PDB Chemical Component RHP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RHP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C13 |
C12 |
1.300 |
1.173 |
C13 |
H13 |
1.091 |
1.050 |
C12 |
C11 |
1.536 |
1.472 |
C11 |
N10 |
1.288 |
1.467 |
C11 |
H111 |
1.115 |
1.090 |
C11 |
H112 |
1.116 |
1.091 |
N10 |
C9 |
1.460 |
1.469 |
N10 |
H10 |
1.020 |
1.009 |
C9 |
C1 |
1.535 |
1.543 |
C9 |
C8 |
1.498 |
1.513 |
C9 |
H9 |
1.116 |
1.090 |
C1 |
C2 |
1.543 |
1.543 |
C1 |
H11 |
1.114 |
1.090 |
C1 |
H12 |
1.115 |
1.090 |
C2 |
C3 |
1.493 |
1.514 |
C2 |
H21 |
1.115 |
1.090 |
C2 |
H22 |
1.115 |
1.090 |
C3 |
C8 |
1.365 |
1.381 |
C3 |
C4 |
1.382 |
1.386 |
C8 |
C7 |
1.378 |
1.384 |
C7 |
C6 |
1.388 |
1.386 |
C7 |
H7 |
1.103 |
1.080 |
C4 |
C5 |
1.391 |
1.379 |
C4 |
H4 |
1.102 |
1.080 |
C5 |
C6 |
1.390 |
1.387 |
C5 |
H5 |
1.102 |
1.080 |
C6 |
O6 |
1.380 |
1.359 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for RHP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C12 |
C13 |
H13 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
125.8 |
180.0 |
C12 |
C11 |
N10 |
120.5 |
109.5 |
C12 |
C11 |
H111 |
108.3 |
109.5 |
C12 |
C11 |
H112 |
108.2 |
109.5 |
N10 |
C11 |
H111 |
108.3 |
109.5 |
N10 |
C11 |
H112 |
108.3 |
109.4 |
C11 |
N10 |
C9 |
119.0 |
106.8 |
C11 |
N10 |
H10 |
108.7 |
106.7 |
H111 |
C11 |
H112 |
101.6 |
109.4 |
C9 |
N10 |
H10 |
108.8 |
106.7 |
N10 |
C9 |
C1 |
112.5 |
110.3 |
N10 |
C9 |
C8 |
111.6 |
110.4 |
N10 |
C9 |
H9 |
103.8 |
110.2 |
C1 |
C9 |
C8 |
101.7 |
105.2 |
C1 |
C9 |
H9 |
113.3 |
110.3 |
C9 |
C1 |
C2 |
107.9 |
102.4 |
C9 |
C1 |
H11 |
112.8 |
110.8 |
C9 |
C1 |
H12 |
112.7 |
110.8 |
C8 |
C9 |
H9 |
114.2 |
110.3 |
C9 |
C8 |
C3 |
112.6 |
109.8 |
C9 |
C8 |
C7 |
126.5 |
130.3 |
C2 |
C1 |
H11 |
112.8 |
110.8 |
C2 |
C1 |
H12 |
112.8 |
110.8 |
C1 |
C2 |
C3 |
102.4 |
105.2 |
C1 |
C2 |
H21 |
114.9 |
110.3 |
C1 |
C2 |
H22 |
114.9 |
110.3 |
H11 |
C1 |
H12 |
97.7 |
110.9 |
C3 |
C2 |
H21 |
114.9 |
110.3 |
C3 |
C2 |
H22 |
114.8 |
110.3 |
C2 |
C3 |
C8 |
111.5 |
109.8 |
C2 |
C3 |
C4 |
126.6 |
130.3 |
H21 |
C2 |
H22 |
95.6 |
110.4 |
C8 |
C3 |
C4 |
121.9 |
119.9 |
C3 |
C8 |
C7 |
121.0 |
119.9 |
C3 |
C4 |
C5 |
117.9 |
120.3 |
C3 |
C4 |
H4 |
120.8 |
119.8 |
C8 |
C7 |
C6 |
118.2 |
120.2 |
C8 |
C7 |
H7 |
120.5 |
119.9 |
C6 |
C7 |
H7 |
121.2 |
119.9 |
C7 |
C6 |
C5 |
120.9 |
119.8 |
C7 |
C6 |
O6 |
118.9 |
120.1 |
C5 |
C4 |
H4 |
121.4 |
119.9 |
C4 |
C5 |
C6 |
120.2 |
119.9 |
C4 |
C5 |
H5 |
120.0 |
120.0 |
C6 |
C5 |
H5 |
119.8 |
120.1 |
C5 |
C6 |
O6 |
120.2 |
120.1 |
C6 |
O6 |
HO6 |
119.0 |
106.8 |
Torsion Angles for RHP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C12 |
C11 |
N10 |
183.9 |
20.2 |
C13 |
C12 |
C11 |
H111 |
309.2 |
260.1 |
C13 |
C12 |
C11 |
H112 |
58.6 |
140.2 |
H13 |
C13 |
C12 |
C11 |
336.4 |
116.4 |
C11 |
C12 |
C13 |
H13 |
336.4 |
116.4 |
N10 |
C11 |
C12 |
H111 |
234.7 |
120.1 |
N10 |
C11 |
C12 |
H112 |
125.3 |
240.0 |
C12 |
C11 |
N10 |
C9 |
180.3 |
180.0 |
C12 |
C11 |
N10 |
H10 |
55.1 |
66.2 |
H111 |
C11 |
C12 |
H112 |
250.6 |
119.9 |
C12 |
C11 |
N10 |
H111 |
125.3 |
239.9 |
C12 |
C11 |
N10 |
H112 |
234.7 |
120.0 |
H111 |
C11 |
N10 |
H112 |
109.4 |
240.1 |
C9 |
N10 |
C11 |
H10 |
125.2 |
113.8 |
C11 |
N10 |
C9 |
C1 |
233.1 |
210.0 |
C11 |
N10 |
C9 |
C8 |
119.5 |
94.2 |
C11 |
N10 |
C9 |
H9 |
356.0 |
332.1 |
C12 |
C11 |
H111 |
N10 |
227.8 |
120.1 |
C12 |
C11 |
H111 |
H112 |
113.9 |
240.1 |
N10 |
C11 |
H111 |
H112 |
246.1 |
120.0 |
H111 |
C11 |
N10 |
C9 |
55.0 |
300.1 |
H111 |
C11 |
N10 |
H10 |
289.8 |
186.2 |
C12 |
C11 |
H112 |
N10 |
132.2 |
239.9 |
C12 |
C11 |
H112 |
H111 |
246.1 |
119.9 |
N10 |
C11 |
H112 |
H111 |
113.9 |
240.0 |
H112 |
C11 |
N10 |
C9 |
305.6 |
60.0 |
H112 |
C11 |
N10 |
H10 |
180.4 |
306.2 |
C9 |
N10 |
C11 |
H111 |
55.0 |
300.1 |
C9 |
N10 |
C11 |
H112 |
305.6 |
60.0 |
C11 |
N10 |
C9 |
H10 |
234.8 |
246.1 |
C1 |
C9 |
N10 |
C8 |
113.6 |
115.8 |
C1 |
C9 |
N10 |
H9 |
237.1 |
237.9 |
N10 |
C9 |
C1 |
C2 |
221.5 |
267.3 |
N10 |
C9 |
C1 |
H11 |
346.8 |
149.1 |
N10 |
C9 |
C1 |
H12 |
96.2 |
25.5 |
C8 |
C9 |
N10 |
H9 |
123.5 |
122.1 |
N10 |
C9 |
C8 |
C3 |
133.0 |
101.8 |
N10 |
C9 |
C8 |
C7 |
311.9 |
282.1 |
H10 |
N10 |
C11 |
H111 |
289.8 |
186.2 |
H10 |
N10 |
C11 |
H112 |
180.4 |
306.2 |
C11 |
N10 |
H10 |
C9 |
131.0 |
113.9 |
H10 |
N10 |
C9 |
C1 |
358.3 |
323.8 |
H10 |
N10 |
C9 |
C8 |
244.7 |
208.0 |
H10 |
N10 |
C9 |
H9 |
121.2 |
85.9 |
C1 |
C9 |
N10 |
H10 |
358.3 |
323.8 |
N10 |
C9 |
C1 |
C8 |
240.5 |
241.0 |
N10 |
C9 |
C1 |
H9 |
117.4 |
122.0 |
C8 |
C9 |
C1 |
H9 |
236.9 |
241.1 |
C1 |
C9 |
C8 |
C3 |
12.8 |
342.8 |
C1 |
C9 |
C8 |
C7 |
191.7 |
163.1 |
C2 |
C1 |
C9 |
H11 |
234.7 |
118.2 |
C2 |
C1 |
C9 |
H12 |
125.2 |
241.8 |
C9 |
C1 |
C2 |
C3 |
18.5 |
333.7 |
C9 |
C1 |
C2 |
H21 |
143.8 |
214.7 |
C9 |
C1 |
C2 |
H22 |
253.3 |
92.6 |
H11 |
C1 |
C9 |
H12 |
250.5 |
123.6 |
C8 |
C9 |
N10 |
H10 |
244.7 |
208.0 |
N10 |
C9 |
C8 |
C1 |
120.2 |
119.0 |
N10 |
C9 |
C8 |
H9 |
242.7 |
237.9 |
C1 |
C9 |
C8 |
H9 |
122.5 |
119.0 |
C8 |
C9 |
C1 |
C2 |
341.0 |
26.3 |
C8 |
C9 |
C1 |
H11 |
106.3 |
268.1 |
C8 |
C9 |
C1 |
H12 |
215.7 |
144.6 |
C2 |
C3 |
C8 |
C9 |
358.7 |
0.0 |
C9 |
C8 |
C3 |
C4 |
179.5 |
180.0 |
C3 |
C8 |
C9 |
C7 |
181.1 |
179.7 |
C9 |
C8 |
C7 |
C6 |
180.7 |
180.3 |
C9 |
C8 |
C7 |
H7 |
0.7 |
0.1 |
H9 |
C9 |
N10 |
H10 |
121.2 |
85.9 |
N10 |
C9 |
H9 |
C1 |
237.6 |
237.9 |
N10 |
C9 |
H9 |
C8 |
121.7 |
122.2 |
C1 |
C9 |
H9 |
C8 |
244.1 |
244.2 |
H9 |
C9 |
C1 |
C2 |
104.1 |
145.3 |
H9 |
C9 |
C1 |
H11 |
229.4 |
27.1 |
H9 |
C9 |
C1 |
H12 |
338.8 |
263.5 |
H9 |
C9 |
C8 |
C3 |
250.3 |
223.8 |
H9 |
C9 |
C8 |
C7 |
69.2 |
44.1 |
C2 |
C1 |
C9 |
C8 |
341.0 |
26.3 |
C2 |
C1 |
C9 |
H9 |
104.1 |
145.3 |
C9 |
C1 |
C2 |
H11 |
125.3 |
241.8 |
C9 |
C1 |
C2 |
H12 |
234.8 |
118.2 |
H11 |
C1 |
C2 |
H12 |
109.5 |
236.4 |
C3 |
C2 |
C1 |
H21 |
234.7 |
119.0 |
C3 |
C2 |
C1 |
H22 |
125.2 |
241.1 |
C1 |
C2 |
C3 |
C8 |
349.2 |
17.2 |
C1 |
C2 |
C3 |
C4 |
168.4 |
197.2 |
H21 |
C2 |
C1 |
H22 |
250.5 |
122.1 |
H11 |
C1 |
C9 |
C8 |
106.3 |
268.1 |
H11 |
C1 |
C9 |
H9 |
229.4 |
27.1 |
C9 |
C1 |
H11 |
C2 |
237.4 |
112.9 |
C9 |
C1 |
H11 |
H12 |
118.7 |
236.5 |
C2 |
C1 |
H11 |
H12 |
241.2 |
123.6 |
H11 |
C1 |
C2 |
C3 |
253.2 |
91.8 |
H11 |
C1 |
C2 |
H21 |
18.5 |
332.9 |
H11 |
C1 |
C2 |
H22 |
128.0 |
210.7 |
H12 |
C1 |
C9 |
C8 |
215.7 |
144.6 |
H12 |
C1 |
C9 |
H9 |
338.8 |
263.5 |
C9 |
C1 |
H12 |
C2 |
122.5 |
247.0 |
C9 |
C1 |
H12 |
H11 |
241.3 |
123.5 |
C2 |
C1 |
H12 |
H11 |
118.8 |
236.5 |
H12 |
C1 |
C2 |
C3 |
143.7 |
215.4 |
H12 |
C1 |
C2 |
H21 |
269.0 |
96.5 |
H12 |
C1 |
C2 |
H22 |
18.5 |
334.3 |
C9 |
C8 |
C3 |
C2 |
358.7 |
0.0 |
C3 |
C2 |
C1 |
H11 |
253.2 |
91.8 |
C3 |
C2 |
C1 |
H12 |
143.7 |
215.4 |
C1 |
C2 |
C3 |
H21 |
125.3 |
241.1 |
C1 |
C2 |
C3 |
H22 |
234.8 |
118.9 |
H21 |
C2 |
C3 |
H22 |
109.5 |
237.8 |
C8 |
C3 |
C2 |
C4 |
180.8 |
179.9 |
C2 |
C3 |
C8 |
C7 |
179.7 |
179.7 |
C2 |
C3 |
C4 |
C5 |
180.6 |
179.9 |
C2 |
C3 |
C4 |
H4 |
0.6 |
0.0 |
H21 |
C2 |
C1 |
H11 |
18.5 |
332.9 |
H21 |
C2 |
C1 |
H12 |
269.0 |
96.5 |
C1 |
C2 |
H21 |
C3 |
241.5 |
115.7 |
C1 |
C2 |
H21 |
H22 |
120.8 |
237.9 |
C3 |
C2 |
H21 |
H22 |
239.2 |
122.2 |
H21 |
C2 |
C3 |
C8 |
224.0 |
136.1 |
H21 |
C2 |
C3 |
C4 |
43.1 |
316.1 |
H22 |
C2 |
C1 |
H11 |
128.0 |
210.7 |
H22 |
C2 |
C1 |
H12 |
18.5 |
334.3 |
C1 |
C2 |
H22 |
C3 |
118.4 |
244.3 |
C1 |
C2 |
H22 |
H21 |
239.2 |
122.1 |
C3 |
C2 |
H22 |
H21 |
120.8 |
237.8 |
H22 |
C2 |
C3 |
C8 |
114.4 |
258.3 |
H22 |
C2 |
C3 |
C4 |
293.6 |
78.3 |
C3 |
C8 |
C9 |
H9 |
250.3 |
223.8 |
C9 |
C8 |
C3 |
C7 |
179.0 |
180.3 |
C8 |
C3 |
C2 |
H21 |
224.0 |
136.1 |
C8 |
C3 |
C2 |
H22 |
114.4 |
258.3 |
C2 |
C3 |
C8 |
C4 |
179.2 |
180.0 |
C8 |
C3 |
C4 |
C5 |
359.7 |
360.0 |
C8 |
C3 |
C4 |
H4 |
179.7 |
180.1 |
C3 |
C8 |
C7 |
C6 |
359.5 |
0.6 |
C3 |
C8 |
C7 |
H7 |
179.5 |
180.4 |
C4 |
C3 |
C2 |
H21 |
43.1 |
316.1 |
C4 |
C3 |
C2 |
H22 |
293.6 |
78.3 |
C2 |
C3 |
C4 |
C8 |
180.9 |
179.9 |
C4 |
C3 |
C8 |
C7 |
0.5 |
359.7 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C3 |
C4 |
C5 |
C6 |
0.1 |
0.0 |
C3 |
C4 |
C5 |
H5 |
180.1 |
180.1 |
C7 |
C8 |
C9 |
H9 |
69.2 |
44.1 |
C9 |
C8 |
C7 |
C3 |
181.2 |
179.7 |
C7 |
C8 |
C3 |
C4 |
0.5 |
359.7 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.2 |
C8 |
C7 |
C6 |
C5 |
0.3 |
359.4 |
C8 |
C7 |
C6 |
O6 |
180.1 |
179.7 |
C8 |
C7 |
C6 |
H7 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
C7 |
359.9 |
0.2 |
C7 |
C6 |
C5 |
H5 |
179.9 |
180.2 |
C5 |
C6 |
C7 |
O6 |
180.2 |
179.7 |
C7 |
C6 |
O6 |
HO6 |
180.0 |
269.7 |
C8 |
C7 |
H7 |
C6 |
180.0 |
180.2 |
H7 |
C7 |
C6 |
C5 |
180.3 |
179.6 |
H7 |
C7 |
C6 |
O6 |
0.1 |
359.9 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
C4 |
359.9 |
0.2 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
O6 |
180.1 |
180.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
179.9 |
H4 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
H4 |
C4 |
C5 |
H5 |
0.1 |
360.0 |
C5 |
C6 |
C7 |
H7 |
180.3 |
179.6 |
C7 |
C6 |
C5 |
O6 |
179.8 |
180.3 |
C6 |
C5 |
C4 |
H4 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
O6 |
HO6 |
359.8 |
90.0 |
H5 |
C5 |
C4 |
H4 |
0.1 |
360.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
O6 |
0.1 |
359.9 |
O6 |
C6 |
C7 |
H7 |
0.1 |
359.9 |
C7 |
C6 |
O6 |
C5 |
180.2 |
179.7 |
O6 |
C6 |
C5 |
H5 |
0.1 |
359.9 |