PDB Chemical Component RM4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RM4
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C1 |
1.530 |
1.531 |
C1 |
O5 |
1.434 |
1.429 |
C1 |
O1 |
1.410 |
1.429 |
C1 |
H1 |
1.100 |
1.091 |
C3 |
C2 |
1.538 |
1.531 |
C2 |
O2 |
1.438 |
1.429 |
C2 |
H2 |
1.100 |
1.089 |
O3 |
C3 |
1.439 |
1.429 |
C3 |
C4 |
1.544 |
1.532 |
C3 |
H3 |
1.100 |
1.090 |
O4 |
C4 |
1.449 |
1.429 |
C4 |
C5 |
1.522 |
1.530 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
C6 |
1.525 |
1.531 |
C5 |
O5 |
1.427 |
1.429 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.089 |
C6 |
H63 |
1.100 |
1.090 |
O1 |
HO1 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.967 |
O3 |
HO3 |
0.950 |
0.966 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for RM4
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O5 |
112.5 |
109.4 |
C2 |
C1 |
O1 |
108.1 |
109.5 |
C2 |
C1 |
H1 |
109.2 |
109.5 |
O1 |
C1 |
O5 |
111.8 |
109.5 |
O5 |
C1 |
H1 |
105.3 |
109.5 |
C1 |
O5 |
C5 |
112.2 |
114.1 |
O1 |
C1 |
H1 |
109.9 |
109.5 |
C1 |
O1 |
HO1 |
109.5 |
114.0 |
C3 |
C2 |
O2 |
116.4 |
109.5 |
C3 |
C2 |
H2 |
106.5 |
109.6 |
O2 |
C2 |
H2 |
103.1 |
109.5 |
C2 |
O2 |
HO2 |
109.5 |
114.0 |
O3 |
C3 |
H3 |
107.6 |
109.6 |
C4 |
C3 |
H3 |
107.0 |
109.5 |
C3 |
C4 |
C5 |
111.5 |
109.2 |
C3 |
C4 |
H4 |
106.4 |
109.5 |
O4 |
C4 |
H4 |
108.6 |
109.5 |
C5 |
C4 |
H4 |
109.0 |
109.5 |
C4 |
C5 |
C6 |
109.2 |
109.5 |
C4 |
C5 |
O5 |
111.2 |
109.4 |
C4 |
C5 |
H5 |
107.9 |
109.5 |
C6 |
C5 |
O5 |
107.6 |
109.4 |
C6 |
C5 |
H5 |
111.5 |
109.5 |
C5 |
C6 |
H61 |
109.5 |
109.4 |
C5 |
C6 |
H62 |
109.5 |
109.5 |
C5 |
C6 |
H63 |
109.5 |
109.5 |
O5 |
C5 |
H5 |
109.5 |
109.5 |
H61 |
C6 |
H62 |
109.4 |
109.5 |
H61 |
C6 |
H63 |
109.5 |
109.4 |
H62 |
C6 |
H63 |
109.5 |
109.5 |
Torsion Angles for RM4
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
236.1 |
240.0 |
O5 |
C1 |
C2 |
H1 |
243.5 |
240.0 |
C2 |
C1 |
O5 |
C5 |
63.7 |
61.2 |
O1 |
C1 |
C2 |
H1 |
119.6 |
120.0 |
C2 |
C1 |
O1 |
HO1 |
89.9 |
180.0 |
C2 |
C1 |
O5 |
O1 |
238.2 |
240.0 |
C2 |
C1 |
O5 |
H1 |
118.8 |
120.0 |
O1 |
C1 |
O5 |
H1 |
240.6 |
240.0 |
O5 |
C1 |
O1 |
HO1 |
325.6 |
60.0 |
C4 |
C5 |
O5 |
C1 |
300.7 |
298.8 |
C6 |
C5 |
O5 |
C1 |
181.1 |
178.8 |
C1 |
O5 |
C5 |
H5 |
59.8 |
58.8 |
C2 |
C1 |
O1 |
O5 |
124.3 |
120.0 |
C2 |
C1 |
O1 |
H1 |
240.9 |
240.0 |
O5 |
C1 |
O1 |
H1 |
116.6 |
120.0 |
O1 |
C1 |
O5 |
C5 |
185.6 |
181.2 |
C2 |
C1 |
H1 |
O5 |
239.0 |
240.1 |
C2 |
C1 |
H1 |
O1 |
118.5 |
120.0 |
O1 |
C1 |
H1 |
O5 |
120.6 |
120.0 |
H1 |
C1 |
O5 |
C5 |
304.9 |
301.2 |
H1 |
C1 |
O1 |
HO1 |
209.0 |
300.0 |
C3 |
C2 |
C1 |
O5 |
302.9 |
302.4 |
C3 |
C2 |
C1 |
O1 |
179.0 |
182.4 |
C3 |
C2 |
C1 |
H1 |
59.4 |
62.4 |
O2 |
C2 |
C3 |
H2 |
114.3 |
120.2 |
C3 |
C2 |
O2 |
HO2 |
121.5 |
179.6 |
O2 |
C2 |
C1 |
O5 |
70.9 |
62.3 |
O2 |
C2 |
C1 |
O1 |
307.0 |
302.3 |
O2 |
C2 |
C1 |
H1 |
187.5 |
182.3 |
C3 |
C2 |
O2 |
H2 |
243.8 |
239.8 |
H2 |
C2 |
C1 |
O5 |
185.8 |
182.4 |
H2 |
C2 |
C1 |
O1 |
61.9 |
62.4 |
H2 |
C2 |
C1 |
H1 |
302.4 |
302.4 |
C3 |
C2 |
H2 |
O2 |
123.1 |
120.2 |
H2 |
C2 |
O2 |
HO2 |
237.7 |
299.9 |
O3 |
C3 |
C2 |
H2 |
297.5 |
296.8 |
C4 |
C3 |
O3 |
H3 |
243.1 |
239.8 |
O3 |
C3 |
C4 |
H4 |
303.0 |
303.0 |
C4 |
C3 |
C2 |
O2 |
285.4 |
297.1 |
C4 |
C3 |
C2 |
H2 |
171.1 |
176.9 |
O3 |
C3 |
C4 |
H3 |
117.2 |
120.2 |
O4 |
C4 |
C3 |
H4 |
118.4 |
120.2 |
C5 |
C4 |
C3 |
H4 |
241.3 |
240.1 |
C3 |
C4 |
C5 |
C6 |
170.2 |
177.5 |
C3 |
C4 |
C5 |
O5 |
51.6 |
57.6 |
C3 |
C4 |
C5 |
H5 |
291.5 |
297.6 |
H3 |
C3 |
C2 |
O2 |
168.8 |
177.2 |
H3 |
C3 |
C2 |
H2 |
54.5 |
57.0 |
H3 |
C3 |
C4 |
C5 |
67.1 |
62.9 |
H3 |
C3 |
C4 |
H4 |
185.8 |
182.8 |
O4 |
C4 |
C3 |
H3 |
304.2 |
303.0 |
C3 |
C4 |
O4 |
H4 |
242.9 |
239.9 |
C5 |
C4 |
O4 |
H4 |
118.8 |
120.1 |
O4 |
C4 |
C5 |
O5 |
175.9 |
177.6 |
O4 |
C4 |
C5 |
H5 |
55.8 |
57.5 |
C1 |
O5 |
C5 |
C4 |
300.7 |
298.8 |
C5 |
C4 |
C3 |
H3 |
67.1 |
62.9 |
C3 |
C4 |
C5 |
H4 |
117.2 |
119.9 |
O4 |
C4 |
C5 |
H4 |
241.4 |
239.8 |
C6 |
C5 |
C4 |
O5 |
118.6 |
119.9 |
C6 |
C5 |
C4 |
H5 |
238.7 |
240.0 |
C4 |
C5 |
C6 |
H61 |
74.2 |
60.0 |
C4 |
C5 |
C6 |
H62 |
194.2 |
180.0 |
C4 |
C5 |
C6 |
H63 |
314.2 |
300.0 |
O5 |
C5 |
C4 |
H5 |
120.1 |
120.0 |
H4 |
C4 |
C3 |
H3 |
185.8 |
182.8 |
C3 |
C4 |
H4 |
C5 |
239.6 |
240.3 |
H4 |
C4 |
C5 |
C6 |
53.1 |
57.7 |
H4 |
C4 |
C5 |
O5 |
294.5 |
297.7 |
H4 |
C4 |
C5 |
H5 |
174.4 |
177.7 |
C1 |
O5 |
C5 |
C6 |
181.1 |
178.8 |
C6 |
C5 |
C4 |
H4 |
53.1 |
57.7 |
C4 |
C5 |
C6 |
O5 |
239.2 |
240.1 |
C4 |
C5 |
C6 |
H5 |
119.1 |
120.0 |
O5 |
C5 |
C6 |
H5 |
239.9 |
240.0 |
H61 |
C6 |
C5 |
H62 |
240.0 |
240.0 |
H61 |
C6 |
C5 |
H63 |
120.0 |
120.0 |
H62 |
C6 |
C5 |
H63 |
240.0 |
240.0 |
C5 |
O5 |
C1 |
H1 |
304.9 |
301.2 |
O5 |
C5 |
C4 |
H4 |
294.5 |
297.7 |
C4 |
C5 |
O5 |
C6 |
119.6 |
120.0 |
C4 |
C5 |
O5 |
H5 |
240.9 |
240.0 |
C6 |
C5 |
O5 |
H5 |
121.3 |
120.0 |
O5 |
C5 |
C6 |
H61 |
195.1 |
179.9 |
O5 |
C5 |
C6 |
H62 |
315.0 |
299.9 |
O5 |
C5 |
C6 |
H63 |
75.0 |
60.0 |
H5 |
C5 |
C4 |
H4 |
174.4 |
177.7 |
C4 |
C5 |
H5 |
C6 |
240.1 |
240.0 |
C4 |
C5 |
H5 |
O5 |
121.2 |
120.0 |
C6 |
C5 |
H5 |
O5 |
241.0 |
240.0 |
H5 |
C5 |
C6 |
H61 |
315.1 |
300.0 |
H5 |
C5 |
C6 |
H62 |
75.1 |
60.0 |
H5 |
C5 |
C6 |
H63 |
195.1 |
180.0 |
H61 |
C6 |
C5 |
O5 |
195.1 |
179.9 |
H61 |
C6 |
C5 |
H5 |
315.1 |
300.0 |
C5 |
C6 |
H61 |
H62 |
120.0 |
120.0 |
C5 |
C6 |
H61 |
H63 |
240.0 |
240.0 |
H62 |
C6 |
H61 |
H63 |
120.0 |
120.0 |
H62 |
C6 |
C5 |
O5 |
315.0 |
299.9 |
H62 |
C6 |
C5 |
H5 |
75.1 |
60.0 |
C5 |
C6 |
H62 |
H61 |
240.0 |
240.0 |
C5 |
C6 |
H62 |
H63 |
120.0 |
120.0 |
H61 |
C6 |
H62 |
H63 |
240.0 |
240.0 |
H63 |
C6 |
C5 |
O5 |
75.0 |
60.0 |
H63 |
C6 |
C5 |
H5 |
195.1 |
180.0 |
C5 |
C6 |
H63 |
H61 |
120.1 |
120.0 |
C5 |
C6 |
H63 |
H62 |
240.0 |
240.0 |
H61 |
C6 |
H63 |
H62 |
120.0 |
120.0 |
HO1 |
O1 |
C1 |
O5 |
325.6 |
60.0 |
HO1 |
O1 |
C1 |
H1 |
209.0 |
300.0 |
HO2 |
O2 |
C2 |
H2 |
237.7 |
299.9 |
HO3 |
O3 |
C3 |
H3 |
205.9 |
299.8 |
HO4 |
O4 |
C4 |
H4 |
153.7 |
300.2 |