PDB Chemical Component RIB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RIB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O5 C5 1.443 1.428
O5 HO5 0.949 0.967
C5 C4 1.555 1.530
C5 H51 1.114 1.090
C5 H52 1.115 1.091
C4 O4 1.428 1.431
C4 C3 1.531 1.543
C4 H4 1.116 1.090
O4 C1 1.446 1.435
C3 O3 1.435 1.429
C3 C2 1.528 1.554
C3 H3 1.114 1.090
O3 HO3 0.950 0.967
C2 O2 1.426 1.429
C2 C1 1.542 1.548
C2 H2 1.114 1.090
O2 HO2 0.951 0.967
C1 O1 1.392 1.429
C1 H1 1.115 1.090
O1 HO1 0.950 0.967

Bond Angles for RIB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 O5 HO5 104.1 106.9
O5 C5 C4 104.1 109.5
O5 C5 H51 114.2 109.5
O5 C5 H52 114.2 109.4
C4 C5 H51 114.2 109.5
C4 C5 H52 114.2 109.5
C5 C4 O4 109.7 109.9
C5 C4 C3 113.1 109.8
C5 C4 H4 106.1 109.8
H51 C5 H52 96.3 109.4
O4 C4 C3 107.0 107.7
O4 C4 H4 112.3 109.9
C4 O4 C1 105.4 110.0
C3 C4 H4 108.7 109.8
C4 C3 O3 108.9 111.2
C4 C3 C2 103.6 102.1
C4 C3 H3 116.5 110.9
O4 C1 C2 107.2 105.1
O4 C1 O1 106.8 110.4
O4 C1 H1 111.9 110.3
O3 C3 C2 116.8 110.8
O3 C3 H3 103.1 110.7
C3 O3 HO3 108.9 106.8
C2 C3 H3 108.5 110.8
C3 C2 O2 110.6 111.1
C3 C2 C1 104.6 101.0
C3 C2 H2 112.4 111.1
O2 C2 C1 110.6 111.2
O2 C2 H2 106.5 111.0
C2 O2 HO2 110.6 106.8
C1 C2 H2 112.3 111.1
C2 C1 O1 106.8 110.4
C2 C1 H1 111.8 110.3
O1 C1 H1 112.1 110.2
C1 O1 HO1 106.8 106.8

Torsion Angles for RIB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C5 O5 H51 234.7 239.9
C4 C5 O5 H52 125.2 120.0
O5 C5 C4 O4 59.3 61.6
O5 C5 C4 C3 178.7 179.9
O5 C5 C4 H4 297.8 300.7
H51 C5 O5 H52 250.5 240.1
HO5 O5 C5 C4 180.0 180.1
HO5 O5 C5 H51 305.2 300.1
HO5 O5 C5 H52 54.8 60.0
C4 C5 O5 HO5 180.0 180.1
O5 C5 C4 H51 125.3 120.1
O5 C5 C4 H52 234.8 240.0
H51 C5 C4 H52 109.5 119.9
O4 C4 C5 C3 240.6 241.7
O4 C4 C5 H4 121.5 120.9
C5 C4 O4 C1 159.3 117.9
C3 C4 C5 H4 240.9 239.2
C5 C4 C3 O3 87.2 100.9
C5 C4 C3 C2 212.3 219.1
C5 C4 C3 H3 331.2 337.2
H51 C5 O5 HO5 305.2 300.1
O5 C5 H51 C4 240.3 239.9
O5 C5 H51 H52 120.2 119.9
C4 C5 H51 H52 239.9 240.1
H51 C5 C4 O4 294.0 301.5
H51 C5 C4 C3 53.4 59.8
H51 C5 C4 H4 172.5 180.6
H52 C5 O5 HO5 54.8 60.0
O5 C5 H52 C4 119.7 120.1
O5 C5 H52 H51 239.8 240.0
C4 C5 H52 H51 120.1 119.9
H52 C5 C4 O4 184.5 181.6
H52 C5 C4 C3 303.9 299.9
H52 C5 C4 H4 63.1 60.7
O4 C4 C5 H51 294.0 301.5
O4 C4 C5 H52 184.5 181.6
C5 C4 O4 C3 123.1 119.6
C5 C4 O4 H4 242.3 239.2
C3 C4 O4 H4 119.3 119.5
O4 C4 C3 O3 208.1 220.5
O4 C4 C3 C2 333.2 338.7
O4 C4 C3 H3 92.1 96.9
C4 O4 C1 C2 329.1 24.4
C4 O4 C1 O1 83.2 143.5
C4 O4 C1 H1 206.2 265.5
C3 C4 C5 H51 53.4 59.8
C3 C4 C5 H52 303.9 299.9
C5 C4 C3 O4 239.1 240.4
C5 C4 C3 H4 117.6 120.8
O4 C4 C3 H4 238.5 240.4
C3 C4 O4 C1 36.2 358.2
O3 C3 C4 C2 235.0 241.7
O3 C3 C4 H3 116.0 123.6
C4 C3 O3 HO3 180.0 174.3
C2 C3 C4 H3 241.0 241.9
C4 C3 C2 O2 248.4 276.0
C4 C3 C2 C1 7.5 34.0
C4 C3 C2 H2 129.6 152.0
H4 C4 C5 H51 172.5 180.6
H4 C4 C5 H52 63.1 60.7
C5 C4 H4 O4 119.8 120.9
C5 C4 H4 C3 238.0 239.2
O4 C4 H4 C3 118.3 118.3
H4 C4 O4 C1 277.0 238.7
H4 C4 C3 O3 329.6 340.1
H4 C4 C3 C2 94.7 98.3
H4 C4 C3 H3 213.6 216.4
C1 O4 C4 C3 36.2 358.2
C1 O4 C4 H4 277.0 238.7
C3 C2 C1 O4 13.6 323.6
O2 C2 C1 O4 132.7 81.6
O4 C1 C2 H2 251.5 205.7
C2 C1 O4 O1 245.8 241.0
C2 C1 O4 H1 122.8 118.9
O1 C1 O4 H1 237.0 237.9
O4 C1 O1 HO1 180.0 61.5
O3 C3 C4 H4 329.6 340.1
C4 C3 O3 C2 116.9 112.9
C4 C3 O3 H3 235.7 236.3
C2 C3 O3 H3 118.8 123.4
O3 C3 C2 O2 8.2 34.5
O3 C3 C2 C1 127.3 152.5
O3 C3 C2 H2 249.3 270.5
C2 C3 C4 H4 94.7 98.3
C4 C3 C2 O3 240.3 241.5
C4 C3 C2 H3 124.4 118.1
O4 C1 C2 C3 13.6 323.6
O3 C3 C2 H3 244.1 236.6
C2 C3 O3 HO3 63.1 61.5
O2 C2 C3 C1 240.9 242.0
O2 C2 C3 H2 118.8 124.1
C3 C2 O2 HO2 180.0 173.1
C1 C2 C3 H2 237.9 242.1
C3 C2 C1 O1 259.5 204.6
C3 C2 C1 H1 136.6 82.5
H3 C3 C4 H4 213.6 216.4
C4 C3 H3 O3 119.2 123.9
C4 C3 H3 C2 243.7 247.3
O3 C3 H3 C2 124.5 123.4
H3 C3 O3 HO3 304.3 298.0
H3 C3 C2 O2 124.0 157.9
H3 C3 C2 C1 243.2 275.9
H3 C3 C2 H2 5.2 33.8
HO3 O3 C3 C2 63.1 61.5
HO3 O3 C3 H3 304.3 298.0
O4 C1 C2 O2 132.7 81.6
O2 C2 C3 H3 124.0 157.9
C3 C2 O2 C1 115.4 111.6
C3 C2 O2 H2 237.6 235.8
C1 C2 O2 H2 122.3 124.2
O2 C2 C1 O1 18.6 322.5
O2 C2 C1 H1 255.6 200.5
O4 C1 C2 O1 114.1 119.0
O4 C1 C2 H1 237.1 241.1
C1 C2 C3 H3 243.2 275.9
C3 C2 C1 O2 240.9 242.0
C3 C2 C1 H2 122.1 117.9
O2 C2 C1 H2 241.2 235.9
C1 C2 O2 HO2 64.6 61.4
O1 C1 C2 H1 123.0 122.1
C2 C1 O1 HO1 294.4 177.3
H2 C2 C3 H3 5.2 33.8
C3 C2 H2 O2 121.2 124.2
C3 C2 H2 C1 242.4 248.4
O2 C2 H2 C1 121.2 124.2
H2 C2 O2 HO2 302.3 297.2
H2 C2 C1 O1 137.4 86.6
H2 C2 C1 H1 14.4 324.6
HO2 O2 C2 C1 64.6 61.4
HO2 O2 C2 H2 302.3 297.2
O4 C1 O1 C2 245.6 244.2
O4 C1 O1 H1 122.9 122.1
O1 C1 C2 H2 137.4 86.6
C2 C1 O1 H1 237.3 237.9
O4 C1 H1 C2 120.2 115.7
O4 C1 H1 O1 240.1 237.9
H1 C1 C2 H2 14.4 324.6
C2 C1 H1 O1 119.9 122.1
H1 C1 O1 HO1 57.2 299.3
HO1 O1 C1 H1 57.2 299.3