PDB Chemical Component RCX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RCX
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O5 |
C4 |
1.331 |
1.345 |
| O5 |
C3 |
1.320 |
1.454 |
| O6 |
C4 |
1.403 |
1.216 |
| C4 |
C1 |
1.413 |
1.466 |
| C3 |
C2 |
1.405 |
1.510 |
| C1 |
C2 |
1.441 |
1.362 |
| C1 |
C7 |
1.561 |
1.480 |
| C2 |
C13 |
1.503 |
1.469 |
| C12 |
C7 |
1.395 |
1.395 |
| C12 |
C11 |
1.409 |
1.380 |
| C13 |
C18 |
1.378 |
1.400 |
| C13 |
C14 |
1.391 |
1.399 |
| C7 |
C8 |
1.392 |
1.395 |
| C18 |
C17 |
1.382 |
1.379 |
| C11 |
C10 |
1.390 |
1.384 |
| C14 |
C15 |
1.395 |
1.379 |
| C17 |
C16 |
1.389 |
1.384 |
| C8 |
C9 |
1.414 |
1.381 |
| C15 |
C16 |
1.389 |
1.384 |
| C16 |
S19 |
1.776 |
1.762 |
| C10 |
C9 |
1.390 |
1.383 |
| O20 |
S19 |
1.513 |
1.421 |
| S19 |
O21 |
1.516 |
1.421 |
| S19 |
C22 |
1.785 |
1.814 |
| C3 |
H2 |
1.100 |
1.089 |
| C8 |
H3 |
1.080 |
1.079 |
| C9 |
H4 |
1.080 |
1.080 |
| C10 |
H5 |
1.080 |
1.080 |
| C11 |
H6 |
1.080 |
1.080 |
| C12 |
H7 |
1.080 |
1.080 |
| C14 |
H8 |
1.080 |
1.081 |
| C15 |
H9 |
1.080 |
1.081 |
| C17 |
H10 |
1.080 |
1.080 |
| C18 |
H11 |
1.080 |
1.080 |
| C22 |
H12 |
1.100 |
1.090 |
| C22 |
H13 |
1.100 |
1.089 |
| C22 |
H14 |
1.100 |
1.090 |
| C3 |
H1 |
1.100 |
1.090 |
Bond Angles for RCX
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O5 |
C3 |
H2 |
109.6 |
110.1 |
| O5 |
C3 |
H1 |
109.6 |
110.1 |
| C4 |
C1 |
C7 |
126.7 |
125.6 |
| C3 |
C2 |
C13 |
124.4 |
126.8 |
| C2 |
C1 |
C7 |
129.2 |
125.5 |
| C1 |
C2 |
C13 |
129.3 |
126.7 |
| C1 |
C7 |
C8 |
121.2 |
120.1 |
| C2 |
C13 |
C18 |
116.3 |
120.2 |
| C2 |
C13 |
C14 |
123.1 |
120.2 |
| C12 |
C11 |
H6 |
119.9 |
119.9 |
| C14 |
C13 |
C18 |
120.6 |
119.6 |
| C13 |
C18 |
C17 |
120.1 |
119.8 |
| C13 |
C18 |
H11 |
119.9 |
120.1 |
| C13 |
C14 |
C15 |
119.4 |
119.8 |
| C13 |
C14 |
H8 |
120.3 |
120.1 |
| C7 |
C8 |
C9 |
120.6 |
119.9 |
| C7 |
C8 |
H3 |
119.7 |
120.1 |
| C18 |
C17 |
H10 |
120.0 |
119.9 |
| C11 |
C10 |
H5 |
120.6 |
119.8 |
| C14 |
C15 |
C16 |
119.8 |
120.2 |
| C15 |
C14 |
H8 |
120.3 |
120.1 |
| C14 |
C15 |
H9 |
120.1 |
119.9 |
| C17 |
C16 |
S19 |
117.0 |
119.8 |
| C9 |
C8 |
H3 |
119.7 |
120.1 |
| C8 |
C9 |
H4 |
119.6 |
119.9 |
| C15 |
C16 |
S19 |
122.9 |
119.8 |
| C16 |
C15 |
H9 |
120.1 |
119.9 |
| C16 |
S19 |
O21 |
107.4 |
104.2 |
| C16 |
S19 |
C22 |
111.6 |
104.5 |
| C10 |
C9 |
H4 |
119.6 |
120.0 |
| O20 |
S19 |
O21 |
110.7 |
121.1 |
| O20 |
S19 |
C22 |
108.6 |
110.5 |
| O21 |
S19 |
C22 |
108.7 |
110.6 |
| S19 |
C22 |
H12 |
109.5 |
109.5 |
| S19 |
C22 |
H13 |
109.5 |
109.5 |
| S19 |
C22 |
H14 |
109.5 |
109.5 |
| H2 |
C3 |
H1 |
109.5 |
110.1 |
| H12 |
C22 |
H13 |
109.5 |
109.4 |
| H12 |
C22 |
H14 |
109.5 |
109.5 |
| H13 |
C22 |
H14 |
109.5 |
109.4 |
Torsion Angles for RCX
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
O5 |
C3 |
H2 |
119.6 |
240.5 |
| C4 |
O5 |
C3 |
H1 |
239.7 |
119.0 |
| O5 |
C4 |
C1 |
C7 |
180.1 |
179.9 |
| O5 |
C3 |
C2 |
C13 |
179.1 |
180.0 |
| H2 |
C3 |
O5 |
H1 |
239.9 |
121.5 |
| O6 |
C4 |
C1 |
C7 |
0.6 |
0.2 |
| C2 |
C1 |
C4 |
C7 |
180.3 |
179.8 |
| C4 |
C1 |
C2 |
C13 |
181.0 |
180.2 |
| C4 |
C1 |
C7 |
C8 |
134.4 |
294.8 |
| C3 |
C2 |
C1 |
C7 |
179.7 |
180.0 |
| C1 |
C2 |
C3 |
C13 |
181.5 |
179.9 |
| C3 |
C2 |
C13 |
C18 |
322.2 |
294.9 |
| C3 |
C2 |
C13 |
C14 |
141.3 |
115.2 |
| C4 |
C1 |
C2 |
C7 |
179.7 |
180.2 |
| C3 |
C2 |
C1 |
C13 |
178.4 |
180.1 |
| C2 |
C1 |
C7 |
C8 |
314.1 |
115.0 |
| C1 |
C2 |
C13 |
C18 |
140.3 |
115.0 |
| C1 |
C2 |
C13 |
C14 |
319.4 |
295.2 |
| C7 |
C1 |
C2 |
C13 |
1.3 |
359.9 |
| C1 |
C7 |
C8 |
C9 |
180.8 |
180.0 |
| C1 |
C7 |
C8 |
H3 |
0.8 |
359.9 |
| C13 |
C2 |
C1 |
C7 |
1.3 |
359.9 |
| C14 |
C13 |
C2 |
C18 |
179.1 |
180.2 |
| C2 |
C13 |
C18 |
C17 |
180.1 |
179.7 |
| C2 |
C13 |
C18 |
H11 |
0.1 |
0.0 |
| C2 |
C13 |
C14 |
C15 |
180.4 |
180.0 |
| C2 |
C13 |
C14 |
H8 |
0.3 |
0.0 |
| C12 |
C7 |
C8 |
H3 |
179.4 |
180.3 |
| C12 |
C11 |
C10 |
H5 |
180.0 |
179.7 |
| C2 |
C13 |
C18 |
C14 |
179.1 |
180.2 |
| C18 |
C13 |
C14 |
C15 |
359.4 |
0.2 |
| C18 |
C13 |
C14 |
H8 |
179.4 |
180.2 |
| C13 |
C18 |
C17 |
H10 |
179.4 |
180.3 |
| C2 |
C13 |
C14 |
C18 |
180.9 |
179.8 |
| C14 |
C13 |
C18 |
C17 |
0.9 |
359.5 |
| C14 |
C13 |
C18 |
H11 |
180.9 |
179.8 |
| C13 |
C14 |
C15 |
C16 |
359.8 |
0.0 |
| C15 |
C14 |
C13 |
H8 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
H9 |
179.8 |
180.0 |
| C9 |
C8 |
C7 |
H3 |
180.0 |
180.1 |
| C7 |
C8 |
C9 |
H4 |
180.4 |
179.9 |
| C13 |
C18 |
C17 |
H11 |
180.0 |
180.3 |
| C18 |
C17 |
C16 |
S19 |
180.1 |
179.7 |
| C11 |
C10 |
C9 |
H4 |
179.9 |
180.1 |
| C15 |
C14 |
C13 |
C18 |
359.4 |
0.2 |
| C13 |
C14 |
C15 |
H8 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
S19 |
180.2 |
180.0 |
| C16 |
C15 |
C14 |
H9 |
180.0 |
180.0 |
| C13 |
C18 |
C17 |
C16 |
359.4 |
0.5 |
| C15 |
C16 |
C17 |
S19 |
179.8 |
180.0 |
| C17 |
C16 |
C15 |
H9 |
180.5 |
180.0 |
| C17 |
C16 |
S19 |
O21 |
333.9 |
153.9 |
| C17 |
C16 |
S19 |
C22 |
214.9 |
270.0 |
| C7 |
C8 |
C9 |
H3 |
180.0 |
179.9 |
| C10 |
C9 |
C8 |
H4 |
180.0 |
180.1 |
| C16 |
C15 |
C14 |
H8 |
179.9 |
180.0 |
| C14 |
C15 |
C16 |
H9 |
180.0 |
180.0 |
| C17 |
C16 |
C15 |
S19 |
180.2 |
180.0 |
| C15 |
C16 |
S19 |
O21 |
154.1 |
333.9 |
| C15 |
C16 |
S19 |
C22 |
35.2 |
90.0 |
| S19 |
C16 |
C15 |
H9 |
0.3 |
0.0 |
| O20 |
S19 |
C16 |
O21 |
120.5 |
232.1 |
| O20 |
S19 |
C16 |
C22 |
239.4 |
116.1 |
| O21 |
S19 |
C16 |
C22 |
118.9 |
243.9 |
| C16 |
S19 |
C22 |
H12 |
180.0 |
60.0 |
| C16 |
S19 |
C22 |
H13 |
300.0 |
180.0 |
| C16 |
S19 |
C22 |
H14 |
60.0 |
300.0 |
| C10 |
C9 |
C8 |
H3 |
180.3 |
180.1 |
| C8 |
C9 |
C10 |
H4 |
180.0 |
179.9 |
| C16 |
S19 |
O20 |
O21 |
241.6 |
116.7 |
| C16 |
S19 |
O20 |
C22 |
122.3 |
248.3 |
| O21 |
S19 |
O20 |
C22 |
240.8 |
131.6 |
| O20 |
S19 |
C22 |
H12 |
301.4 |
308.4 |
| O20 |
S19 |
C22 |
H13 |
61.4 |
68.4 |
| O20 |
S19 |
C22 |
H14 |
181.3 |
188.4 |
| C16 |
S19 |
O21 |
C22 |
239.2 |
111.7 |
| O20 |
S19 |
O21 |
C22 |
119.2 |
228.5 |
| O21 |
S19 |
C22 |
H12 |
61.8 |
171.6 |
| O21 |
S19 |
C22 |
H13 |
181.8 |
291.6 |
| O21 |
S19 |
C22 |
H14 |
301.8 |
51.6 |
| C16 |
S19 |
C22 |
O21 |
118.2 |
248.4 |
| O20 |
S19 |
C22 |
O21 |
239.5 |
136.8 |
| H12 |
C22 |
S19 |
H13 |
240.0 |
240.0 |
| H12 |
C22 |
S19 |
H14 |
120.0 |
120.0 |
| H13 |
C22 |
S19 |
H14 |
240.0 |
240.0 |
| O5 |
C3 |
H2 |
H1 |
120.2 |
238.4 |
| H2 |
C3 |
C2 |
C13 |
59.1 |
299.3 |
| C7 |
C8 |
H3 |
C9 |
180.0 |
180.1 |
| H3 |
C8 |
C9 |
H4 |
0.3 |
0.0 |
| H4 |
C9 |
C8 |
H3 |
0.3 |
0.0 |
| H5 |
C10 |
C9 |
H4 |
359.9 |
0.1 |
| H6 |
C11 |
C10 |
H5 |
0.0 |
0.0 |
| H7 |
C12 |
C11 |
H6 |
359.7 |
359.9 |
| H8 |
C14 |
C13 |
C18 |
179.4 |
180.2 |
| C13 |
C14 |
H8 |
C15 |
180.0 |
180.0 |
| H8 |
C14 |
C15 |
C16 |
179.9 |
180.0 |
| H8 |
C14 |
C15 |
H9 |
359.9 |
360.0 |
| C14 |
C15 |
H9 |
C16 |
180.0 |
180.0 |
| H9 |
C15 |
C14 |
H8 |
359.9 |
360.0 |
| H9 |
C15 |
C16 |
S19 |
0.3 |
0.0 |
| H10 |
C17 |
C16 |
S19 |
0.1 |
360.0 |
| C13 |
C18 |
H11 |
C17 |
180.0 |
179.7 |
| H11 |
C18 |
C17 |
H10 |
359.4 |
360.0 |
| S19 |
C22 |
H12 |
H13 |
120.0 |
120.0 |
| S19 |
C22 |
H12 |
H14 |
240.0 |
240.0 |
| H13 |
C22 |
H12 |
H14 |
120.0 |
119.9 |
| S19 |
C22 |
H13 |
H12 |
240.0 |
240.0 |
| S19 |
C22 |
H13 |
H14 |
120.0 |
120.0 |
| H12 |
C22 |
H13 |
H14 |
240.0 |
240.0 |
| S19 |
C22 |
H14 |
H12 |
120.0 |
120.1 |
| S19 |
C22 |
H14 |
H13 |
240.0 |
240.0 |
| H12 |
C22 |
H14 |
H13 |
120.0 |
119.9 |
| O5 |
C3 |
H1 |
H2 |
239.8 |
121.6 |
| H1 |
C3 |
C2 |
C13 |
299.0 |
60.8 |