	125.3	240.0
C11	C14	C15	O16	2.6	360.0
C11	C14	C15	N17	196.9	180.0
H141	C14	C11	H142	250.5	119.9
C8	C12	C13	H121	179.9	180.3
C12	C13	C11	C14	179.2	179.7
C11	C13	C12	H131	180.0	180.5
C8	C12	H121	C13	180.1	179.7
H121	C12	C13	H131	0.1	359.7
H131	C13	C11	C14	359.2	0.2
C11	C13	H131	C12	180.0	179.5
H131	C13	C12	H121	0.1	359.7
C11	C14	C15	H141	125.3	239.9
C11	C14	C15	H142	234.7	120.0
H141	C14	C15	H142	109.5	240.1
O16	C15	C14	N17	165.7	180.0
C14	C15	N17	C18	180.2	184.6
C14	C15	N17	H171	0.3	4.6
C11	C14	H141	C15	233.0	120.1
C11	C14	H141	H142	116.5	240.0
C15	C14	H141	H142	243.5	120.0
H141	C14	C15	O16	237.3	120.1
H141	C14	C15	N17	71.6	300.1
C11	C14	H142	C15	127.0	240.0
C11	C14	H142	H141	243.5	120.0
C15	C14	H142	H141	116.5	240.0
H142	C14	C15	O16	127.9	240.0
H142	C14	C15	N17	322.1	60.0
O16	C15	C14	H141	237.3	120.1
O16	C15	C14	H142	127.9	240.0
C14	C15	O16	N17	195.1	180.0
O16	C15	N17	C18	14.7	4.6
O16	C15	N17	H171	194.8	184.6
N17	C15	C14	H141	71.6	300.1
N17	C15	C14	H142	322.1	60.0
C14	C15	N17	O16	165.5	180.0
C18	N17	C15	H171	180.0	180.0
C15	N17	C18	C19	320.8	214.3
C15	N17	C18	C22	150.7	34.1
C15	N17	C18	H171	180.0	180.0
C19	C18	N17	C22	170.1	180.2
N17	C18	C19	C20	190.2	180.3
N17	C18	C19	H191	10.2	359.8
N17	C18	C22	C23	169.9	180.0
N17	C18	C22	H221	349.9	0.1
C15	N17	H171	C18	180.0	180.0
H171	N17	C18	C19	140.8	34.3
H171	N17	C18	C22	330.7	214.1
C19	C18	N17	H171	140.8	34.3
N17	C18	C19	C22	190.0	179.8
C19	C18	C22	C23	359.7	359.8
C19	C18	C22	H221	179.7	179.8
C20	C19	C18	H191	180.0	180.5
C18	C19	C20	C21	0.0	359.5
C18	C19	C20	C24	180.3	179.8
C22	C18	N17	H171	330.7	214.1
N17	C18	C22	C19	170.2	180.2
C22	C18	C19	C20	0.2	0.5
C22	C18	C19	H191	180.2	180.0
C21	C23	C22	C18	0.1	0.0
C23	C22	C18	H221	180.0	179.9
C18	C22	C23	C25	179.7	180.0
C20	C19	C18	C22	0.2	0.5
C18	C19	C20	H191	180.0	179.5
C21	C20	C19	C24	179.7	179.7
C19	C20	C21	C23	359.8	0.3
C19	C20	C21	H211	179.8	180.3
C19	C20	C24	H241	180.0	269.7
C19	C20	C24	H242	305.2	29.7
C19	C20	C24	H243	54.7	149.7
H191	C19	C18	C22	180.2	180.0
C18	C19	H191	C20	180.0	180.5
H191	C19	C20	C21	180.0	180.0
H191	C19	C20	C24	0.3	0.3
C21	C20	C19	H191	180.0	180.0
C19	C20	C21	C24	180.3	180.3
C21	C20	C24	H241	0.3	90.0
C21	C20	C24	H242	125.5	210.0
C21	C20	C24	H243	235.0	330.0
C23	C21	C20	H211	180.0	180.0
C20	C21	C23	C22	0.2	360.0
C20	C21	C23	C25	180.5	180.0
C24	C20	C19	H191	0.3	0.3
C19	C20	C24	C21	179.7	179.7
C24	C20	C21	C23	179.5	180.0
C24	C20	C21	H211	359.5	0.0
H241	C24	C20	H242	234.7	240.0
H241	C24	C20	H243	125.2	120.0
H242	C24	C20	H243	250.5	240.1
C18	C22	C23	C21	0.1	0.0
C23	C21	C20	C24	179.5	180.0
C20	C21	C23	H211	180.0	180.0
C21	C23	C22	H221	180.1	179.9
C22	C23	C21	C25	179.7	180.0
C21	C23	C25	H251	180.0	90.0
C21	C23	C25	H252	305.3	210.0
C21	C23	C25	H253	54.7	330.0
H211	C21	C20	C24	359.5	0.0
C20	C21	H211	C23	180.0	180.0
H211	C21	C23	C22	180.2	179.9
H211	C21	C23	C25	0.5	360.0
C18	C22	C23	H221	180.0	180.1
C22	C23	C21	H211	180.2	179.9
C21	C23	C22	C25	180.3	180.0
C22	C23	C25	H251	0.3	270.1
C22	C23	C25	H252	125.6	30.1
C22	C23	C25	H253	235.0	150.0
C18	C22	H221	C23	180.0	179.9
H221	C22	C23	C25	359.7	359.9
C25	C23	C21	H211	0.5	360.0
C21	C23	C25	C22	179.7	180.0
C25	C23	C22	H221	359.7	359.9
H251	C25	C23	H252	234.7	240.0
H251	C25	C23	H253	125.3	120.0
H252	C25	C23	H253	250.6	240.0
C20	C24	H241	H242	125.3	120.0
C20	C24	H241	H243	234.7	240.0
H242	C24	H241	H243	109.4	120.0
C20	C24	H242	H241	228.1	240.0
C20	C24	H242	H243	114.1	120.0
H241	C24	H242	H243	246.0	240.0
C20	C24	H243	H241	131.9	120.0
C20	C24	H243	H242	245.9	240.0
H241	C24	H243	H242	114.0	120.0
C23	C25	H251	H252	125.3	120.0
C23	C25	H251	H253	234.7	240.0
H252	C25	H251	H253	109.4	120.0
C23	C25	H252	H251	227.8	240.0
C23	C25	H252	H253	113.9	120.0
H251	C25	H252	H253	246.1	240.0
C23	C25	H253	H251	132.2	120.0
C23	C25	H253	H252	246.1	240.0
H251	C25	H253	H252	113.9	120.0