PDB Chemical Component R

Ideal Model

Chemical Description

Name 2'-DEOXY-N6-(R)STYRENE OXIDE ADENOSINE MONOPHOSPHATE
Formula C18 H22 N5 O7 P
Formal charge 0
Molecular weight 451.370 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 53
Chiral atom count 4
Chiral atoms C4' C3' C1' CA
Observed leaving atoms OP3 HO3'
Bond count 56
Aromatic bond count 16

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-N-[(1R)-2-hydroxy-1-phenylethyl]adenosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-[6-[[(1R)-2-hydroxy-1-phenyl-ethyl]amino]purin-9-yl]oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H](Nc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)c4ccccc4
SMILES (CACTVS) OC[CH](Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)c4ccccc4
Stereo SMILES (OpenEye) c1ccc(cc1)[C@H](CO)Nc2c3c(ncn2)n(cn3)[C@H]4C[C@@H]([C@H](O4)COP(=O)(O)O)O
InChI descriptor InChI=1S/C18H22N5O7P/c24-7-12(11-4-2-1-3-5-11)22-17-16-18(20-9-19-17)23(10-21-16)15-6-13(25)14(30-15)8-29-31(26,27)28/h1-5,9-10,12-15,24-25H,6-8H2,(H,19,20,22)(H2,26,27,28)/t12-,13-,14+,15+/m0/s1
InChIKey descriptor GPBCZRLFTIFYIP-BYNSBNAKSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1AGZ
Processing site RCSB