PDB Chemical Component RL3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RL3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O09 |
C03 |
1.374 |
1.357 |
| N14 |
N15 |
1.309 |
1.286 |
| N14 |
C13 |
1.389 |
1.324 |
| N15 |
C11 |
1.319 |
1.318 |
| C03 |
C02 |
1.430 |
1.384 |
| C03 |
C04 |
1.364 |
1.404 |
| C13 |
C19 |
1.403 |
1.408 |
| C13 |
N12 |
1.322 |
1.374 |
| C19 |
C18 |
1.416 |
1.361 |
| C11 |
N12 |
1.416 |
1.368 |
| C11 |
C04 |
1.487 |
1.478 |
| C02 |
C01 |
1.411 |
1.385 |
| N12 |
C16 |
1.354 |
1.364 |
| C04 |
C05 |
1.403 |
1.390 |
| C18 |
C17 |
1.368 |
1.405 |
| C16 |
C17 |
1.389 |
1.351 |
| C17 |
BR1 |
1.894 |
1.891 |
| C01 |
O10 |
1.409 |
1.357 |
| C01 |
C06 |
1.366 |
1.404 |
| C05 |
C06 |
1.413 |
1.396 |
| C06 |
C07 |
1.530 |
1.473 |
| C24 |
C25 |
1.525 |
1.532 |
| C24 |
N20 |
1.408 |
1.471 |
| C25 |
N21 |
1.461 |
1.469 |
| C07 |
N20 |
1.437 |
1.348 |
| C07 |
O08 |
1.207 |
1.216 |
| N20 |
C27 |
1.434 |
1.471 |
| N21 |
C22 |
1.429 |
1.468 |
| N21 |
C26 |
1.437 |
1.465 |
| C27 |
C26 |
1.517 |
1.532 |
| C02 |
H1 |
1.080 |
1.080 |
| C05 |
H2 |
1.080 |
1.080 |
| O09 |
H3 |
0.950 |
0.967 |
| O10 |
H4 |
0.950 |
0.967 |
| C16 |
H5 |
1.080 |
1.080 |
| C18 |
H6 |
1.080 |
1.080 |
| C19 |
H7 |
1.079 |
1.080 |
| C22 |
H9 |
1.100 |
1.091 |
| C22 |
H10 |
1.100 |
1.090 |
| C22 |
H11 |
1.100 |
1.090 |
| C24 |
H12 |
1.100 |
1.089 |
| C24 |
H13 |
1.100 |
1.091 |
| C25 |
H14 |
1.100 |
1.089 |
| C25 |
H15 |
1.100 |
1.091 |
| C26 |
H16 |
1.100 |
1.090 |
| C26 |
H17 |
1.100 |
1.090 |
| C27 |
H18 |
1.100 |
1.090 |
| C27 |
H19 |
1.100 |
1.090 |
Bond Angles for RL3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N14 |
C13 |
C19 |
131.5 |
133.4 |
| C03 |
C02 |
H1 |
120.1 |
119.9 |
| C03 |
C04 |
C05 |
120.0 |
119.9 |
| C13 |
C19 |
C18 |
119.3 |
119.2 |
| C13 |
C19 |
H7 |
120.4 |
120.4 |
| C13 |
N12 |
C16 |
122.3 |
120.5 |
| C19 |
C18 |
H6 |
121.9 |
120.1 |
| C11 |
N12 |
C16 |
130.9 |
133.7 |
| C02 |
C01 |
O10 |
120.9 |
120.0 |
| C02 |
C01 |
C06 |
120.3 |
120.1 |
| N12 |
C16 |
C17 |
117.6 |
120.5 |
| N12 |
C16 |
H5 |
121.2 |
119.7 |
| C04 |
C05 |
C06 |
120.9 |
119.8 |
| C04 |
C05 |
H2 |
119.5 |
120.1 |
| C18 |
C17 |
BR1 |
119.5 |
119.8 |
| C16 |
C17 |
BR1 |
116.8 |
119.8 |
| C17 |
C16 |
H5 |
121.2 |
119.8 |
| C06 |
C01 |
O10 |
118.8 |
119.9 |
| C01 |
O10 |
H4 |
109.5 |
114.0 |
| C01 |
C06 |
C05 |
119.4 |
119.8 |
| C01 |
C06 |
C07 |
121.5 |
120.1 |
| C05 |
C06 |
C07 |
119.1 |
120.1 |
| C06 |
C05 |
H2 |
119.5 |
120.1 |
| C06 |
C07 |
N20 |
119.2 |
120.0 |
| C06 |
C07 |
O08 |
120.6 |
120.0 |
| C25 |
C24 |
H12 |
107.6 |
109.7 |
| C25 |
C24 |
H13 |
107.6 |
109.6 |
| C24 |
C25 |
H14 |
107.2 |
109.5 |
| C24 |
C25 |
H15 |
107.2 |
109.5 |
| C24 |
N20 |
C27 |
114.6 |
118.2 |
| C25 |
N21 |
C26 |
117.3 |
111.1 |
| O08 |
C07 |
N20 |
120.3 |
120.0 |
| C07 |
N20 |
C27 |
123.8 |
120.9 |
| N20 |
C27 |
C26 |
112.1 |
108.5 |
| N20 |
C27 |
H18 |
108.8 |
109.6 |
| N20 |
C27 |
H19 |
108.8 |
109.6 |
| C22 |
N21 |
C26 |
122.1 |
111.1 |
| N21 |
C22 |
H9 |
109.5 |
109.4 |
| N21 |
C22 |
H10 |
109.5 |
109.5 |
| N21 |
C22 |
H11 |
109.5 |
109.5 |
| N21 |
C26 |
H16 |
108.1 |
109.5 |
| N21 |
C26 |
H17 |
108.1 |
109.4 |
| C27 |
C26 |
H16 |
108.1 |
109.5 |
| C27 |
C26 |
H17 |
108.1 |
109.5 |
| H9 |
C22 |
H10 |
109.4 |
109.5 |
| H9 |
C22 |
H11 |
109.5 |
109.5 |
| H10 |
C22 |
H11 |
109.5 |
109.5 |
| H12 |
C24 |
H13 |
109.5 |
109.8 |
| H14 |
C25 |
H15 |
109.4 |
109.5 |
| H16 |
C26 |
H17 |
109.5 |
109.4 |
| H18 |
C27 |
H19 |
109.5 |
109.8 |
Torsion Angles for RL3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O09 |
C03 |
C02 |
H1 |
0.0 |
0.1 |
| N15 |
N14 |
C13 |
C19 |
179.1 |
179.8 |
| N14 |
C13 |
C19 |
C18 |
180.6 |
179.8 |
| N14 |
C13 |
C19 |
H7 |
0.6 |
359.9 |
| N14 |
C13 |
N12 |
C16 |
179.2 |
180.0 |
| N15 |
C11 |
N12 |
C16 |
181.7 |
180.2 |
| C03 |
C02 |
C01 |
O10 |
180.0 |
180.0 |
| C03 |
C02 |
C01 |
C06 |
1.0 |
0.3 |
| C04 |
C03 |
C02 |
H1 |
178.6 |
180.0 |
| C03 |
C04 |
C05 |
C06 |
359.2 |
359.7 |
| C03 |
C04 |
C05 |
H2 |
179.2 |
179.9 |
| C19 |
C13 |
N12 |
C16 |
359.9 |
360.0 |
| C13 |
C19 |
C18 |
H6 |
180.0 |
180.1 |
| C11 |
N12 |
C13 |
C16 |
179.4 |
180.0 |
| C13 |
N12 |
C16 |
C17 |
0.7 |
0.1 |
| C13 |
N12 |
C16 |
H5 |
180.7 |
180.0 |
| C13 |
C19 |
C18 |
H7 |
180.0 |
180.1 |
| C19 |
C18 |
C17 |
BR1 |
179.2 |
179.9 |
| C13 |
N12 |
C11 |
C16 |
180.7 |
180.0 |
| C11 |
N12 |
C16 |
C17 |
181.4 |
180.0 |
| C11 |
N12 |
C16 |
H5 |
1.4 |
360.0 |
| C11 |
C04 |
C05 |
H2 |
3.1 |
0.0 |
| C06 |
C01 |
C02 |
O10 |
180.9 |
180.3 |
| C02 |
C01 |
O10 |
H4 |
180.0 |
270.3 |
| C02 |
C01 |
C06 |
C05 |
359.6 |
359.5 |
| C02 |
C01 |
C06 |
C07 |
180.8 |
179.7 |
| N12 |
C16 |
C17 |
BR1 |
180.5 |
179.9 |
| C17 |
C16 |
N12 |
H5 |
180.0 |
180.1 |
| C01 |
C06 |
C05 |
C04 |
0.3 |
0.5 |
| C04 |
C05 |
C06 |
C07 |
179.2 |
180.3 |
| C06 |
C05 |
C04 |
H2 |
180.0 |
179.8 |
| C13 |
C19 |
C18 |
C17 |
360.0 |
0.2 |
| C16 |
C17 |
C18 |
BR1 |
181.5 |
179.9 |
| C18 |
C17 |
C16 |
H5 |
179.0 |
180.1 |
| N12 |
C16 |
C17 |
H5 |
180.0 |
179.9 |
| C18 |
C17 |
C16 |
BR1 |
178.5 |
180.1 |
| BR1 |
C17 |
C16 |
H5 |
0.5 |
360.0 |
| C02 |
C01 |
O10 |
C06 |
180.9 |
180.3 |
| O10 |
C01 |
C06 |
C05 |
180.5 |
179.8 |
| O10 |
C01 |
C06 |
C07 |
1.7 |
360.0 |
| C02 |
C01 |
C06 |
O10 |
179.1 |
179.7 |
| C04 |
C05 |
C06 |
C01 |
0.3 |
0.5 |
| C06 |
C01 |
O10 |
H4 |
359.1 |
90.0 |
| C05 |
C06 |
C01 |
C07 |
178.8 |
179.8 |
| C01 |
C06 |
C05 |
H2 |
180.3 |
180.3 |
| C01 |
C06 |
C07 |
N20 |
118.4 |
232.6 |
| C01 |
C06 |
C07 |
O08 |
298.0 |
52.6 |
| C04 |
C05 |
C06 |
H2 |
180.0 |
180.2 |
| C05 |
C06 |
C01 |
O10 |
180.5 |
179.8 |
| C01 |
C06 |
C05 |
C07 |
181.1 |
180.2 |
| C05 |
C06 |
C07 |
N20 |
299.6 |
52.8 |
| C05 |
C06 |
C07 |
O08 |
119.1 |
232.8 |
| C07 |
C06 |
C01 |
O10 |
1.7 |
360.0 |
| C01 |
C06 |
C07 |
C05 |
178.8 |
179.8 |
| C07 |
C06 |
C05 |
H2 |
359.2 |
0.0 |
| O08 |
C07 |
C06 |
N20 |
179.5 |
180.0 |
| C06 |
C07 |
N20 |
C27 |
179.5 |
176.0 |
| C25 |
C24 |
N20 |
C27 |
320.2 |
309.1 |
| C24 |
C25 |
N21 |
C26 |
343.9 |
296.6 |
| H12 |
C24 |
C25 |
H13 |
242.1 |
120.6 |
| H14 |
C25 |
C24 |
H15 |
242.6 |
120.1 |
| C07 |
N20 |
C24 |
C27 |
180.1 |
179.7 |
| C24 |
N20 |
C27 |
C26 |
55.1 |
50.9 |
| C24 |
N20 |
C27 |
H18 |
175.5 |
170.6 |
| C24 |
N20 |
C27 |
H19 |
294.7 |
291.2 |
| C22 |
N21 |
C25 |
C26 |
210.5 |
236.0 |
| C25 |
N21 |
C22 |
H9 |
180.0 |
184.0 |
| C25 |
N21 |
C22 |
H10 |
300.0 |
304.0 |
| C25 |
N21 |
C22 |
H11 |
60.0 |
64.0 |
| C25 |
N21 |
C26 |
H16 |
152.1 |
183.4 |
| C25 |
N21 |
C26 |
H17 |
270.6 |
303.3 |
| C06 |
C07 |
N20 |
O08 |
179.5 |
180.0 |
| C24 |
N20 |
C07 |
C27 |
179.8 |
180.3 |
| C07 |
N20 |
C27 |
C26 |
234.9 |
231.2 |
| C07 |
N20 |
C27 |
H18 |
355.3 |
350.9 |
| C07 |
N20 |
C27 |
H19 |
114.5 |
111.5 |
| C06 |
C07 |
O08 |
N20 |
180.5 |
180.0 |
| O08 |
C07 |
N20 |
C27 |
359.9 |
356.0 |
| N20 |
C27 |
C26 |
H16 |
188.4 |
186.1 |
| N20 |
C27 |
C26 |
H17 |
70.0 |
66.1 |
| H18 |
C27 |
N20 |
H19 |
240.8 |
239.4 |
| C25 |
N21 |
C22 |
C26 |
147.9 |
124.0 |
| C22 |
N21 |
C26 |
H16 |
298.6 |
307.3 |
| C22 |
N21 |
C26 |
H17 |
57.0 |
67.2 |
| H9 |
C22 |
N21 |
H10 |
240.0 |
240.0 |
| H9 |
C22 |
N21 |
H11 |
120.0 |
119.9 |
| H10 |
C22 |
N21 |
H11 |
240.0 |
240.0 |
| N20 |
C27 |
C26 |
N21 |
309.2 |
306.1 |
| C26 |
N21 |
C22 |
H9 |
32.1 |
60.0 |
| C26 |
N21 |
C22 |
H10 |
152.1 |
180.0 |
| C26 |
N21 |
C22 |
H11 |
272.1 |
300.0 |
| C27 |
C26 |
N21 |
H16 |
239.2 |
240.0 |
| C27 |
C26 |
N21 |
H17 |
120.8 |
120.0 |
| H16 |
C26 |
N21 |
H17 |
241.6 |
240.1 |
| N20 |
C27 |
C26 |
H18 |
120.4 |
119.7 |
| N20 |
C27 |
C26 |
H19 |
239.6 |
240.4 |
| N21 |
C26 |
C27 |
H16 |
120.8 |
120.0 |
| N21 |
C26 |
C27 |
H17 |
239.2 |
240.0 |
| H16 |
C26 |
C27 |
H17 |
118.5 |
120.0 |
| H1 |
C02 |
C01 |
O10 |
0.0 |
360.0 |
| H1 |
C02 |
C01 |
C06 |
181.0 |
180.2 |
| C04 |
C05 |
H2 |
C06 |
180.0 |
179.8 |
| H2 |
C05 |
C06 |
C07 |
359.2 |
0.0 |
| N12 |
C16 |
H5 |
C17 |
180.0 |
180.1 |
| H5 |
C16 |
C17 |
BR1 |
0.5 |
360.0 |
| H6 |
C18 |
C17 |
BR1 |
359.2 |
0.1 |
| C13 |
C19 |
H7 |
C18 |
180.0 |
179.9 |
| H7 |
C19 |
C18 |
H6 |
360.0 |
359.9 |
| H9 |
C22 |
N21 |
C26 |
32.1 |
60.0 |
| N21 |
C22 |
H9 |
H10 |
120.0 |
120.0 |
| N21 |
C22 |
H9 |
H11 |
240.0 |
240.1 |
| H10 |
C22 |
H9 |
H11 |
120.0 |
120.0 |
| H10 |
C22 |
N21 |
C26 |
152.1 |
180.0 |
| N21 |
C22 |
H10 |
H9 |
240.0 |
240.0 |
| N21 |
C22 |
H10 |
H11 |
120.0 |
120.0 |
| H9 |
C22 |
H10 |
H11 |
240.0 |
240.0 |
| H11 |
C22 |
N21 |
C26 |
272.1 |
300.0 |
| N21 |
C22 |
H11 |
H9 |
120.0 |
119.9 |
| N21 |
C22 |
H11 |
H10 |
240.0 |
240.0 |
| H9 |
C22 |
H11 |
H10 |
120.0 |
120.0 |
| C25 |
C24 |
H12 |
H13 |
116.7 |
239.5 |
| H12 |
C24 |
C25 |
H14 |
262.1 |
174.1 |
| H12 |
C24 |
C25 |
H15 |
19.5 |
54.1 |
| H12 |
C24 |
N20 |
C27 |
199.2 |
68.9 |
| C25 |
C24 |
H13 |
H12 |
243.3 |
120.5 |
| H13 |
C24 |
C25 |
H14 |
20.0 |
53.6 |
| H13 |
C24 |
C25 |
H15 |
137.4 |
293.5 |
| H13 |
C24 |
N20 |
C27 |
81.2 |
189.4 |
| H14 |
C25 |
C24 |
H12 |
262.1 |
174.1 |
| H14 |
C25 |
C24 |
H13 |
20.0 |
53.6 |
| C24 |
C25 |
H14 |
H15 |
115.9 |
239.9 |
| H14 |
C25 |
N21 |
C26 |
222.6 |
56.7 |
| H15 |
C25 |
C24 |
H12 |
19.5 |
54.1 |
| H15 |
C25 |
C24 |
H13 |
137.4 |
293.5 |
| C24 |
C25 |
H15 |
H14 |
244.1 |
120.1 |
| H15 |
C25 |
N21 |
C26 |
105.2 |
176.7 |
| N21 |
C26 |
H16 |
H17 |
117.6 |
119.9 |
| C27 |
C26 |
H16 |
H17 |
242.4 |
239.9 |
| N21 |
C26 |
H17 |
H16 |
242.4 |
240.1 |
| C27 |
C26 |
H17 |
H16 |
117.6 |
120.1 |
| N20 |
C27 |
H18 |
C26 |
237.6 |
241.0 |
| N20 |
C27 |
H18 |
H19 |
118.8 |
120.4 |
| H18 |
C27 |
C26 |
H16 |
68.0 |
66.4 |
| H18 |
C27 |
C26 |
H17 |
309.6 |
306.4 |
| N20 |
C27 |
H19 |
C26 |
122.4 |
119.0 |
| N20 |
C27 |
H19 |
H18 |
241.2 |
239.6 |
| H19 |
C27 |
C26 |
H16 |
308.8 |
305.7 |
| H19 |
C27 |
C26 |
H17 |
190.4 |
185.7 |