PDB Chemical Component RBS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for RBS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O61 |
C10 |
1.224 |
1.229 |
C10 |
C11 |
1.539 |
1.520 |
C10 |
N11 |
1.344 |
1.403 |
C11 |
C51 |
1.549 |
1.487 |
C11 |
H111 |
1.100 |
1.095 |
C51 |
H511 |
1.100 |
1.085 |
C51 |
H512 |
1.100 |
1.085 |
N11 |
C9 |
1.383 |
1.395 |
N11 |
HN11 |
1.000 |
1.027 |
C9 |
C13 |
1.406 |
1.390 |
C9 |
C8 |
1.400 |
1.391 |
C8 |
C7 |
1.396 |
1.405 |
C8 |
H8 |
1.080 |
1.088 |
C13 |
C17 |
1.402 |
1.398 |
C13 |
H13 |
1.080 |
1.086 |
C17 |
C18 |
1.397 |
1.393 |
C17 |
H17 |
1.080 |
1.088 |
C18 |
C7 |
1.389 |
1.405 |
C18 |
N2 |
1.353 |
1.344 |
C7 |
C6 |
1.382 |
1.393 |
C6 |
N1 |
1.364 |
1.417 |
C6 |
N3 |
1.365 |
1.346 |
N3 |
C19 |
1.342 |
1.342 |
C19 |
N2 |
1.345 |
1.349 |
C19 |
H19 |
1.080 |
1.084 |
N1 |
C5 |
1.358 |
1.404 |
N1 |
HN1 |
1.000 |
1.012 |
C5 |
C20 |
1.395 |
1.398 |
C5 |
C4 |
1.391 |
1.398 |
C4 |
C3 |
1.389 |
1.396 |
C4 |
H4 |
1.080 |
1.087 |
C20 |
C21 |
1.395 |
1.395 |
C20 |
H20 |
1.080 |
1.087 |
C21 |
C22 |
1.392 |
1.395 |
C21 |
H21 |
1.079 |
1.086 |
C22 |
C3 |
1.390 |
1.394 |
C22 |
H22 |
1.080 |
1.086 |
C3 |
H3 |
1.080 |
1.086 |
Bond Angles for RBS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O61 |
C10 |
C11 |
120.7 |
120.6 |
O61 |
C10 |
N11 |
122.9 |
126.7 |
C11 |
C10 |
N11 |
116.4 |
112.7 |
C10 |
C11 |
C51 |
117.1 |
109.1 |
C10 |
C11 |
H111 |
107.0 |
107.9 |
C10 |
N11 |
C9 |
129.7 |
128.2 |
C10 |
N11 |
HN11 |
115.1 |
115.8 |
C51 |
C11 |
H111 |
107.0 |
110.3 |
C11 |
C51 |
H511 |
109.5 |
119.8 |
C11 |
C51 |
H512 |
109.5 |
120.9 |
H511 |
C51 |
H512 |
109.5 |
118.5 |
C9 |
N11 |
HN11 |
115.1 |
116.0 |
N11 |
C9 |
C13 |
118.0 |
120.1 |
N11 |
C9 |
C8 |
123.8 |
120.3 |
C8 |
C9 |
C13 |
118.2 |
119.6 |
C9 |
C13 |
C17 |
121.5 |
120.1 |
C9 |
C13 |
H13 |
119.2 |
120.7 |
C9 |
C8 |
C7 |
120.3 |
120.0 |
C9 |
C8 |
H8 |
119.9 |
118.8 |
C7 |
C8 |
H8 |
119.9 |
121.2 |
C8 |
C7 |
C18 |
121.1 |
121.0 |
C8 |
C7 |
C6 |
120.2 |
122.9 |
C17 |
C13 |
H13 |
119.2 |
119.2 |
C13 |
C17 |
C18 |
119.2 |
121.6 |
C13 |
C17 |
H17 |
120.4 |
118.7 |
C18 |
C17 |
H17 |
120.4 |
119.7 |
C17 |
C18 |
C7 |
119.7 |
117.8 |
C17 |
C18 |
N2 |
120.6 |
120.7 |
C7 |
C18 |
N2 |
119.6 |
121.5 |
C18 |
C7 |
C6 |
118.7 |
116.1 |
C18 |
N2 |
C19 |
121.0 |
116.7 |
C7 |
C6 |
N1 |
116.5 |
119.4 |
C7 |
C6 |
N3 |
119.4 |
123.9 |
N3 |
C6 |
N1 |
124.1 |
116.7 |
C6 |
N1 |
C5 |
128.5 |
132.4 |
C6 |
N1 |
HN1 |
115.8 |
113.3 |
C6 |
N3 |
C19 |
121.0 |
114.7 |
N3 |
C19 |
N2 |
120.3 |
127.1 |
N3 |
C19 |
H19 |
119.9 |
116.6 |
N2 |
C19 |
H19 |
119.8 |
116.3 |
C5 |
N1 |
HN1 |
115.8 |
114.3 |
N1 |
C5 |
C20 |
117.5 |
120.2 |
N1 |
C5 |
C4 |
122.9 |
120.2 |
C4 |
C5 |
C20 |
119.6 |
119.6 |
C5 |
C20 |
C21 |
120.1 |
120.2 |
C5 |
C20 |
H20 |
120.0 |
120.4 |
C5 |
C4 |
C3 |
120.0 |
120.2 |
C5 |
C4 |
H4 |
120.0 |
120.4 |
C3 |
C4 |
H4 |
120.0 |
119.4 |
C4 |
C3 |
C22 |
120.7 |
120.0 |
C4 |
C3 |
H3 |
119.7 |
120.0 |
C21 |
C20 |
H20 |
119.9 |
119.4 |
C20 |
C21 |
C22 |
120.2 |
120.0 |
C20 |
C21 |
H21 |
119.9 |
119.9 |
C22 |
C21 |
H21 |
119.9 |
120.0 |
C21 |
C22 |
C3 |
119.4 |
120.0 |
C21 |
C22 |
H22 |
120.3 |
120.0 |
C3 |
C22 |
H22 |
120.3 |
120.0 |
C22 |
C3 |
H3 |
119.6 |
120.0 |
Torsion Angles for RBS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
C10 |
O61 |
N11 |
176.8 |
180.4 |
O61 |
C10 |
C11 |
C51 |
267.3 |
59.5 |
O61 |
C10 |
C11 |
H111 |
147.3 |
299.6 |
O61 |
C10 |
N11 |
C9 |
1.6 |
0.4 |
O61 |
C10 |
N11 |
HN11 |
181.6 |
180.4 |
O61 |
C10 |
C11 |
N11 |
183.0 |
179.7 |
C11 |
C10 |
N11 |
C9 |
184.6 |
180.0 |
C11 |
C10 |
N11 |
HN11 |
4.6 |
0.1 |
C51 |
C11 |
C10 |
H111 |
120.0 |
119.9 |
C10 |
C11 |
C51 |
H511 |
29.6 |
180.0 |
C10 |
C11 |
C51 |
H512 |
149.6 |
10.2 |
O61 |
C10 |
N11 |
C11 |
177.0 |
180.4 |
N11 |
C10 |
C11 |
C51 |
84.4 |
239.8 |
N11 |
C10 |
C11 |
H111 |
324.3 |
120.0 |
C9 |
N11 |
C10 |
HN11 |
180.0 |
180.0 |
C10 |
N11 |
C9 |
C13 |
178.8 |
0.0 |
C10 |
N11 |
C9 |
C8 |
357.8 |
180.1 |
C51 |
C11 |
C10 |
N11 |
84.4 |
239.8 |
C10 |
C11 |
C51 |
H111 |
240.0 |
241.7 |
H511 |
C51 |
C11 |
H512 |
240.0 |
169.7 |
H111 |
C11 |
C10 |
N11 |
324.3 |
120.0 |
C10 |
C11 |
H111 |
C51 |
126.3 |
119.1 |
H111 |
C11 |
C51 |
H511 |
149.6 |
298.3 |
H111 |
C11 |
C51 |
H512 |
269.7 |
128.6 |
H511 |
C51 |
C11 |
H111 |
149.6 |
298.3 |
C11 |
C51 |
H511 |
H512 |
120.0 |
190.0 |
H512 |
C51 |
C11 |
H111 |
269.7 |
128.6 |
C11 |
C51 |
H512 |
H511 |
240.0 |
169.9 |
C10 |
N11 |
C9 |
HN11 |
180.0 |
180.0 |
C8 |
C9 |
N11 |
C13 |
179.0 |
180.1 |
N11 |
C9 |
C13 |
C17 |
179.9 |
180.0 |
N11 |
C9 |
C13 |
H13 |
359.9 |
0.1 |
N11 |
C9 |
C8 |
C7 |
180.3 |
180.0 |
N11 |
C9 |
C8 |
H8 |
0.3 |
359.9 |
C10 |
N11 |
HN11 |
C9 |
180.0 |
180.0 |
HN11 |
N11 |
C9 |
C13 |
358.8 |
180.0 |
HN11 |
N11 |
C9 |
C8 |
177.8 |
0.1 |
C13 |
C9 |
N11 |
HN11 |
358.8 |
180.0 |
N11 |
C9 |
C13 |
C8 |
179.1 |
180.1 |
C13 |
C9 |
C8 |
C7 |
359.3 |
0.0 |
C13 |
C9 |
C8 |
H8 |
179.3 |
180.0 |
C17 |
C13 |
C9 |
H13 |
180.0 |
180.0 |
C9 |
C13 |
C17 |
C18 |
0.1 |
0.0 |
C9 |
C13 |
C17 |
H17 |
180.0 |
180.0 |
C8 |
C9 |
N11 |
HN11 |
177.8 |
0.1 |
N11 |
C9 |
C8 |
C13 |
181.0 |
179.9 |
C8 |
C9 |
C13 |
C17 |
0.9 |
359.9 |
C8 |
C9 |
C13 |
H13 |
180.8 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
C18 |
359.6 |
0.0 |
C9 |
C8 |
C7 |
C6 |
180.2 |
180.0 |
C7 |
C8 |
C9 |
C13 |
359.3 |
0.0 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C17 |
C18 |
C7 |
C8 |
1.3 |
360.0 |
C8 |
C7 |
C18 |
N2 |
180.7 |
180.0 |
C18 |
C7 |
C8 |
C6 |
179.5 |
180.1 |
C8 |
C7 |
C6 |
N1 |
359.5 |
0.0 |
C8 |
C7 |
C6 |
N3 |
179.1 |
180.0 |
H8 |
C8 |
C9 |
C13 |
179.3 |
180.0 |
C9 |
C8 |
H8 |
C7 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
C18 |
179.6 |
180.0 |
H8 |
C8 |
C7 |
C6 |
0.2 |
360.0 |
C9 |
C13 |
C17 |
H13 |
180.0 |
180.0 |
C18 |
C17 |
C13 |
H17 |
180.0 |
180.0 |
C13 |
C17 |
C18 |
C7 |
358.8 |
0.0 |
C13 |
C17 |
C18 |
N2 |
179.4 |
180.0 |
C9 |
C13 |
H13 |
C17 |
180.0 |
180.0 |
H13 |
C13 |
C17 |
C18 |
180.1 |
180.0 |
H13 |
C13 |
C17 |
H17 |
0.1 |
360.0 |
C8 |
C7 |
C18 |
C17 |
1.3 |
360.0 |
C18 |
C17 |
C13 |
H13 |
180.1 |
180.0 |
C13 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
C7 |
C18 |
C17 |
N2 |
179.4 |
180.1 |
C17 |
C18 |
C7 |
C6 |
180.8 |
180.0 |
C17 |
C18 |
N2 |
C19 |
179.0 |
180.0 |
H17 |
C17 |
C13 |
H13 |
0.1 |
360.0 |
C13 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
H17 |
C17 |
C18 |
C7 |
178.9 |
180.0 |
H17 |
C17 |
C18 |
N2 |
359.5 |
360.0 |
C18 |
C7 |
C8 |
H8 |
179.6 |
180.0 |
C8 |
C7 |
C18 |
C6 |
180.5 |
180.0 |
C7 |
C18 |
C17 |
H17 |
178.9 |
180.0 |
C17 |
C18 |
C7 |
N2 |
180.6 |
179.9 |
C7 |
C18 |
N2 |
C19 |
359.6 |
359.9 |
C18 |
C7 |
C6 |
N1 |
180.0 |
180.0 |
C18 |
C7 |
C6 |
N3 |
359.7 |
360.0 |
N2 |
C18 |
C17 |
H17 |
359.5 |
360.0 |
C17 |
C18 |
N2 |
C7 |
179.4 |
180.1 |
N2 |
C18 |
C7 |
C6 |
0.2 |
0.1 |
N3 |
C19 |
N2 |
C18 |
0.8 |
0.0 |
C18 |
N2 |
C19 |
H19 |
180.8 |
180.1 |
C6 |
C7 |
C8 |
H8 |
0.2 |
360.0 |
C8 |
C7 |
C6 |
C18 |
179.5 |
180.1 |
C6 |
C7 |
C18 |
N2 |
0.2 |
0.1 |
N3 |
C6 |
C7 |
N1 |
179.6 |
180.0 |
C7 |
C6 |
N1 |
C5 |
179.6 |
210.1 |
C7 |
C6 |
N1 |
HN1 |
359.6 |
29.9 |
C7 |
C6 |
N3 |
C19 |
0.7 |
360.0 |
C7 |
C6 |
N1 |
N3 |
179.6 |
180.0 |
N1 |
C6 |
N3 |
C19 |
180.3 |
180.0 |
C5 |
N1 |
C6 |
HN1 |
180.0 |
180.1 |
C6 |
N1 |
C5 |
C20 |
180.8 |
209.9 |
C6 |
N1 |
C5 |
C4 |
0.3 |
29.9 |
C7 |
C6 |
N3 |
N1 |
180.4 |
180.0 |
N3 |
C6 |
N1 |
C5 |
360.0 |
30.1 |
N3 |
C6 |
N1 |
HN1 |
180.0 |
210.0 |
C6 |
N3 |
C19 |
N2 |
359.0 |
0.0 |
C6 |
N3 |
C19 |
H19 |
179.0 |
180.0 |
C18 |
N2 |
C19 |
N3 |
0.8 |
0.0 |
C19 |
N3 |
C6 |
N1 |
180.3 |
180.0 |
N2 |
C19 |
N3 |
H19 |
180.0 |
180.0 |
N3 |
C19 |
N2 |
H19 |
180.0 |
180.0 |
N3 |
C19 |
H19 |
N2 |
180.0 |
180.0 |
C6 |
N1 |
C5 |
HN1 |
180.0 |
179.9 |
C4 |
C5 |
N1 |
C20 |
179.5 |
180.0 |
N1 |
C5 |
C20 |
C21 |
180.0 |
180.0 |
N1 |
C5 |
C20 |
H20 |
359.9 |
360.0 |
N1 |
C5 |
C4 |
C3 |
179.8 |
180.0 |
N1 |
C5 |
C4 |
H4 |
359.8 |
360.0 |
C6 |
N1 |
HN1 |
C5 |
180.0 |
180.1 |
HN1 |
N1 |
C5 |
C20 |
0.8 |
30.1 |
HN1 |
N1 |
C5 |
C4 |
180.3 |
210.0 |
C20 |
C5 |
N1 |
HN1 |
0.8 |
30.1 |
N1 |
C5 |
C20 |
C4 |
179.5 |
180.0 |
C20 |
C5 |
C4 |
C3 |
359.3 |
0.0 |
C20 |
C5 |
C4 |
H4 |
179.2 |
180.0 |
C21 |
C20 |
C5 |
H20 |
180.0 |
180.0 |
C5 |
C20 |
C21 |
C22 |
0.1 |
360.0 |
C5 |
C20 |
C21 |
H21 |
180.1 |
180.0 |
C4 |
C5 |
N1 |
HN1 |
180.3 |
210.0 |
N1 |
C5 |
C4 |
C20 |
180.5 |
180.0 |
C4 |
C5 |
C20 |
C21 |
0.5 |
360.0 |
C4 |
C5 |
C20 |
H20 |
180.4 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
C22 |
0.4 |
360.0 |
C5 |
C4 |
C3 |
H3 |
180.4 |
179.9 |
C3 |
C4 |
C5 |
C20 |
359.3 |
0.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C21 |
C22 |
C3 |
C4 |
0.1 |
360.0 |
C4 |
C3 |
C22 |
H22 |
180.1 |
180.0 |
C22 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
H4 |
C4 |
C5 |
C20 |
179.2 |
180.0 |
C5 |
C4 |
H4 |
C3 |
180.0 |
180.1 |
H4 |
C4 |
C3 |
C22 |
180.5 |
180.0 |
H4 |
C4 |
C3 |
H3 |
0.5 |
360.0 |
C5 |
C20 |
C21 |
H20 |
180.0 |
180.0 |
C22 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
C3 |
359.6 |
0.0 |
C20 |
C21 |
C22 |
H22 |
179.6 |
180.0 |
C5 |
C20 |
H20 |
C21 |
180.0 |
180.0 |
H20 |
C20 |
C21 |
C22 |
180.1 |
180.0 |
H20 |
C20 |
C21 |
H21 |
0.1 |
0.0 |
C4 |
C3 |
C22 |
C21 |
0.1 |
360.0 |
C22 |
C21 |
C20 |
H20 |
180.1 |
180.0 |
C20 |
C21 |
C22 |
H21 |
180.0 |
180.0 |
C3 |
C22 |
C21 |
H22 |
180.0 |
180.0 |
C21 |
C22 |
C3 |
H3 |
180.1 |
180.1 |
H21 |
C21 |
C20 |
H20 |
0.1 |
0.0 |
C20 |
C21 |
H21 |
C22 |
180.0 |
180.0 |
H21 |
C21 |
C22 |
C3 |
179.6 |
180.0 |
H21 |
C21 |
C22 |
H22 |
359.6 |
360.0 |
C22 |
C3 |
C4 |
H4 |
180.5 |
180.0 |
C4 |
C3 |
C22 |
H3 |
180.0 |
179.9 |
C3 |
C22 |
C21 |
H21 |
179.6 |
180.0 |
C21 |
C22 |
C3 |
H22 |
180.0 |
180.0 |
H22 |
C22 |
C21 |
H21 |
359.6 |
360.0 |
C21 |
C22 |
H22 |
C3 |
180.0 |
180.0 |
H22 |
C22 |
C3 |
H3 |
0.1 |
0.1 |
H3 |
C3 |
C4 |
H4 |
0.5 |
360.0 |
C4 |
C3 |
H3 |
C22 |
180.0 |
180.1 |
H3 |
C3 |
C22 |
H22 |
0.1 |
0.1 |