PDB Chemical Component RPL

Ideal Model

Chemical Description

Name (C8-S)-HYDANTOCIDIN 5'-PHOSPHATE
Synonyms [8,9-DIHYDROXY-3-(4-CARBOXY-HYDROXY-HYDROXYMETHYL-AMINO-BUTYL)-2,4-DIOXO-6-OXA-1,3-DIAZA-SPIRO[4.4]NON-7-YLMETHYL] PHOSPHATE
Formula C13 H22 N3 O13 P
Formal charge 0
Molecular weight 459.300 g/mol
Component type NON-POLYMER

Chemical features

Atom count 52
Chiral atom count 5
Chiral atoms C4' C3' C2' C1' C8A
Bond count 53
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-{(5S,7R,8S,9R)-8,9-dihydroxy-2,4-dioxo-7-[(phosphonooxy)methyl]-6-oxa-1,3-diazaspiro[4.4]non-3-yl}-N-hydroxy-N-(hydroxymethyl)-L-norvaline
Systematic name (OpenEye OEToolkits) (2S)-5-[(2R,3S,4R,5S)-3,4-dihydroxy-7,9-dioxo-2-(phosphonooxymethyl)-1-oxa-6,8-diazaspiro[4.4]nonan-8-yl]-2-(hydroxy-(hydroxymethyl)amino)pentanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) OCN(O)[C@@H](CCCN1C(=O)N[C@@]2(O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O)C1=O)C(O)=O
SMILES (CACTVS) OCN(O)[CH](CCCN1C(=O)N[C]2(O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O)C1=O)C(O)=O
Stereo SMILES (OpenEye) C(C[C@@H](C(=O)O)[N@](CO)O)CN1C(=O)[C@@]2([C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)NC1=O
InChI descriptor InChI=1S/C13H22N3O13P/c17-5-16(24)6(10(20)21)2-1-3-15-11(22)13(14-12(15)23)9(19)8(18)7(29-13)4-28-30(25,26)27/h6-9,17-19,24H,1-5H2,(H,14,23)(H,20,21)(H2,25,26,27)/t6-,7+,8+,9+,13-/m0/s1
InChIKey descriptor MAXSFYCTFIBEAR-FUIMDIGMSA-N

Status Information

Last modified 2020-06-17
Created 1999-07-08
Release status REL
Model PDB code 1QF5
Processing site EBI