PDB Chemical Component R5I

Ideal Model

Chemical Description

Name inosine diphosphate ribose
Formula C15 H22 N4 O15 P2
Formal charge 0
Molecular weight 560.301 g/mol
Component type NON-POLYMER

Chemical features

Atom count 58
Chiral atom count 8
Chiral atoms C1' C4' C4D C1D C2D C3D C3' C2'
Bond count 61
Aromatic bond count 5

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4,5-tris(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@@H]1O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4C(=O)NC=Nc34)[C@@H](O)[C@H]1O
SMILES (CACTVS) O[CH]1O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4C(=O)NC=Nc34)[CH](O)[CH]1O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)O)O)O)O)O)N=CNC2=O
InChI descriptor InChI=1S/C15H22N4O15P2/c20-8-5(32-14(10(8)22)19-4-18-7-12(19)16-3-17-13(7)24)1-30-35(26,27)34-36(28,29)31-2-6-9(21)11(23)15(25)33-6/h3-6,8-11,14-15,20-23,25H,1-2H2,(H,26,27)(H,28,29)(H,16,17,24)/t5-,6-,8-,9-,10-,11-,14-,15-/m1/s1
InChIKey descriptor GKBLKKRZILWFNP-KEOHHSTQSA-N

Status Information

Last modified 2018-11-23
Created 2018-09-18
Release status REL
Model PDB code 6HOZ
Processing site EBI