PDB Chemical Component QUO

Ideal Model

Chemical Description

Name 2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE
Formula C17 H26 N5 O10 P
Formal charge 0
Molecular weight 491.390 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 59
Chiral atom count 7
Chiral atoms C4' C1' C12 C13 C14 C2' C3'
Observed leaving atoms OP3 HO3'
Bond count 62
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-5-({[(1R,2S,3R)-2,3-dihydroxycyclopentyl]amino}methyl)-7-(5-O-phosphono-beta-D-ribofuranosyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-[2-amino-5-[[[(1R,2S,3R)-2,3-dihydroxycyclopentyl]amino]methyl]-4-oxo-3H-pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cc(CN[C@@H]3CC[C@@H](O)[C@H]3O)c2C(=O)N1)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O
SMILES (CACTVS) NC1=Nc2n(cc(CN[CH]3CC[CH](O)[CH]3O)c2C(=O)N1)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O
Stereo SMILES (OpenEye) c1c(c2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=C(NC2=O)N)CN[C@@H]4CC[C@H]([C@H]4O)O
InChI descriptor InChI=1S/C17H26N5O10P/c18-17-20-14-10(15(27)21-17)6(3-19-7-1-2-8(23)11(7)24)4-22(14)16-13(26)12(25)9(32-16)5-31-33(28,29)30/h4,7-9,11-13,16,19,23-26H,1-3,5H2,(H2,28,29,30)(H3,18,20,21,27)/t7-,8-,9-,11+,12-,13-,16-/m1/s1
InChIKey descriptor VYTHZZVQRUCDCO-LXGXKJLISA-N

Status Information

Last modified 2011-06-04
Created 1999-07-20
Release status REL
Model PDB code 1C0A
Processing site RCSB