PDB Chemical Component RO7

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RO7

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C25	C7	1.506	1.507
C7	O3	1.359	1.348
C7	C4	1.476	1.345
O3	C2	1.384	1.344
C2	C16	1.397	1.478
C2	N1	1.368	1.313
C16	C26	1.402	1.396
C16	C27	1.403	1.395
C26	C29	1.401	1.379
C29	C31	1.412	1.384
C31	C30	1.396	1.384
C30	C27	1.400	1.380
N1	C4	1.341	1.342
C4	C20	1.494	1.508
C20	C23	1.511	1.530
C23	O22	1.413	1.429
O22	C13	1.359	1.359
C13	C19	1.402	1.376
C13	C5	1.461	1.416
C19	C17	1.407	1.387
C17	C8	1.416	1.374
C5	C15	1.445	1.454
C5	C6	1.447	1.396
C15	C12	1.403	1.319
C12	S9	1.706	1.753
C6	S9	1.640	1.760
C6	C8	1.494	1.400
C8	C11	1.513	1.507
C11	C14	1.533	1.529
C14	O24	1.443	1.429
C14	C10	1.498	1.507
O24	C28	1.441	1.429
C10	O21	1.232	1.342
C10	O18	1.231	1.208
C25	H25	1.100	1.090
C25	H25A	1.100	1.090
C25	H25B	1.099	1.089
C26	H26	1.080	1.079
C29	H29	1.080	1.080
C31	H31	1.080	1.080
C30	H30	1.080	1.080
C27	H27	1.080	1.079
C20	H20	1.100	1.089
C20	H20A	1.099	1.090
C23	H23	1.100	1.090
C23	H23A	1.100	1.089
C19	H19	1.080	1.080
C17	H17	1.080	1.080
C15	H15	1.080	1.080
C12	H12	1.081	1.079
C11	H11	1.100	1.090
C11	H11A	1.099	1.090
C14	H14	1.100	1.090
C28	H28	1.100	1.090
C28	H28A	1.100	1.090
C28	H28B	1.100	1.091
O21	HO21	0.950	0.967

Bond Angles for RO7

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C25	C7	O3	119.4	126.4
C25	C7	C4	131.5	126.3
C7	C25	H25	109.5	109.5
C7	C25	H25A	109.5	109.5
C7	C25	H25B	109.5	109.5
O3	C7	C4	109.1	107.3
C7	O3	C2	103.7	107.7
C7	C4	N1	106.8	107.9
C7	C4	C20	123.1	126.1
O3	C2	C16	130.1	125.7
O3	C2	N1	114.0	108.6
C16	C2	N1	115.8	125.7
C2	C16	C26	121.7	120.2
C2	C16	C27	118.9	120.1
C2	N1	C4	106.4	108.6
C26	C16	C27	119.5	119.7
C16	C26	C29	121.0	119.8
C16	C26	H26	119.5	120.1
C16	C27	C30	120.2	119.8
C16	C27	H27	119.9	120.1
C26	C29	C31	118.7	120.2
C29	C26	H26	119.5	120.1
C26	C29	H29	120.6	119.9
C29	C31	C30	120.6	120.3
C31	C29	H29	120.6	119.9
C29	C31	H31	119.7	119.9
C31	C30	C27	120.0	120.1
C30	C31	H31	119.7	119.8
C31	C30	H30	120.0	120.0
C27	C30	H30	120.0	119.9
C30	C27	H27	119.9	120.0
N1	C4	C20	130.2	126.0
C4	C20	C23	111.0	109.5
C4	C20	H20	109.0	109.5
C4	C20	H20A	108.6	109.4
C20	C23	O22	108.1	109.4
C23	C20	H20	109.0	109.5
C23	C20	H20A	108.6	109.5
C20	C23	H23	109.9	109.5
C20	C23	H23A	110.2	109.5
C23	O22	C13	119.9	117.0
O22	C23	H23	109.9	109.5
O22	C23	H23A	110.2	109.5
O22	C13	C19	122.4	119.9
O22	C13	C5	116.7	119.9
C19	C13	C5	120.9	120.2
C13	C19	C17	120.9	120.4
C13	C19	H19	119.6	119.8
C13	C5	C15	126.1	129.3
C13	C5	C6	119.4	118.8
C19	C17	C8	121.3	120.3
C17	C19	H19	119.6	119.8
C19	C17	H17	119.4	119.9
C17	C8	C6	119.8	120.4
C17	C8	C11	118.0	119.8
C8	C17	H17	119.4	119.8
C15	C5	C6	114.5	111.9
C5	C15	C12	106.1	114.9
C5	C15	H15	127.0	122.6
C5	C6	S9	110.6	109.7
C5	C6	C8	117.8	119.9
C15	C12	S9	115.4	111.3
C12	C15	H15	126.9	122.5
C15	C12	H12	122.3	124.3
C12	S9	C6	93.4	92.2
S9	C12	H12	122.3	124.4
S9	C6	C8	131.6	130.5
C6	C8	C11	122.2	119.8
C8	C11	C14	107.6	109.5
C8	C11	H11	110.1	109.5
C8	C11	H11A	110.5	109.5
C11	C14	O24	109.7	109.5
C11	C14	C10	108.6	109.5
C14	C11	H11	110.1	109.5
C14	C11	H11A	110.5	109.5
C11	C14	H14	110.8	109.5
O24	C14	C10	112.1	109.5
C14	O24	C28	111.9	114.0
O24	C14	H14	107.2	109.5
C14	C10	O21	118.5	120.0
C14	C10	O18	119.5	120.0
C10	C14	H14	108.4	109.5
O24	C28	H28	109.5	109.5
O24	C28	H28A	109.4	109.5
O24	C28	H28B	109.5	109.5
O21	C10	O18	122.0	120.0
C10	O21	HO21	109.5	117.0
H25	C25	H25A	109.5	109.4
H25	C25	H25B	109.4	109.5
H25A	C25	H25B	109.5	109.5
H20	C20	H20A	110.7	109.5
H23	C23	H23A	108.4	109.5
H11	C11	H11A	108.0	109.4
H28	C28	H28A	109.5	109.4
H28	C28	H28B	109.4	109.5
H28A	C28	H28B	109.5	109.5

Torsion Angles for RO7

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O3	C7	C25	C4	178.1	180.3
C25	C7	O3	C2	180.9	180.0
C25	C7	C4	N1	179.1	179.8
C25	C7	C4	C20	358.1	360.0
H25	C25	C7	H25A	240.0	240.1
H25	C25	C7	H25B	120.0	120.1
H25A	C25	C7	H25B	240.0	240.0
C25	C7	O3	C4	181.5	179.8
O3	C7	C25	H25	319.3	0.1
O3	C7	C25	H25A	79.3	120.0
O3	C7	C25	H25B	199.3	240.0
O3	C7	C4	N1	0.8	359.6
O3	C7	C4	C20	179.8	179.7
C7	O3	C2	C16	181.7	180.0
C7	O3	C2	N1	0.1	360.0
C25	C7	C4	O3	178.3	180.2
C4	C7	C25	H25	141.1	179.8
C4	C7	C25	H25A	261.1	299.7
C4	C7	C25	H25B	21.1	59.7
C4	C7	O3	C2	359.5	0.3
C2	N1	C4	C7	359.3	0.4
N1	C4	C7	C20	181.0	179.9
C7	C4	C20	C23	86.8	90.0
C7	C4	C20	H20	206.8	210.0
C7	C4	C20	H20A	327.4	330.0
C2	O3	C7	C4	359.5	0.3
C16	C2	O3	N1	181.6	180.0
O3	C2	C16	C26	178.5	360.0
O3	C2	C16	C27	358.4	179.7
O3	C2	N1	C4	0.4	359.8
O3	C2	C16	N1	178.4	180.0
C16	C2	N1	C4	179.1	179.7
C26	C16	C2	C27	180.1	180.3
C2	C16	C26	C29	179.9	180.0
C2	C16	C26	H26	359.9	360.0
C2	C16	C27	C30	180.0	179.7
C2	C16	C27	H27	359.9	360.0
C7	C4	N1	C2	359.3	0.4
O3	C2	N1	C16	181.3	180.0
N1	C2	C16	C26	0.1	180.0
N1	C2	C16	C27	180.0	359.7
C2	N1	C4	C20	180.4	180.3
C26	C16	C2	N1	0.1	180.0
C2	C16	C26	C27	179.9	179.7
C26	C16	C27	C30	359.9	359.4
C26	C16	C27	H27	179.9	179.7
C16	C26	C29	C31	0.1	0.0
C29	C26	C16	H26	180.0	180.0
C16	C26	C29	H29	180.2	180.0
C27	C16	C2	N1	180.0	359.7
C2	C16	C27	C26	180.1	180.3
C27	C16	C26	C29	360.0	0.3
C27	C16	C26	H26	180.0	180.3
C31	C30	C27	C16	0.1	0.6
C16	C27	C30	H30	180.1	180.3
C30	C27	C16	H27	180.0	179.7
C29	C26	C16	C27	360.0	0.3
C16	C26	C29	H26	180.0	180.0
C26	C29	C31	C30	359.9	0.0
C31	C29	C26	H29	180.0	180.1
C26	C29	C31	H31	179.9	179.9
C31	C29	C26	H26	180.1	180.0
C26	C29	C31	H29	180.0	179.9
C29	C31	C30	C27	360.0	359.7
C30	C31	C29	H31	180.0	180.1
C29	C31	C30	H30	180.0	180.0
C16	C27	C30	C31	0.1	0.6
C30	C31	C29	H29	179.9	180.1
C29	C31	C30	H31	180.0	179.9
C27	C30	C31	H30	180.0	179.7
C31	C30	C27	H27	180.2	180.3
C16	C27	C30	H27	180.0	180.3
C27	C30	C31	H31	180.0	179.7
C31	C30	C27	H30	180.0	180.3
C7	C4	N1	C20	178.9	180.1
N1	C4	C20	C23	265.5	270.1
N1	C4	C20	H20	25.6	30.2
N1	C4	C20	H20A	146.2	150.2
C7	C4	C20	N1	181.2	179.8
C4	C20	C23	O22	267.3	180.0
C23	C20	C4	H20	240.0	240.0
C23	C20	C4	H20A	119.3	120.0
C4	C20	C23	H23	27.3	300.0
C4	C20	C23	H23A	146.7	60.0
H20	C20	C4	H20A	239.4	240.0
C4	C20	C23	H20	120.0	120.0
C4	C20	C23	H20A	240.6	240.1
C20	C23	O22	C13	168.3	180.0
O22	C23	C20	H23	240.0	240.0
O22	C23	C20	H23A	120.6	120.0
H20	C20	C23	H20A	120.6	120.0
H23	C23	C20	H23A	240.6	240.0
O22	C23	C20	H20	147.3	60.0
O22	C23	C20	H20A	26.6	300.0
C20	C23	O22	H23	120.0	120.0
C20	C23	O22	H23A	239.5	240.0
C23	O22	C13	C19	15.5	360.0
C23	O22	C13	C5	193.6	179.7
H23	C23	O22	H23A	119.5	120.0
C13	O22	C23	H23	48.3	60.0
C13	O22	C23	H23A	288.9	300.0
C19	C13	O22	C5	181.9	180.2
O22	C13	C19	C17	179.5	180.0
O22	C13	C19	H19	359.5	0.0
O22	C13	C5	C15	0.5	360.0
O22	C13	C5	C6	180.6	180.0
O22	C13	C19	C5	178.1	179.8
C19	C13	C5	C15	178.6	179.7
C19	C13	C5	C6	358.7	359.8
C13	C19	C17	C8	359.2	0.0
C17	C19	C13	H19	180.0	180.0
C13	C19	C17	H17	179.2	180.0
O22	C13	C5	C19	181.8	180.2
C5	C13	C19	C17	1.5	0.2
C5	C13	C19	H19	181.5	180.2
C15	C5	C13	C6	179.9	180.0
C13	C5	C15	C12	179.2	180.0
C13	C5	C15	H15	359.2	0.0
C13	C5	C6	S9	181.0	180.0
C13	C5	C6	C8	0.4	360.0
C17	C19	C13	C5	1.5	0.2
C13	C19	C17	H19	180.0	180.0
C19	C17	C8	C6	360.0	359.7
C19	C17	C8	C11	179.4	180.0
C8	C17	C19	H17	180.0	180.0
C8	C17	C19	H19	179.2	180.0
C19	C17	C8	H17	180.0	180.0
C5	C6	C8	C17	0.2	0.3
S9	C6	C8	C17	179.4	180.3
C6	C8	C17	C11	180.5	179.8
C17	C8	C11	C14	275.5	265.0
C17	C8	C11	H11	35.4	25.1
C17	C8	C11	H11A	154.7	145.0
C13	C5	C15	C6	180.1	180.0
C15	C5	C6	S9	1.1	0.0
C15	C5	C6	C8	180.5	180.0
C5	C15	C12	S9	0.3	0.0
C12	C15	C5	H15	180.0	180.0
C5	C15	C12	H12	180.3	180.0
C13	C5	C6	C15	179.9	180.0
C17	C8	C6	C5	0.2	0.3
C6	C5	C15	C12	359.1	360.0
C6	C5	C15	H15	179.1	180.0
C12	S9	C6	C5	359.3	360.0
S9	C6	C5	C8	180.6	180.0
C5	C6	C8	C11	180.8	180.0
C12	C15	C5	C6	359.1	360.0
C5	C15	C12	H15	180.0	180.0
C15	C12	S9	C6	0.3	360.0
S9	C12	C15	H12	180.0	180.0
C5	C6	S9	C12	359.3	360.0
S9	C12	C15	H15	180.3	180.0
C15	C12	S9	H12	180.0	180.0
C12	S9	C6	C8	180.0	180.0
C17	C8	C6	S9	179.4	180.3
C5	C6	S9	C8	179.3	180.0
C6	S9	C12	H12	180.2	180.0
S9	C6	C8	C11	0.0	0.0
C17	C8	C6	C11	179.4	180.2
C6	C8	C17	H17	179.9	179.7
C5	C6	C8	S9	180.7	180.0
C6	C8	C11	C14	94.9	85.2
C6	C8	C11	H11	214.9	205.3
C6	C8	C11	H11A	334.2	325.2
C17	C8	C11	C6	180.6	179.8
C11	C8	C17	H17	359.4	360.0
C8	C11	C14	O24	285.8	295.0
C8	C11	C14	C10	162.9	175.0
C14	C11	C8	H11	240.0	239.9
C14	C11	C8	H11A	120.7	120.0
C8	C11	C14	H14	44.0	55.0
H11	C11	C8	H11A	240.7	240.1
C8	C11	C14	H11	120.0	120.0
C8	C11	C14	H11A	239.3	240.0
O24	C14	C11	C10	122.8	120.0
C11	C14	O24	C28	175.6	150.0
O24	C14	C11	H14	241.8	240.0
C11	C14	C10	O21	274.9	295.0
C11	C14	C10	O18	93.0	115.0
C10	C14	C11	H14	119.0	120.0
H11	C11	C14	H11A	119.2	120.0
C11	C14	O24	C10	239.3	240.0
O24	C14	C11	H11	165.8	175.0
O24	C14	C11	H11A	46.5	55.0
C11	C14	O24	H14	120.4	120.0
O24	C14	C10	O21	153.6	175.0
O24	C14	C10	O18	331.6	355.0
C10	C14	O24	H14	241.1	240.0
C14	O24	C28	H28	32.8	180.0
C14	O24	C28	H28A	152.8	300.0
C14	O24	C28	H28B	272.9	60.0
C11	C14	C10	O24	121.4	120.0
C10	C14	C11	H11	42.9	55.0
C10	C14	C11	H11A	283.7	295.0
C11	C14	C10	H14	239.5	240.0
C10	C14	O24	C28	296.3	270.0
O24	C14	C10	H14	118.1	120.0
O21	C10	C14	O18	182.0	180.0
C14	C10	O21	HO21	178.0	180.0
C28	O24	C14	C10	296.3	270.0
C28	O24	C14	H14	55.2	30.0
H28	C28	O24	H28A	240.0	240.0
H28	C28	O24	H28B	119.9	120.0
H28A	C28	O24	H28B	240.0	240.0
C14	C10	O21	O18	178.0	180.0
O21	C10	C14	H14	35.4	55.0
C14	C10	O18	O21	182.0	180.0
O18	C10	C14	H14	213.5	235.0
O18	C10	O21	HO21	360.0	0.0
H25	C25	C7	O3	319.3	0.1
H25	C25	C7	C4	141.1	179.8
C7	C25	H25	H25A	120.0	120.0
C7	C25	H25	H25B	240.0	239.9
H25A	C25	H25	H25B	120.0	120.0
H25A	C25	C7	O3	79.3	120.0
H25A	C25	C7	C4	261.1	299.7
C7	C25	H25A	H25	239.9	240.1
C7	C25	H25A	H25B	120.0	120.0
H25	C25	H25A	H25B	240.1	240.0
H25B	C25	C7	O3	199.3	240.0
H25B	C25	C7	C4	21.1	59.7
C7	C25	H25B	H25	120.0	120.0
C7	C25	H25B	H25A	240.0	240.0
H25	C25	H25B	H25A	120.0	120.0
H26	C26	C16	C27	180.0	180.3
C16	C26	H26	C29	180.0	180.0
H26	C26	C29	C31	180.1	180.0
H26	C26	C29	H29	0.1	360.0
C26	C29	H29	C31	180.0	180.1
H29	C29	C26	H26	0.1	360.0
H29	C29	C31	C30	179.9	180.1
H29	C29	C31	H31	359.9	0.0
C29	C31	H31	C30	180.0	180.1
H31	C31	C29	H29	359.9	0.0
H31	C31	C30	C27	180.0	179.7
H31	C31	C30	H30	0.0	0.0
C31	C30	H30	C27	180.0	179.7
H30	C30	C31	H31	0.0	0.0
H30	C30	C27	H27	0.1	0.0
C16	C27	H27	C30	180.0	179.7
H27	C27	C30	H30	0.1	0.0
C4	C20	H20	C23	238.7	240.0
C4	C20	H20	H20A	119.4	120.0
H20	C20	C23	O22	147.3	60.0
C23	C20	H20	H20A	240.7	240.0
H20	C20	C23	H23	267.3	180.0
H20	C20	C23	H23A	26.7	300.0
C4	C20	H20A	C23	120.8	119.9
C4	C20	H20A	H20	240.4	240.0
H20A	C20	C23	O22	26.6	300.0
C23	C20	H20A	H20	119.6	120.0
H20A	C20	C23	H23	146.7	60.0
H20A	C20	C23	H23A	266.1	180.0
C20	C23	H23	O22	241.1	240.0
H23	C23	C20	H20	267.3	180.0
H23	C23	C20	H20A	146.7	60.0
C20	C23	H23	H23A	120.5	120.0
H23	C23	O22	C13	48.3	60.0
O22	C23	H23	H23A	239.4	240.0
C20	C23	H23A	O22	119.3	120.0
H23A	C23	C20	H20	26.7	300.0
H23A	C23	C20	H20A	266.1	180.0
C20	C23	H23A	H23	239.7	240.0
H23A	C23	O22	C13	288.9	300.0
O22	C23	H23A	H23	120.4	120.0
H19	C19	C13	C5	181.5	180.2
C13	C19	H19	C17	180.0	180.0
H19	C19	C17	C8	179.2	180.0
H19	C19	C17	H17	359.2	0.0
C19	C17	H17	C8	180.0	180.0
H17	C17	C19	H19	359.2	0.0
H17	C17	C8	C6	179.9	179.7
H17	C17	C8	C11	359.4	360.0
H15	C15	C5	C6	179.1	180.0
C5	C15	H15	C12	180.0	180.0
H15	C15	C12	S9	180.3	180.0
H15	C15	C12	H12	0.3	0.0
C15	C12	H12	S9	180.0	180.0
H12	C12	C15	H15	0.3	0.0
H12	C12	S9	C6	180.2	180.0
C8	C11	H11	C14	241.5	240.0
C8	C11	H11	H11A	120.8	119.9
H11	C11	C14	O24	165.8	175.0
H11	C11	C14	C10	42.9	55.0
C14	C11	H11	H11A	239.3	240.0
H11	C11	C14	H14	283.9	295.0
C8	C11	H11A	C14	119.0	120.0
C8	C11	H11A	H11	239.5	240.1
H11A	C11	C14	O24	46.5	55.0
H11A	C11	C14	C10	283.7	295.0
C14	C11	H11A	H11	120.5	120.0
H11A	C11	C14	H14	164.7	175.0
C11	C14	H14	O24	240.3	240.0
C11	C14	H14	C10	119.1	120.0
H14	C14	C11	H11	283.9	295.0
H14	C14	C11	H11A	164.7	175.0
O24	C14	H14	C10	238.8	240.0
H14	C14	O24	C28	55.2	30.0
H14	C14	C10	O21	35.4	55.0
H14	C14	C10	O18	213.5	235.0
O24	C28	H28	H28A	120.0	120.0
O24	C28	H28	H28B	240.0	240.0
H28A	C28	H28	H28B	120.0	120.0
O24	C28	H28A	H28	240.0	240.0
O24	C28	H28A	H28B	120.0	120.0
H28	C28	H28A	H28B	240.0	240.1
O24	C28	H28B	H28	120.0	120.0
O24	C28	H28B	H28A	240.0	239.9
H28	C28	H28B	H28A	120.0	119.9
HO21	O21	C10	O18	360.0	0.0