PDB Chemical Component R1Z

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for R1Z

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C21 C22 1.457  
C21 C20 1.330  
C22 C23 1.364  
C25 C26 1.381  
C25 C24 1.374  
C26 C27 1.382  
C20 C19 1.479  
C23 C24 1.468  
C23 N5 1.427  
C24 N6 1.338  
C27 C28 1.382  
C19 N5 1.321  
N5 RU1 2.023  
N6 C28 1.341  
N6 RU1 2.068  
C14 C15 1.377  
C14 C13 1.399  
C15 N1 1.327  
C13 C1 1.420  
N1 RU1 2.046  
N1 C2 1.342  
RU1 N8 2.023  
RU1 N2 2.057  
RU1 N7 2.062  
C1 C2 1.403  
C1 C12 1.426  
C38 N8 1.324  
C38 C37 1.487  
C2 C3 1.395  
N8 C34 1.423  
N4 C12 1.338  
N4 C11 1.361  
C37 C36 1.328  
C12 C5 1.420  
C3 N2 1.358  
C3 C4 1.384  
N2 C16 1.329  
C10 C11 1.402  
C10 C9 1.375  
C11 C6 1.418  
N7 C29 1.344  
N7 C33 1.355  
C5 C4 1.424  
C5 N3 1.342  
C34 C33 1.477  
C34 C35 1.359  
C36 C35 1.452  
C4 C18 1.427  
C29 C30 1.386  
C16 C17 1.378  
C9 C8 1.378  
C33 C32 1.385  
C6 N3 1.361  
C6 C7 1.397  
C18 C17 1.396  
C8 C7 1.383  
C30 C31 1.384  
C32 C31 1.390  
C29 H291 1.080  
C30 H301 1.079  
C31 H311 1.079  
C32 H321 1.080  
C38 H381 1.080  
C37 H371 1.080  
C36 H361 1.080  
C35 H351 1.080  
C28 H281 1.080  
C27 H271 1.080  
C26 H261 1.080  
C25 H251 1.080  
C19 H191 1.081  
C20 H201 1.080  
C21 H211 1.080  
C22 H221 1.080  
C10 H101 1.080  
C13 H131 1.080  
C14 H141 1.080  
C15 H151 1.080  
C9 H91 1.080  
C8 H81 1.079  
C7 H71 1.080  
C18 H181 1.080  
C17 H171 1.079  
C16 H161 1.080  

Bond Angles for R1Z

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C22 C21 H211 120.5  
C21 C22 H221 120.4  
C21 C20 H201 120.0  
C25 C26 H261 119.9  
C24 C25 H251 121.5  
C26 C27 H271 120.7  
C20 C19 H191 119.3  
C27 C28 H281 118.9  
N5 RU1 N2 93.5  
N6 C28 H281 118.9  
N6 RU1 N2 171.7  
C14 C15 N1 124.2  
C15 C14 H141 121.1  
C14 C15 H151 117.9  
C14 C13 H131 120.4  
C15 N1 C2 119.1  
N1 C15 H151 117.9  
C13 C1 C2 117.7  
N1 RU1 N2 79.3  
C1 C2 N1 122.0  
N1 C2 C3 117.5  
N8 RU1 N2 96.8  
N7 RU1 N8 80.0  
RU1 N8 C34 115.5  
N7 RU1 N2 91.7  
RU1 N2 C3 113.2  
RU1 N2 C16 127.4  
RU1 N7 C29 126.2  
RU1 N7 C33 115.1  
C1 C2 C3 120.5  
C1 C12 C5 118.4  
C38 C37 C36 120.4  
C37 C38 H381 119.7  
C38 C37 H371 119.8  
C2 C3 N2 116.4  
C2 C3 C4 121.2  
N8 C34 C35 122.7  
N4 C12 C5 121.7  
N4 C11 C6 121.5  
C37 C36 C35 119.1  
C36 C37 H371 119.8  
C37 C36 H361 120.4  
C12 C5 C4 120.7  
C12 C5 N3 121.3  
C4 C3 N2 122.4  
C3 N2 C16 119.4  
C3 C4 C5 119.2  
C3 C4 C18 116.9  
N2 C16 H161 118.2  
C11 C10 C9 119.1  
C10 C11 C6 119.8  
C11 C10 H101 120.4  
C10 C9 C8 120.9  
C9 C10 H101 120.4  
C10 C9 H91 119.6  
C11 C6 N3 120.4  
C11 C6 C7 119.8  
C29 N7 C33 118.5  
N7 C29 C30 121.7  
N7 C29 H291 119.2  
N7 C33 C32 123.0  
C5 C4 C18 123.9  
C34 C35 C36 118.9  
C34 C35 H351 120.6  
C35 C36 H361 120.4  
C36 C35 H351 120.5  
C4 C18 C17 120.3  
C4 C18 H181 119.9  
C29 C30 C31 119.3  
C30 C29 H291 119.1  
C29 C30 H301 120.3  
C16 C17 H171 121.2  
C9 C8 C7 121.6  
C8 C9 H91 119.5  
C9 C8 H81 119.2  
C33 C32 H321 121.1  
C6 C7 H71 120.7  
C17 C18 H181 119.9  
C18 C17 H171 121.3  
C7 C8 H81 119.2  
C8 C7 H71 120.7  
C31 C30 H301 120.3  
C30 C31 H311 120.2  
C32 C31 H311 120.2  

Torsion Angles for R1Z

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C22 C21 C20 H201 181.5  
C21 C20 C19 H191 180.1  
C25 C26 C27 H271 179.8  
C24 C25 C26 H261 180.7  
C26 C27 C28 H281 180.0  
C23 C24 C25 H251 0.7  
C23 N5 RU1 N2 178.7  
C24 N6 C28 H281 179.6  
C24 N6 RU1 N2 23.9  
N6 C28 C27 H281 180.0  
C19 N5 RU1 N2 360.0  
N6 RU1 N5 N2 177.2  
N1 RU1 N5 N2 79.4  
N8 RU1 N5 N2 262.8  
N7 RU1 N5 N2 222.6  
N5 RU1 N2 C3 92.9  
N5 RU1 N2 C16 273.7  
C27 C28 N6 H281 180.0  
C28 N6 RU1 N2 201.3  
N5 RU1 N6 N2 340.2  
N1 RU1 N6 N2 71.6  
N8 RU1 N6 N2 244.7  
N7 RU1 N6 N2 165.2  
N6 RU1 N2 C3 73.4  
N6 RU1 N2 C16 254.2  
C15 C14 C13 H131 182.0  
C14 C15 N1 C2 359.5  
N1 C15 C14 H151 180.0  
C14 C13 C1 C2 357.1  
N1 C15 C14 H141 179.7  
C14 C15 N1 H151 180.0  
C15 N1 RU1 N2 180.6  
C1 C2 N1 C15 359.5  
C15 N1 C2 C3 180.4  
C13 C1 C2 N1 2.2  
C13 C1 C2 C3 181.3  
C13 C1 C12 C5 180.8  
N5 RU1 N1 N2 267.0  
N6 RU1 N1 N2 188.0  
N8 RU1 N1 N2 63.0  
N7 RU1 N1 N2 91.2  
N1 RU1 N2 C3 0.5  
N1 RU1 N2 C16 181.3  
C2 N1 C15 H151 179.5  
C2 N1 RU1 N2 358.4  
C1 C2 N1 C3 179.1  
N1 C2 C3 N2 358.1  
N1 C2 C3 C4 176.4  
N5 RU1 N8 N2 94.1  
N6 RU1 N8 N2 172.5  
N1 RU1 N8 N2 298.2  
N7 RU1 N8 N2 269.5  
N8 RU1 N2 C3 188.1  
N8 RU1 N2 C16 8.8  
N8 RU1 N7 C29 178.3  
N8 RU1 N7 C33 353.2  
RU1 N8 C34 C35 178.9  
N7 RU1 N2 N8 80.1  
N2 RU1 N8 C34 96.4  
N2 RU1 N7 C29 81.7  
N2 RU1 N7 C33 256.5  
C2 C3 N2 RU1 0.5  
C4 C3 N2 RU1 182.2  
C3 N2 RU1 C16 179.2  
RU1 N2 C16 H161 358.5  
N5 RU1 N7 N2 137.4  
N6 RU1 N7 N2 182.1  
N1 RU1 N7 N2 280.7  
N8 RU1 N7 N2 96.6  
N7 RU1 N8 C34 5.9  
N7 RU1 N2 C3 268.2  
N7 RU1 N2 C16 88.9  
C29 N7 RU1 C33 185.2  
RU1 N7 C29 C30 173.4  
RU1 N7 C29 H291 353.4  
RU1 N7 C33 C32 185.9  
C15 N1 C2 C1 359.5  
N1 C2 C1 C3 181.0  
C2 C1 C12 C5 1.1  
C1 C2 C3 N2 179.0  
C1 C2 C3 C4 357.3  
N4 C12 C1 C5 179.7  
C1 C12 C5 C4 358.4  
C1 C12 C5 N3 178.8  
C38 N8 RU1 N2 272.2  
C38 N8 C34 C35 2.7  
C38 C37 C36 C35 0.4  
C36 C37 C38 H371 180.0  
C38 C37 C36 H361 180.4  
C1 C2 C3 N1 180.9  
RU1 N2 C3 C2 0.5  
C4 C3 C2 N2 178.3  
C2 C3 N2 C16 179.8  
C2 C3 C4 C5 2.2  
C2 C3 C4 C18 180.9  
C34 N8 RU1 N2 96.4  
N8 C34 C35 C36 358.5  
N8 C34 C35 H351 178.5  
C1 C12 N4 C5 180.3  
C12 N4 C11 C6 359.7  
N4 C12 C5 C4 178.7  
N4 C12 C5 N3 359.1  
N4 C11 C10 C9 179.2  
C10 C11 N4 C6 178.2  
N4 C11 C10 H101 359.2  
N4 C11 C6 N3 358.6  
N4 C11 C6 C7 181.3  
C36 C37 C38 H381 180.8  
C38 C37 C36 H371 180.0  
C34 C35 C36 C37 359.9  
C35 C36 C37 H361 180.0  
C37 C36 C35 H351 180.0  
C3 C4 C5 C12 359.9  
C12 C5 C4 C18 181.3  
RU1 N2 C3 C16 180.7  
C2 C3 N2 C4 178.3  
N2 C3 C4 C5 180.4  
N2 C3 C4 C18 359.1  
C3 N2 C16 H161 179.3  
RU1 N2 C3 C4 182.2  
C2 C3 C4 N2 181.8  
C12 C5 C4 C3 359.9  
C4 C3 N2 C16 1.5  
C5 C4 C3 C18 181.3  
C3 C4 C18 C17 359.4  
C3 C4 C18 H181 179.4  
RU1 N2 C16 C3 179.2  
N2 C16 C17 H171 179.2  
N4 C11 C10 C6 181.8  
C11 C10 C9 C8 360.0  
C9 C10 C11 H101 180.0  
C11 C10 C9 H91 180.0  
C10 C11 C6 N3 180.4  
C10 C11 C6 C7 3.1  
C9 C10 C11 C6 357.4  
C11 C10 C9 H101 180.0  
C10 C9 C8 C7 2.2  
C8 C9 C10 H91 180.0  
C10 C9 C8 H81 182.2  
C6 C11 C10 C9 357.4  
C6 C11 C10 H101 177.4  
C11 C6 C7 H71 179.0  
C29 N7 RU1 N8 178.3  
C29 N7 RU1 N2 81.7  
RU1 N7 C29 C33 174.7  
C29 N7 C33 C32 1.2  
N7 C29 C30 C31 1.0  
C30 C29 N7 H291 180.0  
N7 C29 C30 H301 181.0  
C33 N7 RU1 N8 353.2  
C33 N7 RU1 N2 256.5  
RU1 N7 C33 C29 184.7  
C33 N7 C29 C30 358.7  
C33 N7 C29 H291 178.7  
N7 C33 C32 H321 179.2  
C12 C5 C4 N3 180.3  
C5 C4 C3 N2 180.4  
C3 C4 C5 C18 178.6  
C5 C4 C18 C17 178.0  
C5 C4 C18 H181 358.0  
C12 C5 N3 C4 179.7  
C3 C4 C5 N3 179.6  
RU1 N8 C34 C33 355.8  
C34 C33 C32 H321 358.5  
C37 C36 C35 C34 359.9  
C34 C35 C36 H361 179.9  
C36 C35 C34 H351 180.0  
C35 C36 C37 H371 180.5  
C37 C36 C35 H361 180.0  
C34 C35 C36 H351 180.0  
C18 C4 C3 N2 359.1  
C3 C4 C18 C5 181.4  
C17 C18 C4 H181 180.0  
C4 C18 C17 H171 181.4  
C30 C29 N7 C33 358.7  
N7 C29 C30 H291 180.0  
C31 C30 C29 H301 180.0  
C29 C30 C31 H311 179.4  
RU1 N2 C16 C17 178.5  
C3 N2 C16 C17 359.3  
C16 C17 C18 H181 181.4  
C18 C17 C16 H171 180.0  
C8 C9 C10 H101 180.0  
C10 C9 C8 H91 180.0  
C7 C8 C9 H81 180.0  
C9 C8 C7 H71 178.3  
C33 C32 C31 H311 180.5  
C12 C5 N3 C6 359.2  
C11 C6 N3 C7 182.7  
N3 C6 C7 H71 1.7  
C11 C6 C7 N3 177.4  
C6 C7 C8 H81 178.4  
C8 C7 C6 H71 180.0  
C4 C18 C17 H181 180.0  
C16 C17 C18 H171 180.0  
C11 C6 C7 C8 359.0  
C7 C8 C9 H91 182.2  
C9 C8 C7 H81 180.0  
C6 C7 C8 H71 180.0  
C31 C30 C29 H291 181.0  
C29 C30 C31 H301 180.0  
C32 C31 C30 H311 180.0  
N7 C33 C32 C31 359.2  
C32 C31 C30 H301 179.4  
C30 C31 C32 H311 180.0  
H291 C29 N7 C33 178.7  
N7 C29 H291 C30 180.0  
H291 C29 C30 C31 181.0  
H291 C29 C30 H301 1.0  
C29 C30 H301 C31 180.0  
H301 C30 C29 H291 1.0  
H301 C30 C31 H311 359.4  
H311 C31 C30 H301 359.4  
H321 C32 C31 H311 0.5  
H381 C38 C37 C36 180.8  
H381 C38 C37 H371 0.8  
C38 C37 H371 C36 180.0  
H371 C37 C38 H381 0.8  
H371 C37 C36 C35 180.5  
H371 C37 C36 H361 0.5  
C37 C36 H361 C35 180.0  
H361 C36 C37 H371 0.5  
H361 C36 C35 H351 360.0  
C34 C35 H351 C36 180.0  
H351 C35 C36 H361 360.0  
H271 C27 C28 H281 0.0  
H261 C26 C27 H271 359.8  
H251 C25 C26 H261 0.7  
H201 C20 C19 H191 0.1  
H211 C21 C22 H221 358.7  
H211 C21 C20 H201 1.5  
H221 C22 C21 H211 358.7  
C11 C10 H101 C9 180.0  
H101 C10 C11 C6 177.4  
H101 C10 C9 C8 180.0  
H101 C10 C9 H91 360.0  
H131 C13 C1 C2 177.1  
H141 C14 C15 N1 179.7  
H141 C14 C15 H151 359.7  
H141 C14 C13 H131 2.0  
C14 C15 H151 N1 180.0  
H151 C15 C14 H141 359.7  
H151 C15 N1 C2 179.5  
C10 C9 H91 C8 180.0  
H91 C9 C10 H101 360.0  
H91 C9 C8 C7 182.2  
H91 C9 C8 H81 2.2  
C9 C8 H81 C7 180.0  
H81 C8 C9 H91 2.2  
H81 C8 C7 H71 358.3  
H71 C7 C8 H81 358.3  
C4 C18 H181 C17 180.0  
H181 C18 C17 H171 1.4  
H171 C17 C18 H181 1.4  
H161 C16 C17 H171 359.2