PDB Chemical Component RER

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RER

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.501	1.530
C1	O5	1.334	1.429
C1	O1	1.579	1.429
C2	C3	1.521	1.532
C3	N3	1.539	1.469
C3	C3A	1.453	1.531
C3	C4	1.487	1.532
C4	O4	1.502	1.429
C4	C5	1.519	1.531
C5	O5	1.449	1.428
C5	C5A	1.515	1.530
C1	H1	1.100	1.090
C2	H21C	1.100	1.090
C2	H22C	1.100	1.090
O1	HO1	0.950	0.967
N3	H31N	1.000	1.009
N3	H32N	0.999	1.009
C3A	H3A1	1.100	1.090
C3A	H3A2	1.100	1.090
C3A	H3A3	1.100	1.089
C4	H4	1.100	1.090
O4	HO4	0.950	0.967
C5	H5	1.100	1.090
C5A	H5A1	1.101	1.090
C5A	H5A2	1.100	1.090
C5A	H5A3	1.100	1.089

Bond Angles for RER

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	123.5	109.4
C2	C1	O1	100.9	109.5
C1	C2	C3	108.9	109.2
C2	C1	H1	106.1	109.5
C1	C2	H21C	109.6	109.6
C1	C2	H22C	109.8	109.5
O5	C1	O1	108.8	109.5
C1	O5	C5	113.6	114.1
O5	C1	H1	97.8	109.5
O1	C1	H1	121.5	109.5
C1	O1	HO1	109.5	114.0
C2	C3	N3	105.1	109.5
C2	C3	C3A	115.4	109.5
C2	C3	C4	110.0	109.0
C3	C2	H21C	109.7	109.6
C3	C2	H22C	109.8	109.5
N3	C3	C3A	105.2	109.5
N3	C3	C4	107.2	109.6
C3	N3	H31N	109.5	111.0
C3	N3	H32N	109.5	111.0
C3A	C3	C4	113.1	109.6
C3	C3A	H3A1	109.5	109.4
C3	C3A	H3A2	109.5	109.4
C3	C3A	H3A3	109.4	109.5
C3	C4	O4	99.5	109.5
C3	C4	C5	110.8	109.2
C3	C4	H4	116.6	109.5
O4	C4	C5	114.0	109.5
O4	C4	H4	113.6	109.5
C4	O4	HO4	109.5	114.0
C4	C5	O5	105.6	109.4
C4	C5	C5A	115.5	109.5
C5	C4	H4	102.8	109.6
C4	C5	H5	107.1	109.4
O5	C5	C5A	106.4	109.5
O5	C5	H5	116.1	109.5
C5A	C5	H5	106.4	109.5
C5	C5A	H5A1	109.5	109.4
C5	C5A	H5A2	109.5	109.5
C5	C5A	H5A3	109.5	109.5
H21C	C2	H22C	109.1	109.5
H31N	N3	H32N	109.5	110.9
H3A1	C3A	H3A2	109.5	109.5
H3A1	C3A	H3A3	109.4	109.4
H3A2	C3A	H3A3	109.5	109.6
H5A1	C5A	H5A2	109.5	109.4
H5A1	C5A	H5A3	109.4	109.4
H5A2	C5A	H5A3	109.5	109.5

Torsion Angles for RER

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	O1	238.7	240.0
C2	C1	O5	C5	46.0	61.1
O5	C1	C2	H1	111.1	120.0
O1	C1	C2	H1	232.4	239.9
C2	C1	O1	HO1	27.7	180.0
C1	C2	C3	N3	157.0	176.9
C1	C2	C3	C3A	272.3	297.0
C1	C2	C3	C4	41.8	57.0
C3	C2	C1	H21C	240.0	240.0
C3	C2	C1	H22C	120.2	119.9
H21C	C2	C1	H22C	240.2	239.8
C2	C1	O5	O1	117.6	120.0
O5	C1	C2	C3	322.8	302.4
C2	C1	O5	H1	244.8	240.0
O5	C1	C2	H21C	82.8	62.4
O5	C1	C2	H22C	202.6	182.5
O1	C1	O5	H1	127.2	120.0
O5	C1	O1	HO1	158.8	299.9
C4	C5	O5	C1	304.3	298.9
C1	O5	C5	C5A	181.0	178.9
C1	O5	C5	H5	62.8	58.8
C2	C1	O1	O5	228.8	240.1
O1	C1	C2	C3	84.1	62.3
C2	C1	O1	H1	116.7	120.1
O1	C1	C2	H21C	204.0	182.3
O1	C1	C2	H22C	323.9	302.5
O1	C1	O5	C5	288.4	301.2
O5	C1	O1	H1	247.9	240.0
C3	C2	C1	O5	322.8	302.4
C3	C2	C1	O1	84.1	62.3
C3	C2	C1	H1	211.6	182.4
C1	C2	C3	H21C	120.0	120.0
C1	C2	C3	H22C	239.8	240.1
N3	C3	C2	C3A	244.6	239.8
N3	C3	C2	C4	115.1	119.9
C2	C3	N3	H31N	249.5	60.1
C2	C3	N3	H32N	9.5	183.9
C3A	C3	C2	C4	230.5	240.1
C2	C3	C3A	H3A1	72.5	69.7
C2	C3	C3A	H3A2	192.5	189.7
C2	C3	C3A	H3A3	312.5	309.8
C2	C3	C4	O4	60.0	62.9
C2	C3	C4	C5	299.7	303.1
C2	C3	C4	H4	182.6	183.0
H21C	C2	C3	H22C	119.8	120.2
C2	C3	N3	C3A	122.3	120.2
C2	C3	N3	C4	242.9	240.4
N3	C3	C2	H21C	37.0	56.9
N3	C3	C2	H22C	277.2	296.7
C3A	C3	N3	C4	120.6	120.3
N3	C3	C3A	H3A1	187.8	189.9
N3	C3	C3A	H3A2	307.8	309.9
N3	C3	C3A	H3A3	67.8	70.0
N3	C3	C4	O4	306.2	303.1
N3	C3	C4	C5	185.9	183.2
N3	C3	C4	H4	68.8	63.2
H31N	N3	C3	H32N	240.0	236.1
C2	C3	C3A	N3	244.7	239.8
C2	C3	C3A	C4	128.0	119.6
C3A	C3	C2	H21C	152.4	177.1
C3A	C3	C2	H22C	32.5	56.9
N3	C3	C3A	C4	243.3	239.8
C3A	C3	N3	H31N	127.2	299.9
C3A	C3	N3	H32N	247.2	63.7
C3A	C3	C4	O4	190.8	182.8
C3A	C3	C4	C5	70.5	63.0
C3A	C3	C4	H4	313.3	302.9
H3A1	C3A	C3	H3A2	240.0	240.0
H3A1	C3A	C3	H3A3	120.0	119.9
H3A2	C3A	C3	H3A3	240.0	239.9
C2	C3	C4	N3	113.8	119.9
C2	C3	C4	C3A	229.3	240.1
C4	C3	C2	H21C	281.8	297.0
C4	C3	C2	H22C	162.0	176.8
N3	C3	C4	C3A	115.5	120.2
C4	C3	N3	H31N	6.6	179.6
C4	C3	N3	H32N	126.6	303.5
C4	C3	C3A	H3A1	304.5	310.2
C4	C3	C3A	H3A2	64.5	70.1
C4	C3	C3A	H3A3	184.5	190.2
O4	C4	C3	C5	120.3	119.9
O4	C4	C3	H4	237.4	239.9
C3	C4	O4	HO4	65.0	179.9
C3	C4	C5	O5	65.4	57.6
C3	C4	C5	C5A	182.6	177.6
C5	C4	C3	H4	117.1	120.0
C3	C4	C5	H5	301.0	297.6
C3	C4	O4	C5	242.0	240.3
C3	C4	O4	H4	124.7	120.1
O4	C4	C5	O5	314.1	297.7
O4	C4	C5	C5A	71.4	57.7
C5	C4	O4	H4	242.7	239.8
O4	C4	C5	H5	189.7	177.7
C1	O5	C5	C4	304.3	298.9
C3	C4	C5	O4	111.2	119.9
C3	C4	C5	H4	234.6	240.0
O4	C4	C5	H4	123.4	120.2
C5	C4	O4	HO4	183.0	299.6
O5	C5	C4	C5A	242.8	240.0
O5	C5	C4	H5	124.4	120.0
C5A	C5	C4	H5	241.6	240.0
C4	C5	C5A	H5A1	161.9	60.0
C4	C5	C5A	H5A2	281.9	179.9
C4	C5	C5A	H5A3	41.9	300.0
C5	O5	C1	O1	288.4	301.2
C5	O5	C1	H1	161.3	181.1
C4	C5	O5	C5A	123.2	120.0
O5	C5	C4	H4	190.7	177.5
C4	C5	O5	H5	241.4	240.1
C5A	C5	O5	H5	118.2	120.1
O5	C5	C5A	H5A1	278.7	179.9
O5	C5	C5A	H5A2	38.7	299.9
O5	C5	C5A	H5A3	158.8	60.0
C4	C5	C5A	O5	243.2	240.0
C5A	C5	C4	H4	307.9	297.6
C4	C5	C5A	H5	118.8	120.0
O5	C5	C5A	H5	235.6	239.9
H5A1	C5A	C5	H5A2	240.0	240.0
H5A1	C5A	C5	H5A3	119.9	120.0
H5A2	C5A	C5	H5A3	239.9	239.9
C2	C1	H1	O5	128.2	119.9
C2	C1	H1	O1	246.0	239.9
H1	C1	C2	C3	211.6	182.4
H1	C1	C2	H21C	331.6	302.4
H1	C1	C2	H22C	91.4	62.6
O5	C1	H1	O1	117.7	120.0
H1	C1	O5	C5	161.3	181.1
H1	C1	O1	HO1	271.0	59.9
H21C	C2	C1	O5	82.8	62.4
H21C	C2	C1	O1	204.0	182.3
C1	C2	H21C	C3	240.5	240.3
H21C	C2	C1	H1	331.6	302.4
C1	C2	H21C	H22C	120.2	120.1
H21C	C2	C3	N3	37.0	56.9
H21C	C2	C3	C3A	152.4	177.1
H21C	C2	C3	C4	281.8	297.0
C3	C2	H21C	H22C	239.8	239.9
H22C	C2	C1	O5	202.6	182.5
H22C	C2	C1	O1	323.9	302.5
C1	C2	H22C	C3	119.7	119.7
H22C	C2	C1	H1	91.4	62.6
C1	C2	H22C	H21C	239.8	239.8
H22C	C2	C3	N3	277.2	296.7
H22C	C2	C3	C3A	32.5	56.9
H22C	C2	C3	C4	162.0	176.8
C3	C2	H22C	H21C	120.2	120.2
HO1	O1	C1	H1	271.0	59.9
H31N	N3	C3	C3A	127.2	299.9
H31N	N3	C3	C4	6.6	179.6
C3	N3	H31N	H32N	120.0	123.9
H32N	N3	C3	C3A	247.2	63.7
H32N	N3	C3	C4	126.6	303.5
C3	N3	H32N	H31N	239.9	236.1
H3A1	C3A	C3	C4	304.5	310.2
C3	C3A	H3A1	H3A2	120.0	119.9
C3	C3A	H3A1	H3A3	240.0	240.0
H3A2	C3A	H3A1	H3A3	120.0	120.1
H3A2	C3A	C3	C4	64.5	70.1
C3	C3A	H3A2	H3A1	239.9	240.1
C3	C3A	H3A2	H3A3	120.0	120.0
H3A1	C3A	H3A2	H3A3	240.0	240.0
H3A3	C3A	C3	C4	184.5	190.2
C3	C3A	H3A3	H3A1	120.0	119.9
C3	C3A	H3A3	H3A2	240.0	240.0
H3A1	C3A	H3A3	H3A2	120.0	120.0
C3	C4	H4	O4	245.2	239.9
C3	C4	H4	C5	121.5	119.8
O4	C4	H4	C5	236.3	239.9
H4	C4	O4	HO4	300.3	59.8
H4	C4	C5	O5	190.7	177.5
H4	C4	C5	C5A	307.9	297.6
H4	C4	C5	H5	66.3	57.6
HO4	O4	C4	C5	183.0	299.6
HO4	O4	C4	H4	300.3	59.8
C4	C5	H5	O5	117.8	119.9
C4	C5	H5	C5A	235.9	240.0
H5	C5	C4	H4	66.3	57.6
O5	C5	H5	C5A	118.2	120.1
H5	C5	C5A	H5A1	43.1	300.0
H5	C5	C5A	H5A2	163.1	60.0
H5	C5	C5A	H5A3	283.2	180.0
H5A1	C5A	C5	H5	43.1	300.0
C5	C5A	H5A1	H5A2	120.0	120.0
C5	C5A	H5A1	H5A3	240.0	240.0
H5A2	C5A	H5A1	H5A3	120.0	120.0
H5A2	C5A	C5	H5	163.1	60.0
C5	C5A	H5A2	H5A1	240.0	240.0
C5	C5A	H5A2	H5A3	120.0	120.1
H5A1	C5A	H5A2	H5A3	240.0	240.0
H5A3	C5A	C5	H5	283.2	180.0
C5	C5A	H5A3	H5A1	120.0	120.0
C5	C5A	H5A3	H5A2	240.0	239.9
H5A1	C5A	H5A3	H5A2	120.0	120.0