PDB Chemical Component RIV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RIV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N2	1.504	1.504
C1	C3	1.544	1.544
N2	C4	1.404	1.404
N2	C12	1.428	1.428
C3	O5	1.435	1.435
C4	C6	1.527	1.527
C4	O13	1.220	1.220
O5	C6	1.440	1.440
C7	C8	1.403	1.403
C7	C9	1.430	1.430
C7	N14	1.445	1.445
C8	C10	1.393	1.393
C9	C11	1.411	1.411
C10	C12	1.417	1.417
C11	C12	1.408	1.408
N14	C15	1.397	1.397
N14	C16	1.484	1.484
C15	O17	1.360	1.360
C15	O19	1.218	1.218
C16	C18	1.539	1.539
O17	C18	1.427	1.427
C18	C20	1.556	1.556
C20	N21	1.509	1.509
N21	C22	1.414	1.414
C22	C25	1.501	1.501
C22	O28	1.218	1.218
S23	C24	1.592	1.592
S23	C25	1.630	1.630
C24	C26	1.405	1.405
C24	CL	1.767	1.767
C25	C27	1.395	1.395
C26	C27	1.404	1.404
C1	H11C	1.101	1.101
C1	H12C	1.100	1.100
C3	H31C	1.100	1.100
C3	H32C	1.100	1.100
C6	H61C	1.100	1.100
C6	H62C	1.100	1.100
C8	H8	1.080	1.080
C9	H9	1.081	1.081
C10	H10	1.080	1.080
C11	H11	1.080	1.080
C16	H161	1.100	1.100
C16	H162	1.100	1.100
C18	H18	1.100	1.100
C20	H201	1.100	1.100
C20	H202	1.100	1.100
N21	H21	1.000	1.000
C26	H26	1.080	1.080
C27	H27	1.080	1.080

Bond Angles for RIV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N2	C1	C3	112.6	112.6
C1	N2	C4	121.1	121.1
C1	N2	C12	118.5	118.5
N2	C1	H11C	108.4	108.4
N2	C1	H12C	107.7	107.7
C1	C3	O5	108.3	108.3
C3	C1	H11C	108.4	108.4
C3	C1	H12C	107.7	107.7
C1	C3	H31C	109.8	109.9
C1	C3	H32C	110.2	110.1
C4	N2	C12	120.3	120.3
N2	C4	C6	119.6	119.6
N2	C4	O13	120.5	120.5
N2	C12	C10	119.8	119.8
N2	C12	C11	121.0	121.0
C3	O5	C6	112.5	112.5
O5	C3	H31C	109.9	109.9
O5	C3	H32C	110.1	110.2
C6	C4	O13	119.9	119.9
C4	C6	O5	111.1	111.1
C4	C6	H61C	108.9	108.9
C4	C6	H62C	108.6	108.6
O5	C6	H61C	108.9	108.9
O5	C6	H62C	108.6	108.6
C8	C7	C9	118.6	118.6
C8	C7	N14	119.4	119.4
C7	C8	C10	120.6	120.6
C7	C8	H8	119.7	119.7
C9	C7	N14	122.0	122.0
C7	C9	C11	120.8	120.8
C7	C9	H9	119.6	119.6
C7	N14	C15	127.4	127.4
C7	N14	C16	125.2	125.2
C8	C10	C12	121.1	121.1
C10	C8	H8	119.7	119.7
C8	C10	H10	119.5	119.5
C9	C11	C12	119.7	119.7
C11	C9	H9	119.6	119.6
C9	C11	H11	120.2	120.2
C10	C12	C11	119.2	119.2
C12	C10	H10	119.4	119.4
C12	C11	H11	120.1	120.1
C15	N14	C16	107.4	107.4
N14	C15	O17	113.5	113.5
N14	C15	O19	124.2	124.2
N14	C16	C18	102.9	102.9
N14	C16	H161	111.7	111.7
N14	C16	H162	113.1	113.1
O17	C15	O19	122.3	122.3
C15	O17	C18	108.0	108.0
C16	C18	O17	107.3	107.3
C16	C18	C20	112.7	112.7
C18	C16	H161	111.7	111.7
C18	C16	H162	113.1	113.1
C16	C18	H18	109.6	109.7
O17	C18	C20	112.0	112.0
O17	C18	H18	110.5	110.4
C18	C20	N21	117.0	117.0
C20	C18	H18	104.7	104.7
C18	C20	H201	107.0	107.0
C18	C20	H202	105.3	105.3
C20	N21	C22	120.4	120.4
N21	C20	H201	107.0	107.0
N21	C20	H202	105.3	105.3
C20	N21	H21	119.8	119.8
N21	C22	C25	121.8	121.8
N21	C22	O28	119.6	119.6
C22	N21	H21	119.8	119.8
C25	C22	O28	118.5	118.5
C22	C25	S23	124.6	124.6
C22	C25	C27	126.7	126.7
C24	S23	C25	98.7	98.7
S23	C24	C26	108.9	108.9
S23	C24	CL	125.2	125.2
S23	C25	C27	108.7	108.7
C26	C24	CL	125.9	125.9
C24	C26	C27	112.3	112.3
C24	C26	H26	123.8	123.8
C25	C27	C26	111.3	111.3
C25	C27	H27	124.3	124.3
C27	C26	H26	123.9	123.9
C26	C27	H27	124.3	124.3
H11C	C1	H12C	112.0	112.0
H31C	C3	H32C	108.6	108.5
H61C	C6	H62C	110.7	110.7
H161	C16	H162	104.5	104.5
H201	C20	H202	115.6	115.6

Torsion Angles for RIV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N2	C1	C3	O5	44.5	44.5
C3	C1	N2	H11C	240.0	240.0
C3	C1	N2	H12C	118.6	118.6
N2	C1	C3	H31C	164.5	164.5
N2	C1	C3	H32C	284.0	284.0
C4	N2	C1	C12	179.7	179.7
C1	N2	C4	C6	359.8	359.8
C1	N2	C4	O13	179.9	179.9
C1	N2	C12	C10	90.9	90.9
C1	N2	C12	C11	271.1	271.1
H11C	C1	N2	H12C	238.6	238.6
C3	C1	N2	C4	347.7	347.7
C3	C1	N2	C12	168.0	168.0
N2	C1	C3	H11C	120.0	120.0
N2	C1	C3	H12C	241.3	241.4
C1	C3	O5	C6	291.1	291.1
O5	C3	C1	H31C	240.0	240.0
O5	C3	C1	H32C	120.5	120.5
H11C	C1	C3	H12C	121.4	121.4
H31C	C3	C1	H32C	240.5	240.5
C4	N2	C1	C3	347.7	347.7
C1	N2	C4	C12	180.3	180.3
C4	N2	C1	H11C	107.7	107.7
C4	N2	C1	H12C	229.1	229.1
C4	N2	C12	C10	271.2	271.2
C4	N2	C12	C11	91.3	91.3
C6	C4	N2	O13	179.9	179.9
N2	C4	C6	O5	340.2	340.2
N2	C4	C6	H61C	100.2	100.2
N2	C4	C6	H62C	220.8	220.8
C12	N2	C1	C3	168.0	168.0
C1	N2	C12	C4	179.7	179.7
C12	N2	C1	H11C	287.9	287.9
C12	N2	C1	H12C	49.3	49.4
C12	N2	C4	C6	179.6	179.6
C12	N2	C4	O13	359.6	359.6
C8	C10	C12	N2	180.4	180.4
C9	C11	C12	N2	180.1	180.1
C10	C12	N2	C11	179.9	179.9
N2	C12	C10	H10	0.4	0.4
N2	C12	C11	H11	0.1	0.1
O5	C3	C1	H11C	284.5	284.5
O5	C3	C1	H12C	163.2	163.1
C1	C3	O5	H31C	120.0	120.0
C1	C3	O5	H32C	239.5	239.5
C4	C6	O5	C3	55.8	55.8
C3	O5	C6	H61C	295.8	295.8
C3	O5	C6	H62C	175.1	175.1
H31C	C3	O5	H32C	119.5	119.5
C6	C4	N2	C12	179.6	179.6
N2	C4	C6	O13	180.1	180.1
C3	O5	C6	C4	55.8	55.8
O5	C6	C4	H61C	240.0	240.0
O5	C6	C4	H62C	119.3	119.3
H61C	C6	C4	H62C	239.3	239.3
O13	C4	N2	C12	359.6	359.6
N2	C4	O13	C6	179.9	179.9
O13	C4	C6	O5	160.1	160.1
O13	C4	C6	H61C	280.1	280.1
O13	C4	C6	H62C	40.8	40.8
C6	O5	C3	H31C	171.1	171.0
C6	O5	C3	H32C	51.6	51.5
O5	C6	C4	O13	160.1	160.1
C4	C6	O5	H61C	120.0	120.0
C4	C6	O5	H62C	240.7	240.7
H61C	C6	O5	H62C	120.7	120.7
C9	C7	C8	N14	180.5	180.5
C8	C7	C9	C11	0.6	0.6
C8	C7	C9	H9	180.6	180.6
C8	C7	N14	C15	179.5	179.5
C8	C7	N14	C16	358.9	358.9
C7	C8	C10	C12	359.7	359.7
C10	C8	C7	H8	180.0	180.0
C7	C8	C10	H10	179.7	179.7
C8	C7	C9	N14	179.4	179.4
C9	C7	C8	C10	359.9	359.9
C9	C7	C8	H8	179.9	179.9
C9	C7	N14	C15	358.9	358.9
C9	C7	N14	C16	178.3	178.3
C7	C9	C11	C12	359.4	359.4
C11	C9	C7	H9	180.0	180.0
C7	C9	C11	H11	179.4	179.4
C8	C7	N14	C9	180.6	180.6
N14	C7	C8	C10	179.3	179.3
N14	C7	C8	H8	359.3	359.3
N14	C7	C9	C11	181.1	181.1
N14	C7	C9	H9	1.1	1.1
C15	N14	C7	C16	180.6	180.6
C7	N14	C15	O17	178.4	178.4
C7	N14	C15	O19	359.0	359.0
C7	N14	C16	C18	176.0	176.0
C7	N14	C16	H161	296.0	296.0
C7	N14	C16	H162	53.6	53.6
N2	C12	C10	C8	180.4	180.4
C10	C8	C7	C9	359.9	359.9
C10	C8	C7	N14	179.3	179.3
C7	C8	C10	H8	180.0	180.0
C8	C10	C12	C11	0.2	0.2
C12	C10	C8	H10	180.0	180.0
N2	C12	C11	C9	180.1	180.1
C11	C9	C7	N14	181.1	181.1
C7	C9	C11	H9	180.0	180.0
C10	C12	C11	C9	0.2	0.2
C12	C11	C9	H11	180.0	180.0
N2	C12	C10	C11	180.1	180.1
C12	C10	C8	H8	179.8	179.8
C8	C10	C12	H10	180.0	180.0
C9	C11	C12	C10	0.2	0.2
C10	C12	C11	H11	180.2	180.2
N2	C12	C11	C10	179.9	179.9
C12	C11	C9	H9	179.4	179.4
C9	C11	C12	H11	180.0	180.0
C11	C12	C10	H10	180.2	180.3
C7	N14	C15	C16	179.5	179.5
C15	N14	C16	C18	355.5	355.5
C15	N14	C16	H161	115.5	115.5
C15	N14	C16	H162	233.1	233.1
O17	C15	N14	O19	179.4	179.4
N14	C15	O17	C18	6.7	6.7
C7	N14	C16	C15	180.5	180.5
C16	N14	C15	O17	358.9	358.9
C16	N14	C15	O19	179.5	179.5
N14	C16	C18	O17	8.4	8.4
N14	C16	C18	C20	132.1	132.1
C18	C16	N14	H161	240.0	240.0
C18	C16	N14	H162	122.4	122.4
N14	C16	C18	H18	248.4	248.4
H161	C16	N14	H162	242.4	242.4
O17	C15	N14	C16	358.9	358.9
N14	C15	O17	O19	180.5	180.5
C16	C18	O17	C15	350.7	350.7
C15	O17	C18	C20	226.5	226.5
C15	O17	C18	H18	110.2	110.2
O19	C15	N14	C16	179.5	179.5
N14	C15	O19	O17	179.4	179.4
O19	C15	O17	C18	186.2	186.2
N14	C16	C18	H161	120.0	120.0
N14	C16	C18	H162	237.6	237.6
C15	O17	C18	C16	350.7	350.7
O17	C18	C16	C20	236.2	236.2
O17	C18	C16	H18	120.0	120.0
C16	C18	C20	N21	297.2	297.2
C20	C18	C16	H18	243.8	243.8
C16	C18	C20	H201	57.2	57.2
C16	C18	C20	H202	180.8	180.8
H161	C16	C18	H162	117.6	117.6
C18	O17	C15	O19	186.2	186.2
C16	C18	O17	C20	124.2	124.2
O17	C18	C16	H161	248.4	248.4
O17	C18	C16	H162	130.7	130.7
C16	C18	O17	H18	240.5	240.5
O17	C18	C20	N21	58.4	58.4
C20	C18	O17	H18	116.3	116.3
O17	C18	C20	H201	178.3	178.3
O17	C18	C20	H202	301.9	301.9
C16	C18	C20	O17	238.9	238.9
C20	C18	C16	H161	12.1	12.1
C20	C18	C16	H162	254.5	254.5
C16	C18	C20	H18	119.1	119.2
O17	C18	C20	H18	240.3	240.3
C18	C20	N21	C22	109.5	109.5
N21	C20	C18	H201	240.0	240.0
N21	C20	C18	H202	116.5	116.5
C18	C20	N21	H21	289.5	289.5
H201	C20	C18	H202	236.5	236.5
N21	C20	C18	H18	178.1	178.1
C18	C20	N21	H201	120.0	120.0
C18	C20	N21	H202	243.5	243.5
C20	N21	C22	C25	177.2	177.2
C20	N21	C22	O28	358.5	358.5
C22	N21	C20	H21	180.0	180.0
H201	C20	N21	H202	123.5	123.5
C22	N21	C20	H201	349.5	349.5
C22	N21	C20	H202	226.0	226.0
C20	N21	C22	H21	180.0	180.0
C25	C22	N21	O28	178.7	178.7
N21	C22	C25	S23	168.3	168.3
N21	C22	C25	C27	347.5	347.5
N21	C22	C25	O28	181.3	181.3
C25	C22	N21	H21	357.2	357.2
C24	S23	C25	C22	179.7	179.7
S23	C25	C22	C27	180.8	180.8
C22	C25	C27	C26	180.3	180.3
C22	C25	C27	H27	0.3	0.3
N21	C22	O28	C25	178.7	178.7
O28	C22	N21	H21	178.6	178.6
O28	C22	C25	S23	347.0	347.0
O28	C22	C25	C27	166.2	166.2
C22	C25	S23	C24	179.7	179.7
C24	S23	C25	C27	0.3	0.3
C26	C24	S23	CL	180.5	180.5
S23	C24	C26	C27	0.0	0.0
S23	C24	C26	H26	180.0	180.0
S23	C25	C22	O28	347.0	347.0
C22	C25	S23	C27	179.3	179.3
C25	S23	C24	C26	359.8	359.8
C25	S23	C24	CL	179.2	179.2
S23	C25	C27	C26	359.7	359.7
S23	C25	C27	H27	179.7	179.7
C26	C24	S23	C25	359.8	359.8
S23	C24	C26	CL	179.4	179.4
C25	C27	C26	C24	0.2	0.2
C27	C26	C24	H26	180.0	180.0
C24	C26	C27	H27	180.2	180.2
CL	C24	S23	C25	179.2	179.2
S23	C24	CL	C26	180.6	180.6
CL	C24	C26	C27	180.6	180.6
CL	C24	C26	H26	0.6	0.6
C27	C25	C22	O28	166.2	166.2
C22	C25	C27	S23	180.7	180.7
C24	C26	C27	C25	0.2	0.2
C25	C27	C26	H26	180.2	180.2
C26	C27	C25	H27	180.0	180.0
C27	C26	C24	CL	180.6	180.6
C24	C26	C27	H26	180.0	180.0
C25	C27	C26	H27	180.0	180.0
N2	C1	H11C	C3	237.4	237.4
H11C	C1	N2	C4	107.7	107.7
H11C	C1	N2	C12	287.9	287.9
N2	C1	H11C	H12C	118.7	118.7
H11C	C1	C3	O5	284.5	284.5
C3	C1	H11C	H12C	241.3	241.3
H11C	C1	C3	H31C	44.5	44.6
H11C	C1	C3	H32C	164.1	164.0
N2	C1	H12C	C3	121.8	121.7
H12C	C1	N2	C4	229.1	229.1
H12C	C1	N2	C12	49.3	49.4
N2	C1	H12C	H11C	240.9	240.9
H12C	C1	C3	O5	163.2	163.1
C3	C1	H12C	H11C	119.1	119.1
H12C	C1	C3	H31C	283.2	283.1
H12C	C1	C3	H32C	42.7	42.6
C1	C3	H31C	O5	241.0	241.0
H31C	C3	C1	H11C	44.5	44.6
H31C	C3	C1	H12C	283.2	283.1
C1	C3	H31C	H32C	120.5	120.5
H31C	C3	O5	C6	171.1	171.0
O5	C3	H31C	H32C	239.5	239.5
C1	C3	H32C	O5	119.4	119.4
H32C	C3	C1	H11C	164.1	164.0
H32C	C3	C1	H12C	42.7	42.6
C1	C3	H32C	H31C	239.7	239.7
H32C	C3	O5	C6	51.6	51.5
O5	C3	H32C	H31C	120.3	120.3
H61C	C6	C4	O13	280.1	280.1
C4	C6	H61C	O5	238.7	238.7
C4	C6	H61C	H62C	119.4	119.4
O5	C6	H61C	H62C	240.7	240.7
H62C	C6	C4	O13	40.8	40.8
C4	C6	H62C	O5	120.9	120.9
C4	C6	H62C	H61C	240.4	240.4
O5	C6	H62C	H61C	119.6	119.6
H8	C8	C7	C9	179.9	179.9
H8	C8	C7	N14	359.3	359.3
C7	C8	H8	C10	180.0	180.0
H8	C8	C10	C12	179.8	179.8
H8	C8	C10	H10	359.8	359.7
H9	C9	C7	N14	1.1	1.1
C7	C9	H9	C11	180.0	180.0
H9	C9	C11	C12	179.4	179.4
H9	C9	C11	H11	359.4	359.4
C8	C10	H10	C12	180.0	180.0
H10	C10	C8	H8	359.8	359.7
H10	C10	C12	C11	180.2	180.3
C9	C11	H11	C12	180.0	180.0
H11	C11	C9	H9	359.4	359.4
N14	C16	H161	C18	245.3	245.3
N14	C16	H161	H162	122.6	122.6
H161	C16	C18	O17	248.4	248.4
H161	C16	C18	C20	12.1	12.1
C18	C16	H161	H162	237.3	237.3
H161	C16	C18	H18	128.4	128.4
N14	C16	H162	C18	116.5	116.5
N14	C16	H162	H161	238.3	238.3
H162	C16	C18	O17	130.7	130.7
H162	C16	C18	C20	254.5	254.5
C18	C16	H162	H161	121.8	121.8
H162	C16	C18	H18	10.7	10.7
C16	C18	H18	O17	118.1	118.1
C16	C18	H18	C20	238.8	238.8
H18	C18	C16	H161	128.4	128.4
H18	C18	C16	H162	10.7	10.7
O17	C18	H18	C20	120.8	120.7
H18	C18	C20	N21	178.1	178.1
H18	C18	C20	H201	298.1	298.1
H18	C18	C20	H202	61.6	61.6
C18	C20	H201	N21	233.8	233.8
H201	C20	C18	H18	298.1	298.1
C18	C20	H201	H202	116.9	116.9
H201	C20	N21	C22	349.5	349.5
N21	C20	H201	H202	243.2	243.2
H201	C20	N21	H21	169.5	169.5
C18	C20	H202	N21	124.3	124.3
H202	C20	C18	H18	61.6	61.6
C18	C20	H202	H201	242.1	242.1
H202	C20	N21	C22	226.0	226.0
N21	C20	H202	H201	117.8	117.8
H202	C20	N21	H21	46.0	46.0
C20	N21	H21	C22	180.0	180.0
H21	N21	C20	H201	169.5	169.5
H21	N21	C20	H202	46.0	46.0
H21	N21	C22	C25	357.2	357.2
H21	N21	C22	O28	178.6	178.6
H26	C26	C24	CL	0.6	0.6
C24	C26	H26	C27	180.0	180.0
H26	C26	C27	H27	0.2	0.2
C25	C27	H27	C26	180.0	180.0
H27	C27	C26	H26	0.2	0.2