PDB Chemical Component R82

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for R82

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O2 1.452 1.429
O2 C3 1.395 1.360
C3 C4 1.403 1.386
C3 C10 1.442 1.392
C4 C5 1.404 1.387
C5 O6 1.412 1.360
C5 C8 1.430 1.387
O6 C7 1.455 1.429
C8 C9 1.443 1.382
C8 S15 1.797 1.762
C9 C10 1.393 1.386
C10 N11 1.449 1.403
N11 C12 1.353 1.348
C12 O13 1.222 1.213
C12 C14 1.502 1.507
S15 O16 1.441 1.421
S15 O17 1.422 1.421
S15 N18 1.657 1.655
N18 C19 1.493 1.465
N18 C27 1.409 1.396
C19 C20 1.533 1.530
C19 C21 1.556 1.538
C21 C22 1.542 1.512
C22 C23 1.401 1.381
C22 C27 1.418 1.387
C23 C24 1.406 1.382
C24 C25 1.397 1.383
C25 C26 1.363 1.378
C26 C27 1.425 1.396
C1 H11C 1.100 1.090
C1 H12C 1.100 1.090
C1 H13C 1.100 1.091
C4 H4 1.080 1.080
C7 H71C 1.100 1.090
C7 H72C 1.100 1.091
C7 H73C 1.100 1.090
C9 H9 1.080 1.080
N11 H11 1.000 0.970
C14 H141 1.100 1.090
C14 H142 1.100 1.090
C14 H143 1.100 1.090
C19 H19 1.100 1.090
C20 H201 1.100 1.090
C20 H202 1.100 1.091
C20 H203 1.100 1.090
C21 H211 1.100 1.090
C21 H212 1.100 1.091
C23 H23 1.080 1.080
C24 H24 1.079 1.081
C25 H25 1.080 1.080
C26 H26 1.080 1.080

Bond Angles for R82

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 O2 C3 116.0 117.0
O2 C1 H11C 109.5 109.5
O2 C1 H12C 109.5 109.5
O2 C1 H13C 109.5 109.5
O2 C3 C4 120.5 120.0
O2 C3 C10 118.1 120.1
C4 C3 C10 121.4 119.9
C3 C4 C5 120.8 119.9
C3 C4 H4 119.6 120.0
C3 C10 C9 118.8 120.0
C3 C10 N11 119.6 120.0
C4 C5 O6 120.1 119.9
C4 C5 C8 118.1 120.1
C5 C4 H4 119.6 120.0
O6 C5 C8 121.8 120.0
C5 O6 C7 119.5 117.0
C5 C8 C9 121.5 120.1
C5 C8 S15 122.1 120.0
O6 C7 H71C 109.5 109.5
O6 C7 H72C 109.5 109.5
O6 C7 H73C 109.4 109.5
C9 C8 S15 116.2 119.9
C8 C9 C10 119.3 120.0
C8 C9 H9 120.4 119.9
C8 S15 O16 110.3 106.4
C8 S15 O17 102.6 106.4
C8 S15 N18 99.6 107.2
C9 C10 N11 121.4 120.0
C10 C9 H9 120.3 120.0
C10 N11 C12 125.4 120.0
C10 N11 H11 117.3 120.0
N11 C12 O13 122.2 120.0
N11 C12 C14 117.3 120.0
C12 N11 H11 117.3 120.0
O13 C12 C14 120.5 120.0
C12 C14 H141 109.5 109.5
C12 C14 H142 109.4 109.5
C12 C14 H143 109.4 109.5
O16 S15 O17 126.6 123.1
O16 S15 N18 110.1 106.4
O17 S15 N18 104.2 106.4
S15 N18 C19 123.6 125.0
S15 N18 C27 123.9 124.9
C19 N18 C27 110.8 110.1
N18 C19 C20 115.8 110.3
N18 C19 C21 101.2 105.2
N18 C19 H19 108.4 110.3
N18 C27 C22 108.8 111.6
N18 C27 C26 132.6 129.4
C20 C19 C21 115.5 110.3
C20 C19 H19 107.9 110.3
C19 C20 H201 109.5 109.5
C19 C20 H202 109.5 109.5
C19 C20 H203 109.5 109.5
C19 C21 C22 104.4 104.6
C21 C19 H19 107.6 110.4
C19 C21 H211 110.7 110.4
C19 C21 H212 110.7 110.4
C21 C22 C23 132.1 131.0
C21 C22 C27 108.0 108.5
C22 C21 H211 110.7 110.5
C22 C21 H212 110.7 110.4
C23 C22 C27 119.9 120.5
C22 C23 C24 119.9 120.1
C22 C23 H23 120.1 119.9
C22 C27 C26 118.5 119.0
C23 C24 C25 119.9 119.9
C24 C23 H23 120.0 120.0
C23 C24 H24 120.0 120.1
C24 C25 C26 120.8 120.2
C25 C24 H24 120.0 120.1
C24 C25 H25 119.6 119.9
C25 C26 C27 120.9 120.3
C26 C25 H25 119.6 119.9
C25 C26 H26 119.5 119.9
C27 C26 H26 119.6 119.8
H11C C1 H12C 109.5 109.5
H11C C1 H13C 109.5 109.4
H12C C1 H13C 109.4 109.5
H71C C7 H72C 109.5 109.4
H71C C7 H73C 109.5 109.5
H72C C7 H73C 109.5 109.4
H141 C14 H142 109.5 109.4
H141 C14 H143 109.5 109.4
H142 C14 H143 109.5 109.5
H201 C20 H202 109.4 109.5
H201 C20 H203 109.5 109.5
H202 C20 H203 109.5 109.5
H211 C21 H212 109.5 110.4

Torsion Angles for R82

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 O2 C3 C4 11.0 359.9
C1 O2 C3 C10 190.6 179.7
H11C C1 O2 H12C 240.0 240.0
H11C C1 O2 H13C 120.0 119.9
H12C C1 O2 H13C 240.0 240.0
C3 O2 C1 H11C 180.0 300.0
C3 O2 C1 H12C 300.0 60.0
C3 O2 C1 H13C 60.0 180.0
C4 C3 O2 C10 180.4 180.2
O2 C3 C4 C5 177.0 180.0
O2 C3 C4 H4 357.0 0.0
O2 C3 C10 C9 183.6 179.7
O2 C3 C10 N11 359.2 360.0
O2 C3 C4 C10 179.6 179.8
C4 C3 C10 C9 3.2 359.5
C4 C3 C10 N11 178.8 179.8
C3 C4 C5 O6 179.4 180.0
C3 C4 C5 C8 2.3 360.0
C5 C4 C3 H4 180.0 180.0
O2 C3 C10 C4 180.4 180.2
C10 C3 C4 C5 357.4 0.2
C10 C3 C4 H4 177.4 180.2
C8 C9 C10 C3 356.5 0.5
C9 C10 C3 N11 184.4 179.7
C3 C10 C9 H9 176.6 180.3
C3 C10 N11 C12 157.7 213.8
C3 C10 N11 H11 337.7 33.8
C5 C4 C3 C10 357.4 0.2
C3 C4 C5 H4 180.0 180.0
O6 C5 C4 C8 177.2 180.0
C4 C5 O6 C7 8.5 354.9
C4 C5 C8 C9 357.3 0.0
C4 C5 C8 S15 183.0 180.0
C4 C5 O6 C8 183.0 180.0
O6 C5 C4 H4 359.5 0.0
O6 C5 C8 C9 180.2 180.0
O6 C5 C8 S15 5.9 0.0
C5 O6 C7 H71C 180.0 300.1
C5 O6 C7 H72C 300.0 60.0
C5 O6 C7 H73C 60.0 180.0
C4 C5 C8 O6 177.1 180.0
C8 C5 C4 H4 182.3 180.0
C8 C5 O6 C7 185.6 174.9
C9 C8 C5 S15 174.3 180.0
C5 C8 C9 C10 3.4 359.7
C5 C8 C9 H9 183.3 180.0
C5 C8 S15 O16 301.2 47.6
C5 C8 S15 O17 164.0 180.5
C5 C8 S15 N18 57.0 294.1
C7 O6 C5 C8 185.6 174.9
H71C C7 O6 H72C 240.0 240.0
H71C C7 O6 H73C 120.0 120.1
H72C C7 O6 H73C 240.0 240.1
C3 C10 C9 C8 356.5 0.5
C5 C8 C9 S15 185.4 180.0
C9 C8 S15 O16 126.7 227.6
C9 C8 S15 O17 349.4 0.5
C9 C8 S15 N18 242.4 114.1
C8 C9 C10 N11 181.0 180.3
C10 C9 C8 H9 180.0 179.7
C5 C8 S15 C9 174.6 180.0
S15 C8 C9 C10 178.0 179.7
S15 C8 C9 H9 358.0 360.0
O16 S15 C8 O17 137.2 227.1
O16 S15 C8 N18 244.3 113.6
O17 S15 C8 N18 107.0 246.5
C8 S15 N18 C19 242.4 276.5
C8 S15 N18 C27 46.4 96.2
C3 C10 C9 N11 175.5 180.3
C10 C9 C8 S15 178.0 179.7
C8 C9 C10 H9 180.0 180.3
C9 C10 N11 C12 333.2 34.0
C9 C10 N11 H11 153.2 214.0
C3 C10 N11 C9 184.5 179.7
N11 C10 C9 H9 1.0 360.0
C10 N11 C12 O13 357.8 355.2
C10 N11 C12 C14 176.6 175.1
C12 N11 C10 H11 180.0 180.0
C10 N11 C12 H11 180.0 180.0
O13 C12 N11 C14 181.3 180.1
N11 C12 C14 H141 181.2 0.0
N11 C12 C14 H142 301.2 120.0
N11 C12 C14 H143 61.2 240.1
N11 C12 O13 C14 178.7 179.9
O13 C12 N11 H11 177.8 175.2
O13 C12 C14 H141 360.0 180.0
O13 C12 C14 H142 120.0 299.9
O13 C12 C14 H143 240.0 60.0
N11 C12 C14 O13 181.3 180.1
C14 C12 N11 H11 356.6 355.1
H141 C14 C12 H142 240.0 240.0
H141 C14 C12 H143 120.0 120.0
H142 C14 C12 H143 240.0 239.9
C8 S15 O16 O17 235.6 123.0
C8 S15 O16 N18 109.0 245.9
O17 S15 O16 N18 233.4 122.9
O16 S15 N18 C19 358.3 162.9
O16 S15 N18 C27 162.3 342.6
C8 S15 O17 O16 127.5 237.0
C8 S15 O17 N18 256.5 114.1
O16 S15 O17 N18 129.0 237.1
O17 S15 N18 C19 136.7 30.0
O17 S15 N18 C27 300.7 209.8
C8 S15 N18 O16 244.1 113.6
C8 S15 N18 O17 105.7 246.4
O16 S15 N18 O17 221.7 132.9
C19 N18 S15 C27 196.0 180.3
S15 N18 C19 C20 264.8 298.9
S15 N18 C19 C21 139.2 180.0
S15 N18 C19 H19 26.2 61.0
S15 N18 C27 C22 215.2 179.8
S15 N18 C27 C26 30.5 0.7
S15 N18 C19 C27 165.8 179.7
C19 N18 C27 C22 21.0 359.6
C19 N18 C27 C26 196.2 180.5
C20 C19 N18 C21 125.6 118.9
C20 C19 N18 H19 238.6 237.9
N18 C19 C20 H201 180.0 65.7
N18 C19 C20 H202 300.0 185.7
N18 C19 C20 H203 60.0 305.7
N18 C19 C21 C22 21.7 360.0
C21 C19 N18 H19 113.0 119.0
N18 C19 C21 H211 140.9 118.8
N18 C19 C21 H212 262.5 241.2
S15 N18 C27 C19 194.2 180.3
C27 N18 C19 C20 99.0 119.2
C27 N18 C19 C21 333.4 0.3
C27 N18 C19 H19 220.4 241.3
C21 C22 C27 N18 354.7 0.4
C23 C22 C27 N18 176.1 180.3
C22 C27 N18 C26 184.7 179.1
C25 C26 C27 N18 186.1 179.6
N18 C27 C26 H26 6.1 359.3
C20 C19 N18 C27 99.0 119.2
N18 C19 C20 C21 242.0 244.2
N18 C19 C20 H19 121.6 122.1
C20 C19 C21 C22 255.8 241.0
C21 C19 C20 H19 239.6 237.8
C20 C19 C21 H211 15.0 359.9
C20 C19 C21 H212 136.6 122.3
H201 C20 C19 H202 240.0 240.0
H201 C20 C19 H203 120.0 120.0
H202 C20 C19 H203 240.0 240.0
C21 C19 N18 C27 333.4 0.3
N18 C19 C21 C20 125.8 118.9
N18 C19 C21 H19 246.4 241.0
C20 C19 C21 H19 120.6 122.1
C21 C19 C20 H201 298.0 181.5
C21 C19 C20 H202 58.0 301.5
C21 C19 C20 H203 178.0 61.5
C19 C21 C22 C23 167.3 180.0
C19 C21 C22 C27 349.0 359.8
C22 C21 C19 H211 240.8 241.2
C22 C21 C19 H212 119.2 118.8
H211 C21 C19 H212 238.4 237.6
N18 C27 C22 C21 354.7 0.4
C22 C21 C19 H19 135.3 118.9
C19 C21 C22 H211 119.2 118.8
C19 C21 C22 H212 240.8 241.3
C23 C22 C21 C27 178.4 180.2
C21 C22 C23 C24 180.6 180.0
C21 C22 C23 H23 0.7 0.1
C21 C22 C27 C26 178.7 179.6
H211 C21 C22 H212 121.6 122.5
N18 C27 C22 C23 176.1 180.3
C21 C22 C23 C27 181.8 179.8
C23 C22 C21 H211 48.1 61.2
C23 C22 C21 H212 286.5 298.7
C23 C22 C27 C26 0.0 359.4
C22 C23 C24 C25 1.3 0.1
C24 C23 C22 H23 180.0 179.9
C22 C23 C24 H24 181.3 180.0
N18 C27 C22 C26 176.0 180.8
C21 C22 C27 C23 178.6 180.2
C27 C22 C21 H211 229.7 241.0
C27 C22 C21 H212 108.2 118.5
C27 C22 C23 C24 358.9 0.2
C27 C22 C23 H23 178.9 180.3
C25 C26 C27 C22 1.0 0.6
C22 C27 C26 H26 180.9 180.3
C24 C23 C22 C27 358.9 0.2
C22 C23 C24 H23 180.0 180.1
C23 C24 C25 C26 359.7 360.0
C25 C24 C23 H24 180.0 180.1
C23 C24 C25 H25 179.7 180.0
C25 C24 C23 H23 181.3 180.0
C23 C24 C25 H24 180.0 179.9
C24 C25 C26 C27 359.2 359.7
C26 C25 C24 H25 180.0 180.0
C24 C25 C26 H26 179.2 180.0
N18 C27 C26 C25 186.1 179.6
C22 C27 C26 C25 1.0 0.6
C26 C25 C24 H24 179.7 180.1
C24 C25 C26 H25 180.0 180.0
C27 C26 C25 H26 180.0 179.7
N18 C27 C26 C22 185.1 179.0
C27 C26 C25 H25 179.2 179.7
C25 C26 C27 H26 180.0 180.3
H11C C1 O2 C3 180.0 300.0
O2 C1 H11C H12C 120.0 120.0
O2 C1 H11C H13C 240.0 240.0
H12C C1 H11C H13C 119.9 120.0
H12C C1 O2 C3 300.0 60.0
O2 C1 H12C H11C 239.9 240.0
O2 C1 H12C H13C 120.0 120.0
H11C C1 H12C H13C 240.1 240.0
H13C C1 O2 C3 60.0 180.0
O2 C1 H13C H11C 120.0 120.0
O2 C1 H13C H12C 240.0 240.0
H11C C1 H13C H12C 120.0 120.0
H4 C4 C3 C10 177.4 180.2
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 O6 359.5 0.0
H4 C4 C5 C8 182.3 180.0
O6 C7 H71C H72C 120.0 120.0
O6 C7 H71C H73C 240.0 239.9
H72C C7 H71C H73C 120.0 120.0
O6 C7 H72C H71C 239.9 240.0
O6 C7 H72C H73C 120.0 120.0
H71C C7 H72C H73C 240.0 240.0
O6 C7 H73C H71C 120.0 120.1
O6 C7 H73C H72C 240.0 240.0
H71C C7 H73C H72C 120.0 120.0
H9 C9 C8 S15 358.0 360.0
C8 C9 H9 C10 180.0 179.7
H9 C9 C10 N11 1.0 360.0
C10 N11 H11 C12 180.0 180.0
H11 N11 C12 O13 177.8 175.2
H11 N11 C12 C14 356.6 355.1
C12 C14 H141 H142 120.0 120.0
C12 C14 H141 H143 240.0 240.0
H142 C14 H141 H143 120.0 120.0
C12 C14 H142 H141 240.0 240.0
C12 C14 H142 H143 120.0 120.1
H141 C14 H142 H143 240.0 240.1
C12 C14 H143 H141 120.0 120.0
C12 C14 H143 H142 240.0 239.9
H141 C14 H143 H142 120.0 119.9
H19 C19 N18 C27 220.4 241.3
N18 C19 H19 C20 233.9 237.9
N18 C19 H19 C21 108.7 115.8
C20 C19 H19 C21 234.8 237.9
H19 C19 C20 H201 58.4 303.7
H19 C19 C20 H202 178.4 63.7
H19 C19 C20 H203 298.4 183.6
H19 C19 C21 C22 135.3 118.9
H19 C19 C21 H211 254.5 237.8
H19 C19 C21 H212 16.1 0.2
H201 C20 C19 C21 298.0 181.5
H201 C20 C19 H19 58.4 303.7
C19 C20 H201 H202 120.0 120.0
C19 C20 H201 H203 240.0 240.0
H202 C20 H201 H203 120.0 120.0
H202 C20 C19 C21 58.0 301.5
H202 C20 C19 H19 178.4 63.7
C19 C20 H202 H201 240.0 240.0
C19 C20 H202 H203 120.0 120.0
H201 C20 H202 H203 240.0 240.0
H203 C20 C19 C21 178.0 61.5
H203 C20 C19 H19 298.4 183.6
C19 C20 H203 H201 120.1 120.0
C19 C20 H203 H202 240.0 240.0
H201 C20 H203 H202 120.0 120.0
C19 C21 H211 C22 244.7 244.8
H211 C21 C19 H19 254.5 237.8
C19 C21 H211 H212 122.3 122.4
H211 C21 C22 C23 48.1 61.2
H211 C21 C22 C27 229.7 241.0
C22 C21 H211 H212 237.7 237.5
C19 C21 H212 C22 115.3 115.1
H212 C21 C19 H19 16.1 0.2
C19 C21 H212 H211 237.7 237.6
H212 C21 C22 C23 286.5 298.7
H212 C21 C22 C27 108.2 118.5
C22 C21 H212 H211 122.3 122.5
H23 C23 C22 C27 178.9 180.3
C22 C23 H23 C24 180.0 179.9
H23 C23 C24 C25 181.3 180.0
H23 C23 C24 H24 1.3 359.9
C23 C24 H24 C25 180.0 180.1
H24 C24 C23 H23 1.3 359.9
H24 C24 C25 C26 179.7 180.1
H24 C24 C25 H25 359.7 0.1
C24 C25 H25 C26 180.0 180.0
H25 C25 C24 H24 359.7 0.1
H25 C25 C26 C27 179.2 179.7
H25 C25 C26 H26 359.2 360.0
C25 C26 H26 C27 180.0 179.7
H26 C26 C25 H25 359.2 360.0