PDB Chemical Component RM4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RM4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.530 1.531
C1 O5 1.434 1.429
C1 O1 1.410 1.429
C1 H1 1.100 1.091
C3 C2 1.538 1.531
C2 O2 1.438 1.429
C2 H2 1.100 1.089
O3 C3 1.439 1.429
C3 C4 1.544 1.532
C3 H3 1.100 1.090
O4 C4 1.449 1.429
C4 C5 1.522 1.530
C4 H4 1.100 1.090
C5 C6 1.525 1.531
C5 O5 1.427 1.429
C5 H5 1.100 1.090
C6 H61 1.100 1.090
C6 H62 1.100 1.089
C6 H63 1.100 1.090
O1 HO1 0.950 0.967
O2 HO2 0.950 0.967
O3 HO3 0.950 0.966
O4 HO4 0.950 0.967

Bond Angles for RM4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O5 112.5 109.4
C2 C1 O1 108.1 109.5
C2 C1 H1 109.2 109.5
O1 C1 O5 111.8 109.5
O5 C1 H1 105.3 109.5
C1 O5 C5 112.2 114.1
O1 C1 H1 109.9 109.5
C1 O1 HO1 109.5 114.0
C3 C2 O2 116.4 109.5
C3 C2 H2 106.5 109.6
O2 C2 H2 103.1 109.5
C2 O2 HO2 109.5 114.0
O3 C3 H3 107.6 109.6
C4 C3 H3 107.0 109.5
C3 C4 C5 111.5 109.2
C3 C4 H4 106.4 109.5
O4 C4 H4 108.6 109.5
C5 C4 H4 109.0 109.5
C4 C5 C6 109.2 109.5
C4 C5 O5 111.2 109.4
C4 C5 H5 107.9 109.5
C6 C5 O5 107.6 109.4
C6 C5 H5 111.5 109.5
C5 C6 H61 109.5 109.4
C5 C6 H62 109.5 109.5
C5 C6 H63 109.5 109.5
O5 C5 H5 109.5 109.5
H61 C6 H62 109.4 109.5
H61 C6 H63 109.5 109.4
H62 C6 H63 109.5 109.5

Torsion Angles for RM4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 236.1 240.0
O5 C1 C2 H1 243.5 240.0
C2 C1 O5 C5 63.7 61.2
O1 C1 C2 H1 119.6 120.0
C2 C1 O1 HO1 89.9 180.0
C2 C1 O5 O1 238.2 240.0
C2 C1 O5 H1 118.8 120.0
O1 C1 O5 H1 240.6 240.0
O5 C1 O1 HO1 325.6 60.0
C4 C5 O5 C1 300.7 298.8
C6 C5 O5 C1 181.1 178.8
C1 O5 C5 H5 59.8 58.8
C2 C1 O1 O5 124.3 120.0
C2 C1 O1 H1 240.9 240.0
O5 C1 O1 H1 116.6 120.0
O1 C1 O5 C5 185.6 181.2
C2 C1 H1 O5 239.0 240.1
C2 C1 H1 O1 118.5 120.0
O1 C1 H1 O5 120.6 120.0
H1 C1 O5 C5 304.9 301.2
H1 C1 O1 HO1 209.0 300.0
C3 C2 C1 O5 302.9 302.4
C3 C2 C1 O1 179.0 182.4
C3 C2 C1 H1 59.4 62.4
O2 C2 C3 H2 114.3 120.2
C3 C2 O2 HO2 121.5 179.6
O2 C2 C1 O5 70.9 62.3
O2 C2 C1 O1 307.0 302.3
O2 C2 C1 H1 187.5 182.3
C3 C2 O2 H2 243.8 239.8
H2 C2 C1 O5 185.8 182.4
H2 C2 C1 O1 61.9 62.4
H2 C2 C1 H1 302.4 302.4
C3 C2 H2 O2 123.1 120.2
H2 C2 O2 HO2 237.7 299.9
O3 C3 C2 H2 297.5 296.8
C4 C3 O3 H3 243.1 239.8
O3 C3 C4 H4 303.0 303.0
C4 C3 C2 O2 285.4 297.1
C4 C3 C2 H2 171.1 176.9
O3 C3 C4 H3 117.2 120.2
O4 C4 C3 H4 118.4 120.2
C5 C4 C3 H4 241.3 240.1
C3 C4 C5 C6 170.2 177.5
C3 C4 C5 O5 51.6 57.6
C3 C4 C5 H5 291.5 297.6
H3 C3 C2 O2 168.8 177.2
H3 C3 C2 H2 54.5 57.0
H3 C3 C4 C5 67.1 62.9
H3 C3 C4 H4 185.8 182.8
O4 C4 C3 H3 304.2 303.0
C3 C4 O4 H4 242.9 239.9
C5 C4 O4 H4 118.8 120.1
O4 C4 C5 O5 175.9 177.6
O4 C4 C5 H5 55.8 57.5
C1 O5 C5 C4 300.7 298.8
C5 C4 C3 H3 67.1 62.9
C3 C4 C5 H4 117.2 119.9
O4 C4 C5 H4 241.4 239.8
C6 C5 C4 O5 118.6 119.9
C6 C5 C4 H5 238.7 240.0
C4 C5 C6 H61 74.2 60.0
C4 C5 C6 H62 194.2 180.0
C4 C5 C6 H63 314.2 300.0
O5 C5 C4 H5 120.1 120.0
H4 C4 C3 H3 185.8 182.8
C3 C4 H4 C5 239.6 240.3
H4 C4 C5 C6 53.1 57.7
H4 C4 C5 O5 294.5 297.7
H4 C4 C5 H5 174.4 177.7
C1 O5 C5 C6 181.1 178.8
C6 C5 C4 H4 53.1 57.7
C4 C5 C6 O5 239.2 240.1
C4 C5 C6 H5 119.1 120.0
O5 C5 C6 H5 239.9 240.0
H61 C6 C5 H62 240.0 240.0
H61 C6 C5 H63 120.0 120.0
H62 C6 C5 H63 240.0 240.0
C5 O5 C1 H1 304.9 301.2
O5 C5 C4 H4 294.5 297.7
C4 C5 O5 C6 119.6 120.0
C4 C5 O5 H5 240.9 240.0
C6 C5 O5 H5 121.3 120.0
O5 C5 C6 H61 195.1 179.9
O5 C5 C6 H62 315.0 299.9
O5 C5 C6 H63 75.0 60.0
H5 C5 C4 H4 174.4 177.7
C4 C5 H5 C6 240.1 240.0
C4 C5 H5 O5 121.2 120.0
C6 C5 H5 O5 241.0 240.0
H5 C5 C6 H61 315.1 300.0
H5 C5 C6 H62 75.1 60.0
H5 C5 C6 H63 195.1 180.0
H61 C6 C5 O5 195.1 179.9
H61 C6 C5 H5 315.1 300.0
C5 C6 H61 H62 120.0 120.0
C5 C6 H61 H63 240.0 240.0
H62 C6 H61 H63 120.0 120.0
H62 C6 C5 O5 315.0 299.9
H62 C6 C5 H5 75.1 60.0
C5 C6 H62 H61 240.0 240.0
C5 C6 H62 H63 120.0 120.0
H61 C6 H62 H63 240.0 240.0
H63 C6 C5 O5 75.0 60.0
H63 C6 C5 H5 195.1 180.0
C5 C6 H63 H61 120.1 120.0
C5 C6 H63 H62 240.0 240.0
H61 C6 H63 H62 120.0 120.0
HO1 O1 C1 O5 325.6 60.0
HO1 O1 C1 H1 209.0 300.0
HO2 O2 C2 H2 237.7 299.9
HO3 O3 C3 H3 205.9 299.8
HO4 O4 C4 H4 153.7 300.2