PDB Chemical Component QUG

Ideal Model

Chemical Description

Name 2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one
Synonyms Queuine
Formula C12 H15 N5 O3
Formal charge 0
Molecular weight 277.279 g/mol
Component type NON-POLYMER

Chemical features

Atom count 35
Chiral atom count 3
Chiral atoms C6 C7 C8
Bond count 37
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one
Systematic name (OpenEye OEToolkits) 2-azanyl-5-[[[(1~{S},4~{S},5~{S})-4,5-bis(oxidanyl)cyclopent-2-en-1-yl]amino]methyl]-1,7-dihydropyrrolo[2,3-d]pyrimidin-4-one

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)c2c(CN[C@H]3C=C[C@H](O)[C@H]3O)c[nH]c2N1
SMILES (CACTVS) NC1=NC(=O)c2c(CN[CH]3C=C[CH](O)[CH]3O)c[nH]c2N1
Stereo SMILES (OpenEye) c1c(c2c([nH]1)NC(=NC2=O)N)CN[C@H]3C=C[C@@H]([C@H]3O)O
InChI descriptor InChI=1S/C12H15N5O3/c13-12-16-10-8(11(20)17-12)5(4-15-10)3-14-6-1-2-7(18)9(6)19/h1-2,4,6-7,9,14,18-19H,3H2,(H4,13,15,16,17,20)/t6-,7-,9-/m0/s1
InChIKey descriptor WYROLENTHWJFLR-ZKWXMUAHSA-N

Status Information

Last modified 2020-06-17
Created 2019-06-06
Release status REL
Model PDB code 6P78
Processing site RCSB