PDB Chemical Component R47

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for R47

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
BR1 C22 1.547 1.891
C22 C21 1.396 1.383
C22 C23 1.414 1.384
C21 C20 1.404 1.383
C23 C24 1.420 1.382
C20 C19 1.396 1.382
C24 C19 1.406 1.382
C19 P1 1.780 1.814
O3 P1 1.520 1.480
P1 O2 1.503 1.611
P1 C18 1.781 1.823
O5 C29 1.246 1.208
C18 C17 1.522 1.531
C29 O6 1.253 1.342
C29 C28 1.523 1.507
C28 C27 1.520 1.530
C17 C16 1.517 1.530
C17 C25 1.482 1.506
C16 C15 1.490 1.507
N2 C25 1.321 1.348
N2 C26 1.458 1.466
C27 C26 1.531 1.530
C25 O4 1.209 1.212
C15 C14 1.382 1.352
C15 O1 1.343 1.340
C14 C13 1.399 1.423
C26 C30 1.518 1.507
C11 C10 1.382 1.377
C11 C12 1.379 1.395
O1 N1 1.324 1.209
C13 N1 1.338 1.311
C13 C12 1.467 1.483
C10 C7 1.391 1.394
C12 C9 1.388 1.394
C30 O7 1.238 1.213
C30 N3 1.328 1.348
CL1 C1 1.776 1.736
C2 C1 1.376 1.381
C2 C6 1.377 1.394
C7 C6 1.478 1.484
C7 C8 1.381 1.394
C9 C8 1.386 1.378
N3 C31 1.457 1.465
C1 C3 1.385 1.384
C6 C5 1.389 1.394
N4 C35 1.329 1.347
C3 C4 1.387 1.383
C5 C4 1.388 1.381
C35 C31 1.506 1.507
C35 O10 1.243 1.213
C31 C32 1.518 1.531
C32 C33 1.474 1.530
C33 C34 1.505 1.507
C34 O8 1.250 1.209
C34 O9 1.249 1.342
C17 H10 1.100 1.091
C16 H8 1.100 1.090
C16 H9 1.100 1.090
C14 H7 1.080 1.081
C11 H17 1.080 1.080
C10 H18 1.080 1.081
C8 H5 1.080 1.080
C9 H6 1.080 1.081
C2 H1 1.080 1.080
C3 H2 1.080 1.080
C4 H3 1.080 1.080
C5 H4 1.080 1.080
C18 H12 1.100 1.090
C18 H11 1.100 1.089
O2 H31 0.950 0.967
C20 H13 1.080 1.080
C21 H14 1.080 1.080
C23 H15 1.080 1.080
C24 H16 1.080 1.080
N2 H24 0.999 0.970
C26 H19 1.100 1.090
C27 H20 1.101 1.089
C27 H21 1.100 1.089
C28 H23 1.100 1.090
C28 H22 1.100 1.090
O6 H32 0.950 0.967
N3 H25 1.000 0.970
C31 H26 1.100 1.090
C32 H27 1.100 1.090
C32 H28 1.100 1.090
C33 H30 1.100 1.090
C33 H29 1.100 1.089
O9 H33 0.950 0.967
N4 H34 1.000 0.971
N4 H35 1.000 0.970

Bond Angles for R47

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
BR1 C22 C23 126.6 120.0
C22 C21 H14 118.7 120.0
C22 C23 C24 122.0 120.0
C22 C23 H15 119.0 120.0
C21 C20 H13 118.7 120.0
C24 C23 H15 119.0 120.1
C23 C24 H16 119.2 119.9
P1 O2 H31 109.5 114.0
P1 C18 H12 108.5 109.5
P1 C18 H11 108.5 109.5
O5 C29 O6 122.8 120.0
C18 C17 H10 102.8 109.4
C29 O6 H32 109.5 117.0
C29 C28 H23 108.4 109.5
C29 C28 H22 108.4 109.5
C28 C27 H20 108.9 109.5
C28 C27 H21 108.9 109.5
C17 C16 C15 118.7 109.5
C16 C17 H10 102.8 109.4
C17 C16 H8 107.1 109.5
C17 C16 H9 107.1 109.5
C16 C15 C14 134.2 126.6
C15 C16 H8 107.1 109.5
C15 C16 H9 107.1 109.4
N2 C26 C30 112.7 109.4
C26 N2 H24 119.9 120.0
N2 C26 H19 108.2 109.4
C27 C26 H19 107.4 109.5
C15 C14 H7 127.1 128.0
C14 C13 C12 129.0 127.0
C13 C14 H7 127.2 128.0
C26 C30 O7 121.0 120.0
C26 C30 N3 116.2 120.0
C30 C26 H19 107.5 109.5
C11 C10 C7 120.1 120.0
C10 C11 H17 120.5 120.0
C11 C10 H18 119.9 120.0
C11 C12 C9 121.3 120.0
C13 C12 C9 119.0 120.0
C10 C7 C6 119.0 120.0
C10 C7 C8 120.7 120.0
C7 C10 H18 120.0 120.0
C12 C9 C8 119.5 120.0
C12 C9 H6 120.2 120.0
O7 C30 N3 122.8 120.0
C30 N3 C31 120.3 120.0
C30 N3 H25 119.8 120.0
CL1 C1 C3 121.2 120.0
C2 C1 C3 121.3 120.1
C7 C6 C2 118.7 120.1
C2 C6 C5 120.3 119.8
C6 C2 H1 120.4 120.1
C8 C7 C6 120.3 120.0
C7 C6 C5 120.9 120.1
C7 C8 H5 120.3 120.0
C9 C8 H5 120.3 120.0
N3 C31 C32 110.6 109.5
C31 N3 H25 119.8 120.0
N3 C31 H26 109.6 109.4
C1 C3 C4 119.7 120.3
C1 C3 H2 120.1 119.9
C6 C5 H4 119.8 120.1
C4 C3 H2 120.2 119.8
C3 C4 H3 120.4 120.0
C5 C4 H3 120.4 119.9
C35 C31 C32 107.8 109.5
C35 C31 H26 108.9 109.5
C31 C32 C33 113.2 109.4
C32 C31 H26 108.8 109.4
C31 C32 H27 108.5 109.4
C31 C32 H28 108.5 109.4
C32 C33 C34 111.9 109.4
C33 C32 H27 108.5 109.5
C33 C32 H28 108.5 109.5
C32 C33 H30 108.8 109.5
C32 C33 H29 108.9 109.5
C33 C34 O8 117.8 120.0
C33 C34 O9 118.3 120.0
C34 C33 H30 108.8 109.4
C34 C33 H29 108.9 109.5
O8 C34 O9 123.9 120.0
C34 O9 H33 109.5 117.0
H8 C16 H9 109.5 109.5
H12 C18 H11 109.4 109.5
H20 C27 H21 109.5 109.5
H23 C28 H22 109.5 109.4
H27 C32 H28 109.5 109.5
H30 C33 H29 109.5 109.5
H34 N4 H35 120.0 120.0

Torsion Angles for R47

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
BR1 C22 C21 H14 360.0 0.0
BR1 C22 C23 C24 180.3 179.7
BR1 C22 C23 H15 0.2 0.0
C22 C21 C20 H13 180.4 180.0
C23 C22 C21 H14 179.6 180.1
C24 C23 C22 H15 180.0 179.7
C22 C23 C24 H16 179.1 180.0
C22 C23 C24 H15 180.0 180.3
C19 P1 O2 H31 238.2 59.3
C19 P1 C18 H12 291.1 56.0
C19 P1 C18 H11 49.9 296.0
O3 P1 O2 H31 360.0 179.3
O3 P1 C18 H12 175.1 296.0
O3 P1 C18 H11 293.9 176.0
O2 P1 C18 H12 50.8 175.9
O2 P1 C18 H11 169.6 55.9
P1 C18 C17 H10 308.2 316.3
H12 C18 P1 H11 241.2 120.0
O5 C29 O6 H32 360.0 360.0
O5 C29 C28 H23 43.6 240.0
O5 C29 C28 H22 162.4 120.0
C16 C17 C18 H10 112.4 119.9
C18 C17 C16 H8 324.7 306.3
C18 C17 C16 H9 82.1 66.3
O6 C29 C28 H23 225.8 60.0
O6 C29 C28 H22 344.5 300.0
C29 C28 C27 H20 300.0 60.0
C29 C28 C27 H21 59.3 300.0
H23 C28 C29 H22 241.2 120.0
C28 C27 C26 H19 48.9 55.0
H20 C27 C28 H21 240.7 120.0
C18 C17 C16 H10 247.6 240.1
C17 C16 C15 C14 28.5 84.4
C15 C16 C17 H8 238.7 240.0
C15 C16 C17 H9 121.3 120.0
H8 C16 C17 H9 242.7 240.0
C15 C16 C17 H10 315.8 306.2
C17 C16 C15 H8 121.3 120.0
C17 C16 C15 H9 238.7 240.0
C16 C15 C14 H7 357.7 0.1
H8 C16 C15 H9 117.4 120.0
C27 C26 N2 H19 116.9 120.1
N2 C26 C30 O7 326.5 360.0
N2 C26 C30 N3 147.5 180.0
C30 C26 N2 H19 241.3 240.0
C27 C26 N2 H24 319.2 265.1
N2 C26 C27 H19 242.6 240.0
C27 C26 C30 N3 271.1 300.0
C30 C26 C27 H19 117.3 120.0
C14 C15 C16 H8 267.2 324.4
C14 C15 C16 H9 149.8 204.4
C13 C14 C15 H7 180.0 179.9
C16 C15 C14 C13 177.7 180.0
C15 C14 C13 H7 180.0 180.1
C14 C13 C12 C9 186.3 180.0
C30 C26 N2 H24 83.7 25.1
N2 C26 C30 H19 119.2 119.9
C27 C26 C30 H19 242.8 239.9
O7 C30 C26 N3 179.0 180.0
C26 C30 N3 C31 174.5 180.0
C26 C30 N3 H25 354.5 360.0
C10 C11 C12 C9 2.7 0.3
C11 C10 C7 C6 181.4 180.0
C11 C10 C7 C8 358.3 360.0
C7 C10 C11 H18 180.0 180.0
C13 C12 C11 C9 175.0 179.7
C11 C12 C9 C8 357.0 359.4
C11 C12 C9 H6 176.9 179.7
C12 C13 C14 H7 3.0 359.9
C11 C12 C13 C9 184.9 180.3
C13 C12 C9 C8 182.0 179.7
C13 C12 C9 H6 2.0 0.0
C7 C10 C11 H17 179.7 180.0
C11 C10 C7 H18 180.0 180.0
C10 C7 C6 C2 338.7 180.0
C8 C7 C10 C6 176.9 180.0
C10 C7 C6 C5 154.1 360.0
C10 C7 C8 H5 181.3 180.0
C12 C9 C8 H5 181.0 180.3
C26 C30 O7 N3 181.1 180.0
O7 C30 C26 H19 207.3 240.0
O7 C30 N3 C31 355.6 360.0
O7 C30 N3 H25 175.6 180.0
C26 C30 N3 O7 179.0 180.0
N3 C30 C26 H19 28.3 60.0
C30 N3 C31 C32 180.2 155.0
C31 N3 C30 H25 180.0 180.0
C30 N3 C31 H26 60.1 35.0
C2 C1 CL1 C3 179.8 180.3
CL1 C1 C3 C4 179.9 180.0
CL1 C1 C3 H2 359.9 0.0
CL1 C1 C2 C3 180.2 179.7
C7 C6 C2 C1 177.8 180.0
C2 C1 C3 C4 0.1 359.7
C2 C1 C3 H2 180.1 179.8
C6 C2 C1 C3 358.7 0.3
C8 C7 C6 C2 161.8 0.0
C7 C6 C2 C5 175.4 180.0
C2 C6 C5 H4 177.6 180.0
C10 C7 C6 C8 176.9 180.0
C6 C7 C10 H18 1.4 0.0
C2 C6 C7 C5 184.6 180.0
C7 C6 C2 H1 357.9 360.0
C6 C7 C8 H5 358.2 0.0
C7 C6 C5 H4 2.3 0.0
C10 C7 C8 C6 183.1 180.0
C8 C7 C10 H18 178.3 180.0
C12 C9 C8 C7 1.0 0.5
C8 C7 C6 C5 337.2 180.0
C9 C8 C7 H5 180.0 179.7
C12 C9 C8 H6 180.0 180.3
C9 C8 C7 C6 178.2 179.7
C7 C8 C9 H5 180.0 180.3
C30 N3 C31 H25 180.0 180.0
C35 C31 N3 C32 119.6 120.0
C35 C31 N3 H26 239.6 240.0
N3 C31 C32 C33 284.2 295.0
C32 C31 N3 H26 120.0 120.0
N3 C31 C32 H27 44.7 55.0
N3 C31 C32 H28 163.6 175.0
C4 C3 C1 H2 180.0 180.0
C1 C3 C4 H3 179.9 179.9
C7 C6 C5 C2 184.7 180.0
C5 C6 C2 H1 182.4 180.0
C6 C5 C4 H3 181.2 180.4
N4 C35 C31 H26 192.4 60.0
C1 C3 C4 H2 180.0 180.0
C5 C4 C3 H3 180.0 180.1
C2 C6 C5 C4 357.6 359.7
C7 C6 C5 C4 182.3 179.8
C5 C4 C3 H2 179.9 180.0
C3 C4 C5 H3 180.0 179.9
N3 C31 C35 C32 238.7 240.0
C35 C31 N3 H25 119.8 95.0
N3 C31 C35 H26 120.8 120.0
C35 C31 C32 C33 162.7 175.0
C32 C31 C35 H26 242.0 240.0
C35 C31 C32 H27 283.2 295.0
C35 C31 C32 H28 42.1 55.0
O10 C35 C31 C32 255.7 120.1
O10 C35 C31 H26 13.6 240.0
C32 C31 N3 H25 0.2 335.0
N3 C31 C32 H26 239.5 240.0
C35 C31 C32 H26 118.0 120.0
C31 C32 C33 C34 195.3 180.0
C33 C32 C31 H27 239.4 240.1
C33 C32 C31 H28 120.6 120.1
C31 C32 C33 H30 315.6 299.9
C31 C32 C33 H29 74.9 60.0
H27 C32 C31 H28 241.1 240.0
C33 C32 C31 H26 44.7 55.0
C31 C32 C33 H27 120.6 119.9
C31 C32 C33 H28 239.4 240.0
C32 C33 C34 O8 328.8 360.0
C32 C33 C34 O9 149.2 180.0
C34 C33 C32 H30 239.7 240.1
C34 C33 C32 H29 120.4 120.0
H27 C32 C33 H28 118.9 120.1
H30 C33 C32 H29 240.7 240.0
C34 C33 C32 H27 74.7 60.1
C34 C33 C32 H28 315.8 300.0
C32 C33 C34 H30 120.4 119.9
C32 C33 C34 H29 239.6 239.9
O8 C34 C33 O9 179.6 180.0
C33 C34 O9 H33 179.6 180.0
H30 C33 C34 H29 119.3 120.0
C33 C34 O8 O9 180.4 180.0
O8 C34 C33 H30 208.5 240.0
O8 C34 C33 H29 89.2 120.0
O8 C34 O9 H33 0.0 0.0
C33 C34 O9 O8 179.6 180.0
O9 C34 C33 H30 28.8 60.0
O9 C34 C33 H29 269.6 300.1
H10 C17 C16 C15 315.8 306.2
H10 C17 C16 H8 77.1 66.2
H10 C17 C16 H9 194.5 186.3
C17 C16 H8 C15 231.6 240.0
H8 C16 C17 H10 77.1 66.2
C17 C16 H8 H9 115.8 120.0
H8 C16 C15 C14 267.2 324.4
C15 C16 H8 H9 244.2 240.1
C17 C16 H9 C15 128.4 120.0
H9 C16 C17 H10 194.5 186.3
C17 C16 H9 H8 244.2 240.0
H9 C16 C15 C14 149.8 204.4
C15 C16 H9 H8 115.8 120.0
H7 C14 C13 C12 3.0 359.9
H17 C11 C10 C7 179.7 180.0
H17 C11 C10 H18 359.7 360.0
H17 C11 C12 C9 182.7 180.3
C11 C10 H18 C7 180.0 180.0
H18 C10 C11 H17 359.7 360.0
H18 C10 C7 C6 1.4 0.0
H18 C10 C7 C8 178.3 180.0
H5 C8 C7 C6 358.2 0.0
C12 C9 H6 C8 180.0 179.7
H6 C9 C8 H5 1.1 360.0
H1 C2 C1 C3 178.7 180.3
H1 C2 C6 C5 182.4 180.0
C1 C3 H2 C4 180.0 180.0
H2 C3 C4 H3 359.9 359.9
H3 C4 C3 H2 359.9 359.9
H4 C5 C4 H3 1.2 0.1
P1 C18 H12 H11 118.2 240.0
H12 C18 C17 H10 187.6 76.3
P1 C18 H11 H12 241.8 120.0
H11 C18 C17 H10 68.8 196.3
H14 C21 C20 H13 0.4 359.9
C22 C23 H15 C24 180.0 179.7
H15 C23 C24 H16 359.1 359.8
H16 C24 C23 H15 359.1 359.8
H24 N2 C26 C30 83.7 25.1
H24 N2 C26 H19 202.4 145.0
N2 C26 H19 C30 238.0 240.1
H19 C26 N2 H24 202.4 145.0
H19 C26 C30 O7 207.3 240.0
H19 C26 C30 N3 28.3 60.0
C28 C27 H20 H21 118.9 240.0
H20 C27 C26 H19 288.6 175.0
C28 C27 H21 H20 241.0 120.0
H21 C27 C26 H19 169.2 295.0
C29 C28 H23 H22 118.1 240.0
H23 C28 C27 H20 179.3 180.0
H23 C28 C27 H21 298.6 60.0
C29 C28 H22 H23 241.9 120.0
H22 C28 C27 H20 60.6 300.0
H22 C28 C27 H21 179.9 179.9
C30 N3 H25 C31 180.0 180.0
H25 N3 C31 C32 0.2 335.0
H25 N3 C31 H26 240.1 215.0
N3 C31 H26 C32 121.1 120.0
H26 C31 N3 H25 240.1 215.0
C35 C31 H26 C32 242.7 240.0
H26 C31 C32 C33 44.7 55.0
H26 C31 C32 H27 165.2 175.0
H26 C31 C32 H28 284.1 295.0
C31 C32 H27 C33 236.6 240.1
H27 C32 C31 H26 165.2 175.0
C31 C32 H27 H28 118.3 120.0
H27 C32 C33 C34 74.7 60.1
C33 C32 H27 H28 241.7 239.9
H27 C32 C33 H30 195.1 180.0
H27 C32 C33 H29 314.3 300.0
C31 C32 H28 C33 123.4 120.0
H28 C32 C31 H26 284.1 295.0
C31 C32 H28 H27 241.7 240.0
H28 C32 C33 C34 315.8 300.0
C33 C32 H28 H27 118.3 120.0
H28 C32 C33 H30 76.2 59.9
H28 C32 C33 H29 195.4 180.0
C32 C33 H30 C34 237.8 240.1
H30 C33 C32 H27 195.1 180.0
H30 C33 C32 H28 76.2 59.9
C32 C33 H30 H29 118.9 120.1
H30 C33 C34 O8 208.5 240.0
H30 C33 C34 O9 28.8 60.0
C34 C33 H30 H29 241.1 240.0
C32 C33 H29 C34 122.3 120.0
H29 C33 C32 H27 314.3 300.0
H29 C33 C32 H28 195.4 180.0
C32 C33 H29 H30 241.1 240.0
H29 C33 C34 O8 89.2 120.0
H29 C33 C34 O9 269.6 300.1
C34 C33 H29 H30 118.9 120.0