PDB Chemical Component R22

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for R22

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1' C2' 1.433 1.387
C1' C6' 1.445 1.388
C1' O7' 1.417 1.359
C2' C3' 1.421 1.381
C2' H2' 1.103 1.081
C3' C4' 1.430 1.382
C3' C8' 1.510 1.508
C4' C5' 1.427 1.382
C4' H4' 1.103 1.080
C5' C6' 1.414 1.382
C5' C9' 1.495 1.507
C6' H6' 1.103 1.079
O7' C4 1.396 1.355
C8' H8'1 1.115 1.089
C8' H8'2 1.115 1.091
C8' H8'3 1.115 1.090
C9' H9'1 1.115 1.090
C9' H9'2 1.115 1.090
C9' H9'3 1.115 1.090
N1 C2 1.367 1.345
N1 C6 1.415 1.359
N1 HN1 1.020 0.970
C2 C3 1.502 1.400
C2 O8 1.233 1.221
C3 C4 1.389 1.383
C3 I9 2.025 2.095
C4 C5 1.398 1.409
C5 C6 1.350 1.351
C5 C10 1.494 1.507
C6 C7 1.525 1.506
C7 H71 1.115 1.090
C7 H72 1.115 1.090
C7 H73 1.115 1.091
C10 S11 1.831 1.815
C10 H101 1.115 1.090
C10 H102 1.115 1.090
S11 C12 1.776 1.814
C12 C13 1.490 1.507
C12 H121 1.115 1.090
C12 H122 1.115 1.090
C13 O14 1.351 1.343
C13 C17 1.365 1.345
O14 C15 1.363 1.343
C15 C16 1.365 1.346
C15 H15 1.103 1.080
C16 C17 1.414 1.414
C16 H16 1.103 1.080
C17 H17 1.103 1.079

Bond Angles for R22

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2' C1' C6' 118.3 119.9
C2' C1' O7' 116.7 120.1
C1' C2' C3' 121.0 120.0
C1' C2' H2' 119.9 120.0
C6' C1' O7' 125.0 120.1
C1' C6' C5' 120.9 119.9
C1' C6' H6' 120.6 120.0
C1' O7' C4 118.5 106.8
C3' C2' H2' 119.1 120.1
C2' C3' C4' 119.8 120.1
C2' C3' C8' 119.5 120.0
C4' C3' C8' 120.7 120.0
C3' C4' C5' 120.0 120.1
C3' C4' H4' 120.1 119.9
C3' C8' H8'1 108.6 109.5
C3' C8' H8'2 119.5 109.4
C3' C8' H8'3 108.6 109.4
C5' C4' H4' 119.9 119.9
C4' C5' C6' 120.1 120.1
C4' C5' C9' 120.0 120.0
C6' C5' C9' 120.0 119.9
C5' C6' H6' 118.5 120.1
C5' C9' H9'1 108.4 109.5
C5' C9' H9'2 120.0 109.5
C5' C9' H9'3 108.5 109.5
O7' C4 C3 120.6 120.5
O7' C4 C5 116.9 120.5
H8'1 C8' H8'2 108.6 109.5
H8'1 C8' H8'3 101.4 109.5
H8'2 C8' H8'3 108.6 109.5
H9'1 C9' H9'2 108.5 109.5
H9'1 C9' H9'3 101.5 109.5
H9'2 C9' H9'3 108.4 109.4
C2 N1 C6 123.5 121.1
C2 N1 HN1 116.4 119.5
N1 C2 C3 115.4 120.2
N1 C2 O8 116.7 120.0
C6 N1 HN1 120.1 119.4
N1 C6 C5 120.9 120.8
N1 C6 C7 111.9 119.6
C3 C2 O8 127.9 119.9
C2 C3 C4 118.6 119.1
C2 C3 I9 120.1 120.5
C4 C3 I9 121.3 120.4
C3 C4 C5 122.5 119.0
C4 C5 C6 119.1 119.8
C4 C5 C10 123.9 120.1
C6 C5 C10 117.1 120.0
C5 C6 C7 127.2 119.6
C5 C10 S11 121.6 109.4
C5 C10 H101 107.9 109.5
C5 C10 H102 107.9 109.5
C6 C7 H71 111.3 109.5
C6 C7 H72 111.9 109.5
C6 C7 H73 111.3 109.5
H71 C7 H72 111.3 109.4
H71 C7 H73 99.0 109.4
H72 C7 H73 111.3 109.4
S11 C10 H101 107.9 109.4
S11 C10 H102 107.9 109.5
C10 S11 C12 106.2 100.0
H101 C10 H102 102.0 109.5
S11 C12 C13 111.0 109.4
S11 C12 H121 111.6 109.5
S11 C12 H122 111.6 109.4
C13 C12 H121 111.7 109.5
C13 C12 H122 111.7 109.5
C12 C13 O14 113.3 125.8
C12 C13 C17 135.1 125.8
H121 C12 H122 98.7 109.5
O14 C13 C17 111.6 108.4
C13 O14 C15 105.4 109.5
C13 C17 C16 105.9 106.8
C13 C17 H17 125.7 126.6
O14 C15 C16 111.4 108.4
O14 C15 H15 124.3 125.8
C16 C15 H15 124.4 125.8
C15 C16 C17 105.7 106.8
C15 C16 H16 125.8 126.5
C17 C16 H16 128.5 126.6
C16 C17 H17 128.4 126.6

Torsion Angles for R22

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6' C1' C2' O7' 178.5 179.7
C2' C1' C6' C5' 0.6 0.3
C2' C1' C6' H6' 180.6 180.2
C2' C1' O7' C4 158.4 184.6
C3' C2' C1' H2' 180.0 179.5
C1' C2' C3' C4' 359.8 0.5
C1' C2' C3' C8' 180.3 180.2
C2' C1' C6' O7' 181.6 180.3
C6' C1' C2' C3' 359.7 359.5
C6' C1' C2' H2' 179.7 180.0
C6' C1' O7' C4 340.1 4.9
C4' C5' C6' C1' 359.7 359.9
C1' C6' C5' C9' 179.8 180.0
C5' C6' C1' H6' 180.0 180.1
C2' C1' O7' C6' 178.4 179.7
O7' C1' C2' C3' 181.2 179.8
O7' C1' C2' H2' 1.2 0.3
O7' C1' C6' C5' 178.9 180.0
O7' C1' C6' H6' 358.9 359.9
C1' O7' C4 C3 99.2 100.2
C1' O7' C4 C5 279.5 280.1
C3' C2' C1' C6' 359.7 359.5
C3' C2' C1' O7' 181.2 179.8
C1' C2' C3' H2' 180.0 180.5
C4' C3' C2' C8' 179.5 180.3
C2' C3' C4' C5' 0.4 359.7
C2' C3' C4' H4' 180.4 179.8
C2' C3' C8' H8'1 54.8 274.9
C2' C3' C8' H8'2 180.0 35.0
C2' C3' C8' H8'3 305.3 154.9
H2' C2' C1' C6' 179.7 180.0
H2' C2' C1' O7' 1.2 0.3
C1' C2' H2' C3' 180.0 179.5
H2' C2' C3' C4' 179.8 180.0
H2' C2' C3' C8' 0.3 359.8
C4' C3' C2' H2' 179.8 180.0
C2' C3' C4' C8' 180.5 179.7
C4' C3' C8' H8'1 235.3 94.7
C4' C3' C8' H8'2 0.5 214.7
C4' C3' C8' H8'3 125.8 334.7
C5' C4' C3' H4' 180.0 180.0
C3' C4' C5' C6' 359.8 0.1
C3' C4' C5' C9' 179.7 180.0
C8' C3' C2' H2' 0.3 359.8
C2' C3' C8' C4' 179.5 180.3
C8' C3' C4' C5' 179.9 180.0
C8' C3' C4' H4' 359.9 0.0
H8'1 C8' C3' H8'2 234.7 239.9
H8'1 C8' C3' H8'3 109.5 120.0
H8'2 C8' C3' H8'3 234.7 240.1
C1' C6' C5' C4' 359.7 359.9
C5' C4' C3' C8' 179.9 180.0
C3' C4' C5' H4' 180.0 180.0
C6' C5' C4' C9' 180.1 180.0
C4' C5' C6' H6' 179.7 180.0
C4' C5' C9' H9'1 54.7 270.0
C4' C5' C9' H9'2 180.0 30.0
C4' C5' C9' H9'3 305.3 150.0
H4' C4' C3' C8' 359.9 0.0
C3' C4' H4' C5' 180.0 180.0
H4' C4' C5' C6' 179.8 180.0
H4' C4' C5' C9' 359.7 360.0
C5' C6' C1' O7' 178.9 180.0
C1' C6' C5' H6' 180.0 179.9
C6' C5' C4' H4' 179.8 180.0
C4' C5' C6' C9' 179.9 180.0
C6' C5' C9' H9'1 234.6 90.0
C6' C5' C9' H9'2 359.9 210.0
C6' C5' C9' H9'3 125.2 330.0
C9' C5' C4' H4' 359.7 360.0
C4' C5' C9' C6' 180.1 180.0
C9' C5' C6' H6' 359.8 0.1
H9'1 C9' C5' H9'2 234.7 239.9
H9'1 C9' C5' H9'3 109.5 120.0
H9'2 C9' C5' H9'3 234.7 240.1
H6' C6' C1' O7' 358.9 359.9
C1' C6' H6' C5' 180.0 180.1
H6' C6' C5' C9' 359.8 0.1
C2 C3 C4 O7' 181.8 180.0
O7' C4 C3 I9 3.3 360.0
C3 C4 O7' C5 179.7 180.1
O7' C4 C5 C6 179.5 180.0
O7' C4 C5 C10 358.2 0.0
C3' C8' H8'1 H8'2 131.4 120.0
C3' C8' H8'1 H8'3 245.7 240.0
H8'2 C8' H8'1 H8'3 114.3 120.0
C3' C8' H8'2 H8'1 234.7 240.0
C3' C8' H8'2 H8'3 125.3 119.9
H8'1 C8' H8'2 H8'3 250.5 240.0
C3' C8' H8'3 H8'1 114.3 120.0
C3' C8' H8'3 H8'2 228.6 240.1
H8'1 C8' H8'3 H8'2 114.3 120.1
C5' C9' H9'1 H9'2 131.8 120.1
C5' C9' H9'1 H9'3 245.9 240.0
H9'2 C9' H9'1 H9'3 114.1 119.9
C5' C9' H9'2 H9'1 234.7 240.0
C5' C9' H9'2 H9'3 125.3 120.0
H9'1 C9' H9'2 H9'3 250.5 240.0
C5' C9' H9'3 H9'1 114.1 120.0
C5' C9' H9'3 H9'2 228.2 240.0
H9'1 C9' H9'3 H9'2 114.1 120.0
C6 N1 C2 HN1 180.0 180.5
C2 N1 C6 C5 1.7 359.5
C2 N1 C6 C7 181.4 179.7
C3 C2 N1 O8 180.6 180.3
N1 C2 C3 C4 358.9 359.7
N1 C2 C3 I9 177.4 179.7
C2 N1 C6 HN1 180.0 179.5
C6 N1 C2 C3 359.6 0.5
C6 N1 C2 O8 179.0 180.2
C4 C5 C6 N1 358.7 0.3
N1 C6 C5 C10 179.9 180.2
C5 C6 N1 C7 180.2 179.8
N1 C6 C7 H71 54.8 269.7
N1 C6 C7 H72 180.0 29.8
N1 C6 C7 H73 305.3 149.7
C2 N1 HN1 C6 180.0 180.5
HN1 N1 C2 C3 179.6 180.0
HN1 N1 C2 O8 359.0 359.8
HN1 N1 C6 C5 181.7 180.0
HN1 N1 C6 C7 1.4 0.2
O7' C4 C3 C2 181.8 180.0
C3 C2 N1 C6 359.6 0.5
C3 C2 N1 HN1 179.6 180.0
N1 C2 C3 O8 179.3 179.7
C4 C3 C2 I9 181.5 180.0
C2 C3 C4 C5 1.5 0.1
O8 C2 N1 C6 179.0 180.2
O8 C2 N1 HN1 359.0 359.8
N1 C2 O8 C3 180.7 180.3
O8 C2 C3 C4 179.5 180.0
O8 C2 C3 I9 358.1 360.0
O7' C4 C3 C5 180.3 179.9
C4 C3 C2 O8 179.5 180.0
C2 C3 C4 I9 178.5 180.0
C3 C4 C5 C6 359.8 360.0
C3 C4 C5 C10 178.5 180.0
I9 C3 C2 O8 358.1 360.0
C2 C3 I9 C4 181.5 180.0
I9 C3 C4 C5 182.9 180.0
O7' C4 C5 C3 179.7 180.1
N1 C6 C5 C4 358.7 0.3
C5 C4 C3 I9 182.9 180.0
C6 C5 C4 C10 181.3 180.0
C4 C5 C6 C7 178.9 180.0
C4 C5 C10 S11 336.6 285.0
C4 C5 C10 H101 211.3 44.9
C4 C5 C10 H102 101.9 165.0
C5 C6 N1 HN1 181.7 180.0
N1 C6 C5 C7 179.7 180.2
C4 C5 C6 C10 178.8 180.0
C6 C5 C10 S11 155.4 105.0
C6 C5 C10 H101 30.1 225.0
C6 C5 C10 H102 280.6 345.0
C5 C6 C7 H71 234.5 90.0
C5 C6 C7 H72 359.8 210.0
C5 C6 C7 H73 125.1 330.0
C4 C5 C10 C6 181.3 180.0
C10 C5 C6 C7 0.1 0.0
S11 C10 C5 H101 125.3 240.0
S11 C10 C5 H102 234.7 120.0
C5 C10 S11 C12 230.8 180.0
H101 C10 C5 H102 109.5 240.0
C7 C6 N1 HN1 1.4 0.2
N1 C6 C7 C5 180.2 179.8
C7 C6 C5 C10 0.1 0.0
H71 C7 C6 H72 234.8 240.0
H71 C7 C6 H73 109.5 120.0
H72 C7 C6 H73 234.7 240.0
C6 C7 H71 H72 125.6 120.0
C6 C7 H71 H73 242.8 239.9
H72 C7 H71 H73 117.2 119.9
C6 C7 H72 H71 234.8 240.0
C6 C7 H72 H73 125.3 120.0
H71 C7 H72 H73 250.5 240.1
C6 C7 H73 H71 117.2 120.1
C6 C7 H73 H72 234.4 240.0
H71 C7 H73 H72 117.2 119.9
C5 C10 S11 H101 234.7 120.0
C5 C10 S11 H102 125.3 240.0
H101 C10 S11 H102 250.5 120.0
C10 S11 C12 C13 69.4 180.0
C10 S11 C12 H121 304.1 300.0
C10 S11 C12 H122 194.7 60.0
C5 C10 H101 S11 133.1 240.0
C5 C10 H101 H102 246.5 120.0
S11 C10 H101 H102 113.5 240.0
H101 C10 S11 C12 356.1 60.0
C5 C10 H102 S11 226.9 120.0
C5 C10 H102 H101 113.4 239.9
S11 C10 H102 H101 246.5 120.0
H102 C10 S11 C12 105.6 300.0
C12 S11 C10 H101 356.1 60.0
C12 S11 C10 H102 105.6 300.0
C13 C12 S11 H121 125.3 240.0
C13 C12 S11 H122 234.7 120.0
S11 C12 C13 O14 144.9 270.0
S11 C12 C13 C17 324.4 89.8
H121 C12 S11 H122 109.4 240.0
S11 C12 C13 H121 234.7 120.0
S11 C12 C13 H122 125.3 240.0
H121 C12 C13 H122 250.5 120.1
O14 C13 C12 C17 180.5 180.2
C12 C13 O14 C15 179.8 180.0
C12 C13 C17 C16 180.5 179.9
C12 C13 C17 H17 0.5 0.2
S11 C12 H121 C13 124.9 240.0
S11 C12 H121 H122 242.5 120.0
C13 C12 H121 H122 117.6 239.9
H121 C12 C13 O14 270.1 150.0
H121 C12 C13 C17 89.6 329.8
S11 C12 H122 C13 235.1 120.0
S11 C12 H122 H121 117.5 240.0
C13 C12 H122 H121 242.4 120.1
H122 C12 C13 O14 19.6 29.9
H122 C12 C13 C17 199.1 209.7
O14 C13 C12 H121 270.1 150.0
O14 C13 C12 H122 19.6 29.9
C12 C13 O14 C17 179.6 179.8
O14 C13 C17 C16 360.0 359.7
O14 C13 C17 H17 180.0 180.1
C13 O14 C15 C16 359.7 0.0
C13 O14 C15 H15 179.7 180.0
C17 C13 C12 H121 89.6 329.8
C17 C13 C12 H122 199.1 209.7
C12 C13 C17 O14 180.5 180.2
C17 C13 O14 C15 0.2 0.2
C15 C16 C17 C13 359.9 0.3
C13 C17 C16 H16 179.9 180.2
C16 C17 C13 H17 180.0 179.6
C15 O14 C13 C17 0.2 0.2
C16 C15 O14 H15 180.0 180.0
O14 C15 C16 C17 0.3 359.8
O14 C15 C16 H16 180.3 179.9
C13 C17 C16 C15 359.9 0.3
O14 C15 C16 H15 180.0 180.0
C17 C16 C15 H16 180.0 179.8
C15 C16 C17 H17 179.8 180.0
O14 C15 H15 C16 180.0 180.0
H15 C15 C16 C17 180.3 179.8
H15 C15 C16 H16 0.3 359.9
C13 C17 C16 H17 180.0 180.4
C17 C16 C15 H15 180.3 179.8
C15 C16 C17 H16 180.0 180.2
H16 C16 C15 H15 0.3 359.9
C15 C16 H16 C17 180.0 179.8
H16 C16 C17 H17 359.8 359.8
C13 C17 H17 C16 180.0 179.5
H17 C17 C16 H16 359.8 359.8