PDB Chemical Component RED

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for RED

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.237	1.208
C1	OXT	1.351	1.342
C1	C2	1.519	1.506
OXT	HO	0.949	0.967
C2	C3	1.533	1.529
C2	H22	1.115	1.090
C2	H21	1.115	1.089
C3	C4	1.531	1.530
C3	H32	1.116	1.090
C3	H31	1.114	1.090
C4	C5	1.526	1.528
C4	H42	1.114	1.089
C4	H41	1.115	1.090
C5	C6	1.534	1.530
C5	H52	1.116	1.090
C5	H51	1.115	1.090
C6	C7	1.531	1.529
C6	S6	1.794	1.814
C6	H6	1.116	1.090
C7	C8	1.517	1.530
C7	H72	1.114	1.089
C7	H71	1.115	1.090
C8	S8	1.796	1.813
C8	H82	1.115	1.090
C8	H81	1.115	1.090
S8	H8S	0.950	1.344
S6	H6S	0.950	1.344

Bond Angles for RED

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	OXT	122.1	120.0
O1	C1	C2	118.9	120.0
OXT	C1	C2	119.0	120.0
C1	OXT	HO	122.1	120.1
C1	C2	C3	112.1	109.5
C1	C2	H22	111.2	109.5
C1	C2	H21	111.2	109.5
C3	C2	H22	111.3	109.4
C3	C2	H21	111.3	109.5
C2	C3	C4	111.8	109.6
C2	C3	H32	111.3	109.5
C2	C3	H31	111.4	109.5
H22	C2	H21	99.1	109.4
C4	C3	H32	111.4	109.4
C4	C3	H31	111.4	109.5
C3	C4	C5	112.2	109.5
C3	C4	H42	111.2	109.4
C3	C4	H41	111.2	109.5
H32	C3	H31	99.0	109.4
C5	C4	H42	111.3	109.5
C5	C4	H41	111.2	109.5
C4	C5	C6	114.1	109.5
C4	C5	H52	110.5	109.5
C4	C5	H51	110.5	109.5
H42	C4	H41	99.1	109.4
C6	C5	H52	110.5	109.4
C6	C5	H51	110.5	109.5
C5	C6	C7	110.8	109.5
C5	C6	S6	115.0	109.4
C5	C6	H6	105.8	109.5
H52	C5	H51	99.8	109.4
C7	C6	S6	112.7	109.5
C7	C6	H6	108.4	109.5
C6	C7	C8	113.3	109.5
C6	C7	H72	110.8	109.5
C6	C7	H71	110.7	109.5
S6	C6	H6	103.5	109.5
C6	S6	H6S	115.0	100.0
C8	C7	H72	110.8	109.4
C8	C7	H71	110.8	109.5
C7	C8	S8	114.3	109.6
C7	C8	H82	110.4	109.4
C7	C8	H81	110.4	109.5
H72	C7	H71	99.5	109.4
S8	C8	H82	110.5	109.5
S8	C8	H81	110.5	109.5
C8	S8	H8S	114.3	100.0
H82	C8	H81	99.8	109.4

Torsion Angles for RED

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
OXT	C1	O1	C2	180.9	180.1
O1	C1	OXT	HO	180.0	359.9
O1	C1	C2	C3	322.7	0.1
O1	C1	C2	H22	87.9	120.0
O1	C1	C2	H21	197.4	240.0
O1	C1	OXT	C2	179.1	179.9
OXT	C1	C2	C3	141.8	180.0
OXT	C1	C2	H22	267.1	300.0
OXT	C1	C2	H21	16.6	59.9
O1	C1	C2	OXT	180.8	180.1
C2	C1	OXT	HO	0.9	180.0
C3	C2	C1	H22	234.8	240.0
C3	C2	C1	H21	125.3	120.1
C1	C2	C3	C4	284.6	180.0
C1	C2	C3	H32	49.8	300.0
C1	C2	C3	H31	159.3	59.9
H22	C2	C1	H21	250.5	240.1
HO	OXT	C1	C2	0.9	180.0
C1	C2	C3	H22	125.2	120.0
C1	C2	C3	H21	234.8	239.9
H22	C2	C3	H21	109.6	119.9
C4	C3	C2	H32	234.8	240.0
C4	C3	C2	H31	125.3	120.0
C2	C3	C4	C5	183.3	180.0
C2	C3	C4	H42	308.6	300.0
C2	C3	C4	H41	58.1	59.9
H32	C3	C2	H31	250.5	240.0
C1	C2	H22	C3	234.3	240.0
C1	C2	H22	H21	117.1	120.0
C3	C2	H22	H21	242.8	240.0
H22	C2	C3	C4	159.4	60.0
H22	C2	C3	H32	284.6	180.0
H22	C2	C3	H31	34.1	299.9
C1	C2	H21	C3	125.7	120.1
C1	C2	H21	H22	242.9	240.0
C3	C2	H21	H22	117.2	119.9
H21	C2	C3	C4	49.8	300.1
H21	C2	C3	H32	175.0	60.1
H21	C2	C3	H31	284.5	180.0
C4	C3	C2	H22	159.4	60.0
C4	C3	C2	H21	49.8	300.1
C2	C3	C4	H32	125.2	120.0
C2	C3	C4	H31	234.7	239.9
H32	C3	C4	H31	109.5	119.9
C5	C4	C3	H42	234.7	239.9
C5	C4	C3	H41	125.2	120.0
C3	C4	C5	C6	155.4	180.0
C3	C4	C5	H52	280.7	300.0
C3	C4	C5	H51	30.2	60.0
H42	C4	C3	H41	250.5	240.1
H32	C3	C2	H22	284.6	180.0
H32	C3	C2	H21	175.0	60.1
C2	C3	H32	C4	234.5	239.9
C2	C3	H32	H31	117.3	120.0
C4	C3	H32	H31	242.7	240.1
H32	C3	C4	C5	58.1	60.0
H32	C3	C4	H42	183.4	180.0
H32	C3	C4	H41	292.9	299.9
H31	C3	C2	H22	34.1	299.9
H31	C3	C2	H21	284.5	180.0
C2	C3	H31	C4	125.5	120.1
C2	C3	H31	H32	242.8	240.0
C4	C3	H31	H32	117.3	119.9
H31	C3	C4	C5	308.6	300.0
H31	C3	C4	H42	73.9	60.1
H31	C3	C4	H41	183.4	180.0
C5	C4	C3	H32	58.1	60.0
C5	C4	C3	H31	308.6	300.0
C3	C4	C5	H42	125.3	120.0
C3	C4	C5	H41	234.8	240.0
H42	C4	C5	H41	109.5	120.0
C6	C5	C4	H52	234.7	240.0
C6	C5	C4	H51	125.3	120.0
C4	C5	C6	C7	302.0	180.0
C4	C5	C6	S6	172.7	60.0
C4	C5	C6	H6	59.2	300.0
H52	C5	C4	H51	250.6	240.0
H42	C4	C3	H32	183.4	180.0
H42	C4	C3	H31	73.9	60.1
C3	C4	H42	C5	234.2	239.9
C3	C4	H42	H41	117.1	119.9
C5	C4	H42	H41	242.9	240.0
H42	C4	C5	C6	30.2	60.0
H42	C4	C5	H52	155.5	180.0
H42	C4	C5	H51	264.9	300.0
H41	C4	C3	H32	292.9	299.9
H41	C4	C3	H31	183.4	180.0
C3	C4	H41	C5	125.8	120.1
C3	C4	H41	H42	242.9	240.1
C5	C4	H41	H42	117.2	120.0
H41	C4	C5	C6	280.7	300.0
H41	C4	C5	H52	46.0	60.0
H41	C4	C5	H51	155.4	180.0
C6	C5	C4	H42	30.2	60.0
C6	C5	C4	H41	280.7	300.0
C4	C5	C6	H52	125.2	120.0
C4	C5	C6	H51	234.7	240.0
H52	C5	C6	H51	109.5	119.9
C7	C6	C5	S6	129.3	120.0
C7	C6	C5	H6	242.8	240.0
C5	C6	C7	C8	187.3	180.0
C5	C6	C7	H72	312.6	300.0
C5	C6	C7	H71	62.1	60.0
S6	C6	C5	H6	113.5	120.0
C5	C6	S6	H6S	180.1	60.1
H52	C5	C4	H42	155.5	180.0
H52	C5	C4	H41	46.0	60.0
C4	C5	H52	C6	232.7	239.9
C4	C5	H52	H51	116.3	120.0
C6	C5	H52	H51	243.6	240.1
H52	C5	C6	C7	176.7	60.0
H52	C5	C6	S6	47.5	299.9
H52	C5	C6	H6	293.9	180.0
H51	C5	C4	H42	264.9	300.0
H51	C5	C4	H41	155.4	180.0
C4	C5	H51	C6	127.3	120.1
C4	C5	H51	H52	243.7	240.0
C6	C5	H51	H52	116.4	119.9
H51	C5	C6	C7	67.2	300.0
H51	C5	C6	S6	298.0	180.0
H51	C5	C6	H6	184.4	60.0
C7	C6	C5	H52	176.7	60.0
C7	C6	C5	H51	67.2	300.0
C5	C6	C7	S6	229.6	240.0
C5	C6	C7	H6	115.6	120.0
S6	C6	C7	H6	246.0	240.0
C7	C6	S6	H6S	51.7	300.0
C8	C7	C6	H72	234.7	240.0
C8	C7	C6	H71	125.3	120.0
C6	C7	C8	S8	189.3	180.0
C6	C7	C8	H82	314.6	300.0
C6	C7	C8	H81	64.0	60.0
H72	C7	C6	H71	250.6	240.0
S6	C6	C5	H52	47.5	299.9
S6	C6	C5	H51	298.0	180.0
C5	C6	S6	C7	128.3	120.1
C5	C6	S6	H6	245.2	240.0
C7	C6	S6	H6	116.9	120.0
S6	C6	C7	C8	317.8	300.0
S6	C6	C7	H72	83.1	60.0
S6	C6	C7	H71	192.5	180.0
H6	C6	C5	H52	293.9	180.0
H6	C6	C5	H51	184.4	60.0
C5	C6	H6	C7	241.2	239.9
C5	C6	H6	S6	121.2	119.9
C7	C6	H6	S6	240.1	240.0
H6	C6	C7	C8	71.7	60.0
H6	C6	C7	H72	197.0	180.0
H6	C6	C7	H71	306.5	300.0
H6	C6	S6	H6S	294.9	180.0
C8	C7	C6	S6	317.8	300.0
C8	C7	C6	H6	71.7	60.0
C6	C7	C8	H72	125.3	120.1
C6	C7	C8	H71	234.8	240.0
H72	C7	C8	H71	109.5	119.9
S8	C8	C7	H82	234.7	240.0
S8	C8	C7	H81	125.3	120.1
C7	C8	S8	H8S	180.0	180.1
H82	C8	C7	H81	250.6	240.1
H72	C7	C6	S6	83.1	60.0
H72	C7	C6	H6	197.0	180.0
C6	C7	H72	C8	233.3	239.9
C6	C7	H72	H71	116.6	120.0
C8	C7	H72	H71	243.3	240.1
H72	C7	C8	S8	64.1	60.0
H72	C7	C8	H82	189.3	180.0
H72	C7	C8	H81	298.8	299.9
H71	C7	C6	S6	192.5	180.0
H71	C7	C6	H6	306.5	300.0
C6	C7	H71	C8	126.7	120.1
C6	C7	H71	H72	243.4	240.0
C8	C7	H71	H72	116.7	119.9
H71	C7	C8	S8	314.5	300.1
H71	C7	C8	H82	79.8	60.1
H71	C7	C8	H81	189.3	180.0
S8	C8	C7	H72	64.1	60.0
S8	C8	C7	H71	314.5	300.1
C7	C8	S8	H82	125.2	120.0
C7	C8	S8	H81	234.8	240.0
H82	C8	S8	H81	109.5	120.0
H82	C8	C7	H72	189.3	180.0
H82	C8	C7	H71	79.8	60.1
C7	C8	H82	S8	232.6	239.9
C7	C8	H82	H81	116.2	119.9
S8	C8	H82	H81	243.6	240.0
H82	C8	S8	H8S	54.7	60.1
H81	C8	C7	H72	298.8	299.9
H81	C8	C7	H71	189.3	180.0
C7	C8	H81	S8	127.4	120.1
C7	C8	H81	H82	243.8	240.1
S8	C8	H81	H82	116.4	120.0
H81	C8	S8	H8S	305.2	300.1
H8S	S8	C8	H82	54.7	60.1
H8S	S8	C8	H81	305.2	300.1
H6S	S6	C6	H6	294.9	180.0