PDB Chemical Component RIS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RIS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O12 |
P9 |
1.522 |
1.617 |
O12 |
H12 |
0.950 |
0.982 |
P9 |
O11 |
1.684 |
1.500 |
P9 |
O10 |
1.659 |
1.616 |
P9 |
C8 |
1.751 |
1.850 |
C8 |
O13 |
1.443 |
1.428 |
C8 |
P14 |
1.749 |
1.825 |
C8 |
C7 |
1.534 |
1.550 |
O13 |
H13 |
0.950 |
0.973 |
P14 |
O16 |
1.512 |
1.617 |
P14 |
O15 |
1.675 |
1.616 |
P14 |
O17 |
1.675 |
1.499 |
O16 |
H16 |
0.950 |
0.981 |
O15 |
H15 |
0.950 |
0.980 |
C7 |
C2 |
1.515 |
1.508 |
C7 |
HC71 |
1.115 |
1.097 |
C7 |
HC72 |
1.115 |
1.098 |
C2 |
C1 |
1.393 |
1.380 |
C2 |
C3 |
1.391 |
1.375 |
C1 |
C6 |
1.394 |
1.391 |
C1 |
HC1 |
1.103 |
1.087 |
C6 |
C5 |
1.385 |
1.385 |
C6 |
HC6 |
1.103 |
1.084 |
C5 |
N4 |
1.342 |
1.352 |
C5 |
HC5 |
1.102 |
1.084 |
N4 |
C3 |
1.343 |
1.351 |
C3 |
HC3 |
1.103 |
1.086 |
HO1 |
O10 |
0.950 |
0.980 |
Bond Angles for RIS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
P9 |
O12 |
H12 |
110.6 |
118.9 |
O12 |
P9 |
O11 |
110.6 |
115.3 |
O12 |
P9 |
O10 |
109.4 |
103.4 |
O12 |
P9 |
C8 |
109.7 |
102.9 |
O11 |
P9 |
O10 |
109.7 |
115.0 |
O11 |
P9 |
C8 |
108.4 |
114.7 |
O10 |
P9 |
C8 |
109.0 |
104.0 |
P9 |
C8 |
O13 |
107.8 |
100.9 |
P9 |
C8 |
P14 |
110.8 |
120.9 |
P9 |
C8 |
C7 |
105.2 |
107.2 |
O13 |
C8 |
P14 |
110.2 |
103.7 |
O13 |
C8 |
C7 |
111.6 |
109.4 |
C8 |
O13 |
H13 |
107.8 |
108.1 |
P14 |
C8 |
C7 |
111.1 |
113.5 |
C8 |
P14 |
O16 |
107.6 |
103.3 |
C8 |
P14 |
O15 |
108.1 |
103.8 |
C8 |
P14 |
O17 |
113.6 |
115.5 |
C8 |
C7 |
C2 |
119.0 |
116.8 |
C8 |
C7 |
HC71 |
108.8 |
108.4 |
C8 |
C7 |
HC72 |
108.8 |
109.5 |
O16 |
P14 |
O15 |
111.6 |
103.0 |
O16 |
P14 |
O17 |
108.3 |
115.3 |
P14 |
O16 |
H16 |
107.6 |
118.9 |
O15 |
P14 |
O17 |
107.7 |
114.4 |
P14 |
O15 |
H15 |
108.1 |
118.9 |
C2 |
C7 |
HC71 |
108.8 |
108.7 |
C2 |
C7 |
HC72 |
108.8 |
107.4 |
C7 |
C2 |
C1 |
116.6 |
120.3 |
C7 |
C2 |
C3 |
124.9 |
120.4 |
HC71 |
C7 |
HC72 |
101.3 |
105.5 |
C1 |
C2 |
C3 |
118.5 |
119.3 |
C2 |
C1 |
C6 |
119.9 |
119.0 |
C2 |
C1 |
HC1 |
120.0 |
121.4 |
C2 |
C3 |
N4 |
120.7 |
123.4 |
C2 |
C3 |
HC3 |
121.4 |
121.9 |
C6 |
C1 |
HC1 |
120.1 |
119.6 |
C1 |
C6 |
C5 |
118.7 |
117.9 |
C1 |
C6 |
HC6 |
121.0 |
121.0 |
C5 |
C6 |
HC6 |
120.3 |
121.1 |
C6 |
C5 |
N4 |
120.8 |
124.0 |
C6 |
C5 |
HC5 |
121.2 |
120.8 |
N4 |
C5 |
HC5 |
118.0 |
115.2 |
C5 |
N4 |
C3 |
121.4 |
116.4 |
N4 |
C3 |
HC3 |
117.8 |
114.7 |
Torsion Angles for RIS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O11 |
P9 |
O12 |
O10 |
120.9 |
233.6 |
O11 |
P9 |
O12 |
C8 |
240.4 |
125.6 |
O10 |
P9 |
O12 |
C8 |
119.5 |
251.9 |
O12 |
P9 |
C8 |
O13 |
178.1 |
180.4 |
O12 |
P9 |
C8 |
P14 |
298.8 |
293.7 |
O12 |
P9 |
C8 |
C7 |
58.9 |
65.9 |
H12 |
O12 |
P9 |
O11 |
180.0 |
308.2 |
H12 |
O12 |
P9 |
O10 |
59.1 |
74.5 |
H12 |
O12 |
P9 |
C8 |
299.6 |
182.6 |
O11 |
P9 |
O12 |
H12 |
180.0 |
308.2 |
O12 |
P9 |
O11 |
O10 |
239.3 |
120.2 |
O12 |
P9 |
O11 |
C8 |
120.4 |
240.8 |
O10 |
P9 |
O11 |
C8 |
241.1 |
120.6 |
O11 |
P9 |
C8 |
O13 |
299.0 |
54.4 |
O11 |
P9 |
C8 |
P14 |
59.7 |
167.8 |
O11 |
P9 |
C8 |
C7 |
179.8 |
300.0 |
O10 |
P9 |
O12 |
H12 |
59.1 |
74.5 |
O12 |
P9 |
O10 |
O11 |
121.5 |
233.5 |
O12 |
P9 |
O10 |
C8 |
240.0 |
107.2 |
O11 |
P9 |
O10 |
C8 |
118.5 |
233.7 |
O10 |
P9 |
C8 |
O13 |
58.4 |
288.0 |
O10 |
P9 |
C8 |
P14 |
179.1 |
41.3 |
O10 |
P9 |
C8 |
C7 |
299.2 |
173.5 |
C8 |
P9 |
O12 |
H12 |
299.6 |
182.6 |
O12 |
P9 |
C8 |
O11 |
239.1 |
125.9 |
O12 |
P9 |
C8 |
O10 |
119.7 |
252.4 |
O11 |
P9 |
C8 |
O10 |
240.6 |
126.5 |
O13 |
C8 |
P9 |
P14 |
239.3 |
246.7 |
O13 |
C8 |
P9 |
C7 |
119.2 |
114.5 |
P9 |
C8 |
O13 |
H13 |
180.0 |
175.2 |
P14 |
C8 |
P9 |
C7 |
239.9 |
227.8 |
P9 |
C8 |
P14 |
O16 |
302.3 |
62.7 |
P9 |
C8 |
P14 |
O15 |
63.0 |
315.5 |
P9 |
C8 |
P14 |
O17 |
182.4 |
189.5 |
P9 |
C8 |
C7 |
C2 |
175.4 |
168.6 |
P9 |
C8 |
C7 |
HC71 |
50.1 |
291.8 |
P9 |
C8 |
C7 |
HC72 |
300.6 |
46.3 |
P9 |
C8 |
O13 |
P14 |
121.1 |
125.8 |
P9 |
C8 |
O13 |
C7 |
245.0 |
247.3 |
P14 |
C8 |
O13 |
C7 |
123.9 |
121.5 |
O13 |
C8 |
P14 |
O16 |
61.6 |
174.6 |
O13 |
C8 |
P14 |
O15 |
182.2 |
67.3 |
O13 |
C8 |
P14 |
O17 |
301.7 |
301.4 |
O13 |
C8 |
C7 |
C2 |
58.8 |
60.0 |
O13 |
C8 |
C7 |
HC71 |
293.5 |
183.2 |
O13 |
C8 |
C7 |
HC72 |
184.0 |
297.8 |
P9 |
C8 |
P14 |
O13 |
240.7 |
248.2 |
P9 |
C8 |
P14 |
C7 |
116.5 |
129.5 |
O13 |
C8 |
P14 |
C7 |
235.8 |
241.3 |
P14 |
C8 |
O13 |
H13 |
58.9 |
49.4 |
P14 |
C8 |
C7 |
C2 |
295.3 |
304.7 |
P14 |
C8 |
C7 |
HC71 |
170.1 |
67.9 |
P14 |
C8 |
C7 |
HC72 |
60.6 |
182.5 |
O16 |
P14 |
C8 |
O15 |
239.3 |
107.2 |
O16 |
P14 |
C8 |
O17 |
119.9 |
233.2 |
C8 |
P14 |
O16 |
H16 |
180.0 |
177.7 |
O15 |
P14 |
C8 |
O17 |
240.5 |
126.0 |
C8 |
P14 |
O15 |
H15 |
180.0 |
181.9 |
P9 |
C8 |
C7 |
O13 |
116.6 |
108.6 |
P9 |
C8 |
C7 |
P14 |
240.0 |
223.9 |
O13 |
C8 |
C7 |
P14 |
123.4 |
115.3 |
C7 |
C8 |
O13 |
H13 |
295.0 |
287.9 |
C7 |
C8 |
P14 |
O16 |
185.8 |
293.3 |
C7 |
C8 |
P14 |
O15 |
306.4 |
186.0 |
C7 |
C8 |
P14 |
O17 |
65.9 |
60.0 |
C2 |
C7 |
C8 |
HC71 |
125.3 |
236.8 |
C2 |
C7 |
C8 |
HC72 |
234.8 |
122.3 |
C8 |
C7 |
C2 |
C1 |
153.2 |
270.0 |
C8 |
C7 |
C2 |
C3 |
332.2 |
90.0 |
HC71 |
C7 |
C8 |
HC72 |
109.5 |
245.4 |
H13 |
O13 |
C8 |
P14 |
58.9 |
49.4 |
H13 |
O13 |
C8 |
C7 |
295.0 |
287.9 |
O16 |
P14 |
C8 |
C7 |
185.8 |
293.3 |
C8 |
P14 |
O16 |
O15 |
118.4 |
252.2 |
C8 |
P14 |
O16 |
O17 |
236.8 |
126.9 |
O15 |
P14 |
O16 |
O17 |
118.4 |
234.7 |
O16 |
P14 |
O15 |
H15 |
298.1 |
74.5 |
O15 |
P14 |
C8 |
C7 |
306.4 |
186.0 |
C8 |
P14 |
O15 |
O16 |
241.9 |
107.4 |
C8 |
P14 |
O15 |
O17 |
123.2 |
233.3 |
O16 |
P14 |
O15 |
O17 |
241.2 |
125.9 |
O15 |
P14 |
O16 |
H16 |
61.6 |
285.5 |
O17 |
P14 |
C8 |
C7 |
65.9 |
60.0 |
C8 |
P14 |
O17 |
O16 |
119.4 |
239.6 |
C8 |
P14 |
O17 |
O15 |
240.3 |
120.4 |
O16 |
P14 |
O17 |
O15 |
120.9 |
240.8 |
O17 |
P14 |
O16 |
H16 |
303.2 |
50.8 |
O17 |
P14 |
O15 |
H15 |
56.9 |
308.6 |
H16 |
O16 |
P14 |
O15 |
61.6 |
285.5 |
H16 |
O16 |
P14 |
O17 |
303.2 |
50.8 |
H15 |
O15 |
P14 |
O17 |
56.9 |
308.6 |
C8 |
C7 |
C2 |
HC71 |
234.7 |
123.0 |
C8 |
C7 |
C2 |
HC72 |
125.2 |
236.6 |
HC71 |
C7 |
C2 |
HC72 |
250.5 |
113.6 |
C1 |
C2 |
C7 |
C3 |
181.0 |
180.0 |
C7 |
C2 |
C1 |
C6 |
179.3 |
180.0 |
C7 |
C2 |
C1 |
HC1 |
359.3 |
0.1 |
C7 |
C2 |
C3 |
N4 |
180.8 |
180.0 |
C7 |
C2 |
C3 |
HC3 |
0.8 |
0.0 |
C8 |
C7 |
HC71 |
C2 |
131.0 |
232.1 |
C8 |
C7 |
HC71 |
HC72 |
245.5 |
117.2 |
C2 |
C7 |
HC71 |
HC72 |
114.5 |
245.1 |
HC71 |
C7 |
C2 |
C1 |
278.5 |
146.9 |
HC71 |
C7 |
C2 |
C3 |
97.5 |
327.0 |
C8 |
C7 |
HC72 |
C2 |
229.0 |
127.7 |
C8 |
C7 |
HC72 |
HC71 |
114.5 |
243.5 |
C2 |
C7 |
HC72 |
HC71 |
245.5 |
115.8 |
HC72 |
C7 |
C2 |
C1 |
28.0 |
33.3 |
HC72 |
C7 |
C2 |
C3 |
207.0 |
213.4 |
C1 |
C2 |
C7 |
HC71 |
278.5 |
146.9 |
C1 |
C2 |
C7 |
HC72 |
28.0 |
33.3 |
C7 |
C2 |
C1 |
C3 |
179.1 |
180.0 |
C1 |
C2 |
C3 |
N4 |
359.8 |
0.0 |
C1 |
C2 |
C3 |
HC3 |
179.8 |
180.1 |
C6 |
C1 |
C2 |
HC1 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
360.0 |
0.0 |
C2 |
C1 |
C6 |
HC6 |
180.0 |
180.0 |
C3 |
C2 |
C7 |
HC71 |
97.5 |
327.0 |
C3 |
C2 |
C7 |
HC72 |
207.0 |
213.4 |
C7 |
C2 |
C3 |
C1 |
181.0 |
180.0 |
C3 |
C2 |
C1 |
C6 |
0.2 |
360.0 |
C3 |
C2 |
C1 |
HC1 |
180.2 |
180.0 |
C5 |
N4 |
C3 |
C2 |
0.1 |
359.9 |
N4 |
C3 |
C2 |
HC3 |
180.0 |
179.9 |
C6 |
C1 |
C2 |
C3 |
0.2 |
360.0 |
C2 |
C1 |
C6 |
HC1 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
HC6 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
N4 |
359.9 |
360.0 |
C1 |
C6 |
C5 |
HC5 |
179.8 |
180.0 |
HC1 |
C1 |
C2 |
C3 |
180.2 |
180.0 |
C2 |
C1 |
HC1 |
C6 |
180.0 |
180.0 |
HC1 |
C1 |
C6 |
C5 |
180.0 |
180.0 |
HC1 |
C1 |
C6 |
HC6 |
360.0 |
360.0 |
C5 |
C6 |
C1 |
HC1 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
HC6 |
180.0 |
180.0 |
N4 |
C5 |
C6 |
HC5 |
180.0 |
180.0 |
C6 |
C5 |
N4 |
C3 |
0.1 |
0.1 |
HC6 |
C6 |
C1 |
HC1 |
360.0 |
360.0 |
C1 |
C6 |
HC6 |
C5 |
180.0 |
180.0 |
HC6 |
C6 |
C5 |
N4 |
179.8 |
180.0 |
HC6 |
C6 |
C5 |
HC5 |
359.8 |
360.0 |
C2 |
C3 |
N4 |
C5 |
0.1 |
359.9 |
N4 |
C5 |
C6 |
HC6 |
179.8 |
180.0 |
C6 |
C5 |
N4 |
HC5 |
180.0 |
180.0 |
C5 |
N4 |
C3 |
HC3 |
180.1 |
179.9 |
HC5 |
C5 |
C6 |
HC6 |
359.8 |
360.0 |
C6 |
C5 |
HC5 |
N4 |
180.0 |
180.0 |
HC5 |
C5 |
N4 |
C3 |
180.1 |
180.1 |
C2 |
C3 |
N4 |
HC3 |
180.0 |
180.0 |
C3 |
N4 |
C5 |
HC5 |
180.1 |
180.1 |
C2 |
C3 |
HC3 |
N4 |
180.0 |
180.0 |