PDB Chemical Component RFZ

Ideal Model

Chemical Description

Name 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole
Formula C12 H12 Cl2 N2 O4
Formal charge 0
Molecular weight 319.141 g/mol
Component type NON-POLYMER

Chemical features

Atom count 32
Chiral atom count 4
Chiral atoms C1' C4' C3' C2'
Bond count 34
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole
Systematic name (OpenEye OEToolkits) (2R,3R,4S,5R)-2-(5,6-dichlorobenzimidazol-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3cc(Cl)c(Cl)cc23
SMILES (CACTVS) OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3cc(Cl)c(Cl)cc23
Stereo SMILES (OpenEye) c1c2c(cc(c1Cl)Cl)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O
InChI descriptor InChI=1S/C12H12Cl2N2O4/c13-5-1-7-8(2-6(5)14)16(4-15-7)12-11(19)10(18)9(3-17)20-12/h1-2,4,9-12,17-19H,3H2/t9-,10-,11-,12-/m1/s1
InChIKey descriptor XHSQDZXAVJRBMX-DDHJBXDOSA-N

Status Information

Last modified 2011-06-04
Created 2007-10-19
Release status REL
Model PDB code 2RKP
Processing site PDBJ