PDB Chemical Component QLP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for QLP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OXT C 1.232 1.226
C CA 1.522 1.520
C O 1.239 1.354
O HO 0.950 0.980
CA N 1.492 1.441
CA CB 1.511 1.534
CA HA 1.100 1.096
CB CG 1.544 1.531
CB HB1 1.100 1.098
CB HB2 1.100 1.098
CG CD 1.504 1.512
CG HG1 1.100 1.096
CG HG2 1.100 1.095
CD NE2 1.350 1.376
CD OE1 1.231 1.228
NE2 HE21 1.000 1.015
NE2 HE22 1.000 1.015
N C4A 1.480 1.462
N HN 1.000 1.026
C4A C4 1.555 1.501
C4A H4A1 1.101 1.095
C4A H4A2 1.100 1.096
C4 C5 1.396 1.388
C4 C3 1.403 1.387
C5 C6 1.413 1.385
C5 C5A 1.522 1.489
C5A O4P 1.442 1.423
C5A H5A1 1.100 1.099
C5A H5A2 1.100 1.100
O4P P 1.630 1.616
P O3P 1.507 1.501
P O1P 1.528 1.616
P O2P 1.465 1.617
O2P HO2P 0.950 0.981
O1P HO1P 0.950 0.981
C6 N1 1.360 1.352
C6 H6 1.080 1.086
N1 C2 1.349 1.352
C2 C2A 1.527 1.493
C2 C3 1.412 1.386
C2A H2A1 1.100 1.096
C2A H2A2 1.100 1.098
C2A H2A3 1.100 1.096
C3 O3 1.262 1.359
O3 HO3 0.950 0.971

Bond Angles for QLP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OXT C CA 121.3 122.9
OXT C O 120.8 122.3
O C CA 117.8 114.7
C CA N 113.8 112.6
C CA CB 104.6 111.0
C CA HA 109.4 106.8
C O HO 109.5 115.0
CB CA N 107.9 111.4
N CA HA 106.2 105.5
CA N C4A 128.9 111.5
CA N HN 103.4 110.0
CB CA HA 115.1 109.3
CA CB CG 105.4 113.9
CA CB HB1 110.9 109.2
CA CB HB2 111.7 109.2
CG CB HB1 110.9 109.2
CG CB HB2 111.8 108.9
CB CG CD 110.2 110.6
CB CG HG1 109.2 111.0
CB CG HG2 109.1 111.1
HB1 CB HB2 106.4 106.1
CD CG HG1 109.2 108.8
CD CG HG2 109.1 107.9
CG CD NE2 117.3 113.5
CG CD OE1 118.7 122.4
HG1 CG HG2 110.0 107.2
NE2 CD OE1 124.0 124.0
CD NE2 HE21 107.7 118.8
CD NE2 HE22 126.1 122.3
HE21 NE2 HE22 126.1 118.8
C4A N HN 103.4 108.5
N C4A C4 113.6 112.0
N C4A H4A1 108.1 107.9
N C4A H4A2 107.2 107.8
C4 C4A H4A1 108.1 110.7
C4 C4A H4A2 107.2 111.0
C4A C4 C5 120.8 120.0
C4A C4 C3 122.8 119.8
H4A1 C4A H4A2 112.8 107.3
C5 C4 C3 116.4 120.2
C4 C5 C6 121.4 117.6
C4 C5 C5A 120.7 122.2
C4 C3 C2 121.0 117.7
C4 C3 O3 119.8 121.3
C5A C5 C6 117.8 120.1
C5 C6 N1 120.2 124.1
C5 C6 H6 119.9 121.3
C5 C5A O4P 108.2 109.5
C5 C5A H5A1 109.9 111.5
C5 C5A H5A2 110.2 111.2
O4P C5A H5A1 109.9 108.6
O4P C5A H5A2 110.1 108.7
C5A O4P P 122.4 118.3
H5A1 C5A H5A2 108.5 107.3
O4P P O3P 108.4 115.1
O4P P O1P 102.6 102.7
O4P P O2P 106.3 103.8
O3P P O1P 113.7 115.0
O3P P O2P 113.8 115.3
O2P P O1P 111.2 103.3
P O1P HO1P 109.5 119.0
P O2P HO2P 109.5 118.9
N1 C6 H6 119.9 114.7
C6 N1 C2 120.3 116.4
N1 C2 C2A 118.8 115.9
N1 C2 C3 120.7 124.0
C2A C2 C3 120.4 120.1
C2 C2A H2A1 109.5 110.3
C2 C2A H2A2 109.5 111.2
C2 C2A H2A3 109.5 111.2
C2 C3 O3 119.2 121.1
H2A1 C2A H2A2 109.5 108.6
H2A1 C2A H2A3 109.4 108.6
H2A2 C2A H2A3 109.5 106.9
C3 O3 HO3 109.5 110.4

Torsion Angles for QLP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O C OXT CA 176.8 177.6
OXT C CA N 6.0 295.3
OXT C CA CB 123.6 61.0
OXT C CA HA 247.4 180.0
OXT C O HO 0.0 360.0
OXT C CA O 176.9 177.8
CA C O HO 177.0 177.8
CB CA C N 117.6 125.7
N CA C HA 118.6 115.3
C CA N C4A 198.5 300.4
C CA N HN 78.5 180.0
CB CA C HA 236.2 241.0
C CA CB CG 286.4 62.5
C CA CB HB1 166.4 300.1
C CA CB HB2 47.9 184.5
OXT C O CA 183.1 182.2
O C CA N 189.1 117.5
O C CA CB 306.6 243.2
O C CA HA 70.5 2.2
HO O C CA 177.0 177.8
C CA N CB 115.6 125.5
C CA N HA 239.6 243.9
CB CA N HA 123.9 118.5
N CA CB CG 47.8 188.9
N CA CB HB1 287.9 66.4
N CA CB HB2 169.4 310.8
C4A N CA HN 120.0 120.4
CA N C4A C4 157.2 178.7
CA N C4A H4A1 37.2 56.6
CA N C4A H4A2 275.4 301.1
C CA CB N 238.5 233.6
C CA CB HA 120.1 117.5
N CA CB HA 241.6 243.9
CB CA N C4A 82.8 175.0
CB CA N HN 322.8 54.6
CG CB CA HB1 120.0 122.4
CG CB CA HB2 238.4 238.0
CA CB CG CD 202.5 177.6
CA CB CG HG1 82.6 298.5
CA CB CG HG2 322.2 57.7
HB1 CB CA HB2 118.4 115.6
C CA HA N 123.2 120.0
C CA HA CB 242.6 239.9
CB CA HA N 240.6 240.1
HA CA N C4A 318.9 56.5
HA CA N HN 198.9 296.1
HA CA CB CG 166.3 305.0
HA CA CB HB1 46.3 182.6
HA CA CB HB2 287.8 67.0
CG CB CA N 47.8 188.9
CG CB CA HA 166.3 305.0
CA CB CG HB1 240.0 237.6
CA CB CG HB2 121.6 122.1
HB1 CB CG HB2 241.5 244.6
CD CG CB HG1 120.0 239.1
CD CG CB HG2 240.3 119.8
CB CG CD NE2 175.8 180.0
CB CG CD OE1 355.9 0.7
HG1 CG CB HG2 120.3 240.8
HB1 CB CA N 287.9 66.4
HB1 CB CA HA 46.3 182.6
CA CB HB1 CG 116.6 125.2
CA CB HB1 HB2 238.3 242.4
CG CB HB1 HB2 121.7 117.2
HB1 CB CG CD 322.5 300.0
HB1 CB CG HG1 202.5 60.9
HB1 CB CG HG2 82.2 180.2
HB2 CB CA N 169.4 310.8
HB2 CB CA HA 287.8 67.0
CA CB HB2 CG 242.2 235.1
CA CB HB2 HB1 121.1 117.6
CG CB HB2 HB1 238.9 242.5
HB2 CB CG CD 81.0 55.4
HB2 CB CG HG1 321.0 176.4
HB2 CB CG HG2 200.7 295.6
CD CG CB HB1 322.5 300.0
CD CG CB HB2 81.0 55.4
CB CG CD HG1 240.0 122.2
CB CG CD HG2 119.7 238.3
HG1 CG CD HG2 239.7 116.0
NE2 CD CG OE1 179.9 179.3
CG CD NE2 HE21 360.0 180.5
CG CD NE2 HE22 180.0 0.6
HG1 CG CB HB1 202.5 60.9
HG1 CG CB HB2 321.0 176.4
CB CG HG1 CD 120.6 238.0
CB CG HG1 HG2 240.3 121.5
CD CG HG1 HG2 119.7 243.5
HG1 CG CD NE2 295.8 57.8
HG1 CG CD OE1 115.9 238.5
HG2 CG CB HB1 82.2 180.2
HG2 CG CB HB2 200.7 295.6
CB CG HG2 CD 239.6 121.4
CB CG HG2 HG1 119.8 238.5
CD CG HG2 HG1 240.2 117.1
HG2 CG CD NE2 56.1 301.8
HG2 CG CD OE1 236.2 122.5
NE2 CD CG HG1 295.8 57.8
NE2 CD CG HG2 56.1 301.8
CG CD NE2 OE1 180.1 180.7
HE21 NE2 CD HE22 180.0 179.9
OE1 CD CG HG1 115.9 238.5
OE1 CD CG HG2 236.2 122.5
CG CD OE1 NE2 179.9 179.2
OE1 CD NE2 HE21 179.9 359.8
OE1 CD NE2 HE22 359.9 179.9
HE21 NE2 CD OE1 179.9 359.8
CD NE2 HE21 HE22 180.0 180.1
HE22 NE2 CD OE1 359.9 179.9
CD NE2 HE22 HE21 180.0 179.9
C4A N CA HA 318.9 56.5
CA N C4A HN 240.0 238.7
C4 C4A N H4A1 120.0 122.1
C4 C4A N H4A2 241.8 237.7
N C4A C4 C5 132.4 270.0
N C4A C4 C3 313.5 90.0
H4A1 C4A N H4A2 121.8 115.6
HN N CA HA 198.9 296.1
CA N HN C4A 136.1 122.2
HN N C4A C4 277.2 300.0
HN N C4A H4A1 157.2 177.9
HN N C4A H4A2 35.4 62.4
C4 C4A N HN 277.2 300.0
N C4A C4 H4A1 240.0 239.5
N C4A C4 H4A2 118.2 120.5
H4A1 C4A C4 H4A2 238.2 241.0
C5 C4 C4A C3 178.9 180.0
C4A C4 C5 C6 182.8 180.0
C4A C4 C5 C5A 359.6 0.0
C4A C4 C3 C2 178.5 180.0
C4A C4 C3 O3 359.4 360.0
H4A1 C4A N HN 157.2 177.9
N C4A H4A1 C4 123.4 122.9
N C4A H4A1 H4A2 241.7 244.1
C4 C4A H4A1 H4A2 118.3 121.2
H4A1 C4A C4 C5 252.4 30.5
H4A1 C4A C4 C3 73.5 210.5
H4A2 C4A N HN 35.4 62.4
N C4A H4A2 C4 237.7 237.1
N C4A H4A2 H4A1 118.8 116.0
C4 C4A H4A2 H4A1 241.1 238.9
H4A2 C4A C4 C5 14.2 149.5
H4A2 C4A C4 C3 195.3 329.5
C5 C4 C4A H4A1 252.4 30.5
C5 C4 C4A H4A2 14.2 149.5
C4A C4 C5 C3 181.0 180.0
C5 C4 C3 C2 359.5 0.0
C5 C4 C3 O3 180.5 180.0
C5A C5 C4 C6 176.8 180.0
C4 C5 C6 N1 356.6 0.1
C4 C5 C6 H6 176.6 180.0
C4 C5 C5A O4P 85.5 270.0
C4 C5 C5A H5A1 205.5 30.2
C4 C5 C5A H5A2 325.0 149.9
C3 C4 C4A H4A1 73.5 210.5
C3 C4 C4A H4A2 195.3 329.5
C4A C4 C3 C5 178.9 180.0
C3 C4 C5 C6 1.8 359.9
C3 C4 C5 C5A 178.6 180.0
N1 C2 C3 C4 0.8 360.0
C2A C2 C3 C4 178.4 180.0
C2 C3 C4 O3 179.0 180.0
C4 C3 O3 HO3 164.2 203.0
C6 C5 C4 C3 1.8 359.9
C4 C5 C6 C5A 176.9 180.0
C6 C5 C5A O4P 262.4 90.0
C6 C5 C5A H5A1 22.4 210.2
C6 C5 C5A H5A2 141.9 329.9
N1 C6 C5 H6 180.0 180.0
C5 C6 N1 C2 3.6 360.0
C5A C5 C4 C3 178.6 180.0
C4 C5 C5A C6 183.1 180.0
C5A C5 C6 N1 179.7 180.0
C5A C5 C6 H6 359.7 360.0
O4P C5A C5 H5A1 240.0 239.8
O4P C5A C5 H5A2 120.5 120.1
C5 C5A O4P P 181.8 180.0
H5A1 C5A C5 H5A2 240.5 240.3
O4P C5A C5 C6 262.4 90.0
C5 C5A O4P H5A1 120.0 122.0
C5 C5A O4P H5A2 239.5 238.3
H5A1 C5A O4P H5A2 119.5 116.4
C5A O4P P O3P 321.8 180.0
C5A O4P P O1P 201.2 305.7
C5A O4P P O2P 84.4 53.1
H5A1 C5A C5 C6 22.4 210.2
C5 C5A H5A1 O4P 241.0 239.3
C5 C5A H5A1 H5A2 120.5 122.0
O4P C5A H5A1 H5A2 239.5 242.7
H5A1 C5A O4P P 61.8 58.1
H5A2 C5A C5 C6 141.9 329.9
C5 C5A H5A2 O4P 119.3 120.6
C5 C5A H5A2 H5A1 239.7 237.8
O4P C5A H5A2 H5A1 120.3 117.2
H5A2 C5A O4P P 302.3 301.7
P O4P C5A H5A1 61.8 58.1
P O4P C5A H5A2 302.3 301.7
O3P P O4P O1P 120.6 234.3
O3P P O4P O2P 237.4 126.9
O2P P O4P O1P 243.2 107.4
O4P P O1P HO1P 58.7 186.3
O4P P O2P HO2P 109.4 175.6
O4P P O3P O1P 246.6 119.1
O4P P O3P O2P 118.0 239.2
O2P P O3P O1P 128.7 240.0
O3P P O1P HO1P 301.8 312.1
O3P P O2P HO2P 228.6 48.8
O4P P O1P O3P 116.8 234.2
O4P P O1P O2P 246.8 107.8
O3P P O1P O2P 130.0 233.5
O1P P O2P HO2P 358.5 282.5
O4P P O2P O3P 240.8 126.8
O4P P O2P O1P 110.9 253.1
O3P P O2P O1P 230.0 126.3
O2P P O1P HO1P 171.9 78.5
HO2P O2P P O1P 358.5 282.5
C5 C6 N1 H6 180.0 180.0
C6 N1 C2 C2A 180.0 180.0
C6 N1 C2 C3 357.7 0.0
C5 C6 H6 N1 180.0 180.0
H6 C6 N1 C2 183.6 180.0
C4 C3 C2 N1 0.8 360.0
C2 N1 C6 H6 183.6 180.0
C2A C2 N1 C3 182.3 180.0
N1 C2 C2A H2A1 340.2 279.4
N1 C2 C2A H2A2 100.3 39.9
N1 C2 C2A H2A3 220.3 158.9
N1 C2 C3 O3 179.8 180.0
C4 C3 C2 C2A 178.4 180.0
N1 C2 C2A C3 177.7 180.0
C2A C2 C3 O3 357.4 0.1
H2A1 C2A C2 H2A2 240.0 239.5
H2A1 C2A C2 H2A3 120.0 120.6
H2A2 C2A C2 H2A3 240.0 241.1
C4 C3 C2 O3 181.0 180.0
N1 C2 C3 C2A 182.4 180.0
C3 C2 C2A H2A1 162.6 99.4
C3 C2 C2A H2A2 282.6 219.9
C3 C2 C2A H2A3 42.6 338.8
C2 C3 O3 HO3 345.2 23.0
H2A1 C2A C2 C3 162.6 99.4
C2 C2A H2A1 H2A2 120.0 122.0
C2 C2A H2A1 H2A3 240.0 237.9
H2A2 C2A H2A1 H2A3 120.0 115.9
H2A2 C2A C2 C3 282.6 219.9
C2 C2A H2A2 H2A1 240.0 238.5
C2 C2A H2A2 H2A3 120.0 121.5
H2A1 C2A H2A2 H2A3 240.0 243.0
H2A3 C2A C2 C3 42.6 338.8
C2 C2A H2A3 H2A1 120.0 121.6
C2 C2A H2A3 H2A2 240.0 238.5
H2A1 C2A H2A3 H2A2 120.0 117.0
C4 C3 O3 C2 179.0 180.0