PDB Chemical Component QJE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for QJE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O C 1.431 1.429
C C1 1.556 1.530
C1 C2 1.560 1.530
C2 O1 1.439 1.429
O1 C3 1.385 1.429
C3 C4 1.540 1.530
O2 C4 1.415 1.429
C H1 1.100 1.090
C H2 1.100 1.089
O H3 0.950 0.967
C1 H4 1.100 1.090
C1 H5 1.100 1.091
C2 H6 1.101 1.090
C2 H7 1.100 1.089
C3 H8 1.100 1.090
C3 H9 1.100 1.090
C4 H10 1.100 1.091
C4 H11 1.100 1.089
O2 C5   1.429
C5 C6   1.531
C6 O3   1.429
O3 C8   1.429
C8 C9   1.530
C9 O4   1.429
O4 C11   1.429
C11 C12   1.530
C12 O5   1.429
O5 C14   1.430
C14 C15   1.529
C15 O6   1.429
O6 C17   1.429
C17 C18   1.530
C18 N1   1.469
C5 H12   1.090
C5 H13   1.090
C6 H14   1.090
C6 H15   1.089
C8 H16   1.091
C8 H17   1.090
C9 H18   1.090
C9 H19   1.089
C11 H20   1.090
C11 H21   1.090
C12 H22   1.090
C12 H23   1.090
C14 H24   1.090
C14 H25   1.090
C15 H26   1.090
C15 H27   1.090
C17 H28   1.090
C17 H29   1.090
C18 H30   1.089
C18 H31   1.090
N1 H32   1.009
N1 H33   1.009

Bond Angles for QJE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O C C1 109.8 109.5
O C H1 109.4 109.4
O C H2 109.4 109.5
C C1 C2 111.5 109.5
C1 C H1 109.4 109.4
C1 C H2 109.4 109.5
C C1 H4 109.0 109.4
C C1 H5 108.9 109.5
C1 C2 O1 110.0 109.5
C2 C1 H4 109.0 109.5
C2 C1 H5 109.0 109.5
C1 C2 H6 109.3 109.4
C1 C2 H7 109.4 109.5
C2 O1 C3 112.8 114.0
O1 C2 H6 109.3 109.5
O1 C2 H7 109.4 109.5
O1 C3 H8 109.6 109.4
O1 C3 H9 109.6 109.5
C4 C3 H8 109.6 109.5
C4 C3 H9 109.6 109.5
C3 C4 H10 109.6 109.4
C3 C4 H11 109.6 109.5
O2 C4 H10 109.6 109.5
O2 C4 H11 109.6 109.5
H1 C H2 109.5 109.5
H4 C1 H5 109.5 109.4
H6 C2 H7 109.5 109.5
H8 C3 H9 109.5 109.5
H10 C4 H11 109.5 109.4
O2 C5 C6   109.4
O2 C5 H12   109.5
O2 C5 H13   109.4
C5 C6 O3   109.4
C6 C5 H12   109.5
C6 C5 H13   109.5
C5 C6 H14   109.4
C5 C6 H15   109.5
C6 O3 C8   114.0
O3 C6 H14   109.4
O3 C6 H15   109.5
O3 C8 C9   109.5
O3 C8 H16   109.4
O3 C8 H17   109.5
C8 C9 O4   109.5
C9 C8 H16   109.5
C9 C8 H17   109.5
C8 C9 H18   109.5
C8 C9 H19   109.4
C9 O4 C11   114.0
O4 C9 H18   109.5
O4 C9 H19   109.5
O4 C11 C12   109.5
O4 C11 H20   109.5
O4 C11 H21   109.5
C11 C12 O5   109.4
C12 C11 H20   109.5
C12 C11 H21   109.4
C11 C12 H22   109.5
C11 C12 H23   109.5
C12 O5 C14   114.0
O5 C12 H22   109.5
O5 C12 H23   109.5
O5 C14 C15   109.5
O5 C14 H24   109.4
O5 C14 H25   109.4
C14 C15 O6   109.5
C15 C14 H24   109.5
C15 C14 H25   109.5
C14 C15 H26   109.5
C14 C15 H27   109.5
C15 O6 C17   114.0
O6 C15 H26   109.5
O6 C15 H27   109.4
O6 C17 C18   109.5
O6 C17 H28   109.5
O6 C17 H29   109.4
C17 C18 N1   109.4
C18 C17 H28   109.5
C18 C17 H29   109.5
C17 C18 H30   109.5
C17 C18 H31   109.4
N1 C18 H30   109.5
N1 C18 H31   109.4
C18 N1 H32   111.0
C18 N1 H33   111.0
H12 C5 H13   109.5
H14 C6 H15   109.5
H16 C8 H17   109.4
H18 C9 H19   109.5
H20 C11 H21   109.5
H22 C12 H23   109.5
H24 C14 H25   109.4
H26 C15 H27   109.4
H28 C17 H29   109.5
H30 C18 H31   109.5
H32 N1 H33   111.0

Torsion Angles for QJE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O C C1 C2 280.8 180.0
C1 C O H1 240.0 240.0
C1 C O H2 120.1 120.0
O C C1 H4 41.1 300.0
O C C1 H5 160.5 60.0
H1 C O H2 240.1 240.0
O C C1 H1 120.1 120.0
O C C1 H2 239.9 240.0
C C1 C2 O1 348.6 180.0
C2 C1 C H4 239.7 240.0
C2 C1 C H5 120.3 120.0
C C1 C2 H6 108.7 300.0
C C1 C2 H7 228.5 60.0
H1 C C1 H2 119.9 120.0
H4 C1 C H5 240.6 240.1
C2 C1 C H1 160.7 60.0
C2 C1 C H2 40.8 300.0
C C1 C2 H4 120.3 120.0
C C1 C2 H5 239.7 240.0
C1 C2 O1 C3 166.9 180.0
O1 C2 C1 H6 239.9 240.0
O1 C2 C1 H7 120.1 120.0
H4 C1 C2 H5 119.4 120.0
H6 C2 C1 H7 240.2 240.0
O1 C2 C1 H4 228.3 60.0
O1 C2 C1 H5 108.9 300.0
C1 C2 O1 H6 120.1 120.0
C1 C2 O1 H7 239.9 240.0
C2 O1 C3 H8 275.7 60.0
C2 O1 C3 H9 35.9 300.0
H6 C2 O1 H7 119.8 120.1
C3 O1 C2 H6 46.8 60.0
C3 O1 C2 H7 287.0 299.9
C4 C3 O1 H8 240.1 120.0
C4 C3 O1 H9 119.9 240.0
O1 C3 C4 H10 243.7 185.0
O1 C3 C4 H11 3.8 305.0
H8 C3 O1 H9 239.8 120.0
C2 O1 C3 C4 155.8 180.0
O1 C3 C4 H8 119.9 240.1
O1 C3 C4 H9 240.1 120.0
O2 C4 C3 H10 240.1 240.0
O2 C4 C3 H11 119.9 120.1
H8 C3 C4 H9 120.2 240.0
H10 C4 C3 H11 239.8 240.0
O2 C4 C3 H8 3.8 185.0
O2 C4 C3 H9 243.6 305.0
C3 C4 O2 H10 119.9 119.9
C3 C4 O2 H11 240.1 239.9
H10 C4 O2 H11 120.2 120.0
O C H1 C1 239.7 240.0
O C H1 H2 119.9 120.0
H1 C C1 C2 160.7 60.0
C1 C H1 H2 240.2 240.0
H1 C C1 H4 281.0 180.1
H1 C C1 H5 40.4 300.0
O C H2 C1 120.3 120.0
O C H2 H1 240.1 240.0
H2 C C1 C2 40.8 300.0
C1 C H2 H1 119.8 120.0
H2 C C1 H4 161.2 60.1
H2 C C1 H5 280.5 180.0
H3 O C C1 180.0 180.0
H3 O C H1 300.0 300.0
H3 O C H2 60.0 60.0
C C1 H4 C2 238.1 240.0
H4 C1 C H1 281.0 180.1
H4 C1 C H2 161.2 60.1
C C1 H4 H5 119.0 120.0
H4 C1 C2 O1 228.3 60.0
C2 C1 H4 H5 240.9 240.0
H4 C1 C2 H6 348.3 180.0
H4 C1 C2 H7 108.2 300.0
C C1 H5 C2 121.9 120.0
H5 C1 C H1 40.4 300.0
H5 C1 C H2 280.5 180.0
C C1 H5 H4 240.9 240.1
H5 C1 C2 O1 108.9 300.0
C2 C1 H5 H4 119.1 120.0
H5 C1 C2 H6 229.0 60.0
H5 C1 C2 H7 348.8 180.0
C1 C2 H6 O1 239.5 240.0
H6 C2 C1 H4 348.3 180.0
H6 C2 C1 H5 229.0 60.0
C1 C2 H6 H7 119.8 120.0
H6 C2 O1 C3 46.8 60.0
O1 C2 H6 H7 240.2 240.0
C1 C2 H7 O1 120.5 120.0
H7 C2 C1 H4 108.2 300.0
H7 C2 C1 H5 348.8 180.0
C1 C2 H7 H6 240.2 240.0
H7 C2 O1 C3 287.0 299.9
O1 C2 H7 H6 119.8 120.0
O1 C3 H8 H9 120.3 240.0
C4 C3 H8 H9 239.7 120.0
H8 C3 C4 H10 123.7 305.0
H8 C3 C4 H11 243.9 64.9
O1 C3 H9 H8 239.7 120.0
C4 C3 H9 H8 120.3 240.0
H9 C3 C4 H10 3.6 65.0
H9 C3 C4 H11 123.7 185.0
H10 C4 C3 H8 123.7 305.0
H10 C4 C3 H9 3.6 65.0
C3 C4 H10 H11 120.3 120.0
O2 C4 H10 H11 239.7 240.0
H11 C4 C3 H8 243.9 64.9
H11 C4 C3 H9 123.7 185.0
C3 C4 H11 H10 239.7 240.1
O2 C4 H11 H10 120.3 120.0
C5 O2 C4 H10   60.0
C5 O2 C4 H11   300.0
O2 C5 C6 O3   65.1
C6 C5 O2 H12   239.9
C6 C5 O2 H13   119.9
O2 C5 C6 H14   185.0
O2 C5 C6 H15   305.0
H12 C5 O2 H13   240.0
O2 C5 C6 H12   120.1
O2 C5 C6 H13   240.1
C5 C6 O3 C8   180.0
O3 C6 C5 H14   240.1
O3 C6 C5 H15   120.0
H12 C5 C6 H13   120.0
H14 C6 C5 H15   239.9
O3 C6 C5 H12   305.0
O3 C6 C5 H13   185.0
C5 C6 O3 H14   119.9
C5 C6 O3 H15   240.0
C6 O3 C8 C9   180.0
C6 O3 C8 H16   299.9
C6 O3 C8 H17   59.9
H14 C6 O3 H15   120.1
C8 O3 C6 H14   60.1
C8 O3 C6 H15   300.0
O3 C8 C9 O4   65.0
C9 C8 O3 H16   240.0
C9 C8 O3 H17   120.1
O3 C8 C9 H18   185.0
O3 C8 C9 H19   305.0
H16 C8 O3 H17   240.0
O3 C8 C9 H16   119.9
O3 C8 C9 H17   239.9
C8 C9 O4 C11   180.0
O4 C9 C8 H18   240.0
O4 C9 C8 H19   120.0
H16 C8 C9 H17   120.0
H18 C9 C8 H19   240.0
O4 C9 C8 H16   305.0
O4 C9 C8 H17   185.0
C8 C9 O4 H18   120.0
C8 C9 O4 H19   240.0
C9 O4 C11 C12   180.0
C9 O4 C11 H20   300.0
C9 O4 C11 H21   60.0
H18 C9 O4 H19   120.0
C11 O4 C9 H18   60.0
C11 O4 C9 H19   300.0
O4 C11 C12 O5   65.0
C12 C11 O4 H20   240.0
C12 C11 O4 H21   120.0
O4 C11 C12 H22   185.0
O4 C11 C12 H23   305.0
H20 C11 O4 H21   240.0
O4 C11 C12 H20   120.0
O4 C11 C12 H21   240.0
C11 C12 O5 C14   180.0
O5 C12 C11 H22   240.0
O5 C12 C11 H23   120.0
H20 C11 C12 H21   120.0
H22 C12 C11 H23   240.0
O5 C12 C11 H20   305.0
O5 C12 C11 H21   185.0
C11 C12 O5 H22   120.0
C11 C12 O5 H23   240.0
C12 O5 C14 C15   180.0
C12 O5 C14 H24   300.1
C12 O5 C14 H25   60.0
H22 C12 O5 H23   120.0
C14 O5 C12 H22   60.0
C14 O5 C12 H23   300.0
O5 C14 C15 O6   65.0
C15 C14 O5 H24   239.9
C15 C14 O5 H25   120.0
O5 C14 C15 H26   185.0
O5 C14 C15 H27   305.0
H24 C14 O5 H25   240.1
O5 C14 C15 H24   120.0
O5 C14 C15 H25   240.0
C14 C15 O6 C17   180.0
O6 C15 C14 H26   240.0
O6 C15 C14 H27   120.0
H24 C14 C15 H25   120.0
H26 C15 C14 H27   240.0
O6 C15 C14 H24   305.0
O6 C15 C14 H25   185.0
C14 C15 O6 H26   120.1
C14 C15 O6 H27   240.0
C15 O6 C17 C18   180.0
C15 O6 C17 H28   300.0
C15 O6 C17 H29   60.0
H26 C15 O6 H27   119.9
C17 O6 C15 H26   59.9
C17 O6 C15 H27   300.0
O6 C17 C18 N1   65.0
C18 C17 O6 H28   240.0
C18 C17 O6 H29   120.0
O6 C17 C18 H30   185.0
O6 C17 C18 H31   305.0
H28 C17 O6 H29   240.0
O6 C17 C18 H28   120.0
O6 C17 C18 H29   240.0
N1 C18 C17 H30   240.0
N1 C18 C17 H31   119.9
C17 C18 N1 H32   56.1
C17 C18 N1 H33   180.0
H28 C17 C18 H29   120.0
H30 C18 C17 H31   239.9
N1 C18 C17 H28   305.0
N1 C18 C17 H29   185.0
C17 C18 N1 H30   120.0
C17 C18 N1 H31   240.1
H30 C18 N1 H31   120.1
H32 N1 C18 H33   236.1
O2 C5 H12 C6   240.0
O2 C5 H12 H13   120.0
H12 C5 C6 O3   305.0
C6 C5 H12 H13   240.0
H12 C5 C6 H14   64.9
H12 C5 C6 H15   185.0
O2 C5 H13 C6   119.9
O2 C5 H13 H12   239.9
H13 C5 C6 O3   185.0
C6 C5 H13 H12   120.0
H13 C5 C6 H14   304.9
H13 C5 C6 H15   65.0
C5 C6 H14 O3   240.1
H14 C6 C5 H12   64.9
H14 C6 C5 H13   304.9
C5 C6 H14 H15   120.0
H14 C6 O3 C8   60.1
O3 C6 H14 H15   240.0
C5 C6 H15 O3   120.0
H15 C6 C5 H12   185.0
H15 C6 C5 H13   65.0
C5 C6 H15 H14   240.0
H15 C6 O3 C8   300.0
O3 C6 H15 H14   120.0
O3 C8 H16 C9   240.0
O3 C8 H16 H17   120.0
H16 C8 C9 O4   305.0
C9 C8 H16 H17   240.0
H16 C8 C9 H18   65.0
H16 C8 C9 H19   185.0
O3 C8 H17 C9   120.1
O3 C8 H17 H16   240.0
H17 C8 C9 O4   185.0
C9 C8 H17 H16   120.0
H17 C8 C9 H18   305.0
H17 C8 C9 H19   65.0
C8 C9 H18 O4   240.0
H18 C9 C8 H16   65.0
H18 C9 C8 H17   305.0
C8 C9 H18 H19   120.0
H18 C9 O4 C11   60.0
O4 C9 H18 H19   240.0
C8 C9 H19 O4   120.0
H19 C9 C8 H16   185.0
H19 C9 C8 H17   65.0
C8 C9 H19 H18   240.0
H19 C9 O4 C11   300.0
O4 C9 H19 H18   120.0
O4 C11 H20 C12   240.0
O4 C11 H20 H21   120.0
H20 C11 C12 O5   305.0
C12 C11 H20 H21   240.1
H20 C11 C12 H22   65.0
H20 C11 C12 H23   185.0
O4 C11 H21 C12   120.0
O4 C11 H21 H20   240.0
H21 C11 C12 O5   185.0
C12 C11 H21 H20   120.0
H21 C11 C12 H22   305.0
H21 C11 C12 H23   65.0
C11 C12 H22 O5   240.0
H22 C12 C11 H20   65.0
H22 C12 C11 H21   305.0
C11 C12 H22 H23   120.0
H22 C12 O5 C14   60.0
O5 C12 H22 H23   240.0
C11 C12 H23 O5   120.0
H23 C12 C11 H20   185.0
H23 C12 C11 H21   65.0
C11 C12 H23 H22   240.0
H23 C12 O5 C14   300.0
O5 C12 H23 H22   120.0
O5 C14 H24 C15   240.0
O5 C14 H24 H25   119.9
H24 C14 C15 O6   305.0
C15 C14 H24 H25   240.0
H24 C14 C15 H26   65.0
H24 C14 C15 H27   185.0
O5 C14 H25 C15   120.0
O5 C14 H25 H24   240.1
H25 C14 C15 O6   185.0
C15 C14 H25 H24   120.1
H25 C14 C15 H26   305.0
H25 C14 C15 H27   65.0
C14 C15 H26 O6   240.0
H26 C15 C14 H24   65.0
H26 C15 C14 H25   305.0
C14 C15 H26 H27   120.0
H26 C15 O6 C17   59.9
O6 C15 H26 H27   240.1
C14 C15 H27 O6   120.0
H27 C15 C14 H24   185.0
H27 C15 C14 H25   65.0
C14 C15 H27 H26   240.0
H27 C15 O6 C17   300.0
O6 C15 H27 H26   120.0
O6 C17 H28 C18   240.0
O6 C17 H28 H29   120.0
H28 C17 C18 N1   305.0
C18 C17 H28 H29   240.0
H28 C17 C18 H30   65.0
H28 C17 C18 H31   185.0
O6 C17 H29 C18   120.0
O6 C17 H29 H28   240.0
H29 C17 C18 N1   185.0
C18 C17 H29 H28   120.0
H29 C17 C18 H30   305.0
H29 C17 C18 H31   65.0
C17 C18 H30 N1   240.0
H30 C18 C17 H28   65.0
H30 C18 C17 H29   305.0
C17 C18 H30 H31   120.0
N1 C18 H30 H31   240.0
H30 C18 N1 H32   296.1
H30 C18 N1 H33   60.0
C17 C18 H31 N1   119.9
H31 C18 C17 H28   185.0
H31 C18 C17 H29   65.0
C17 C18 H31 H30   240.0
N1 C18 H31 H30   120.0
H31 C18 N1 H32   176.0
H31 C18 N1 H33   299.9
H32 N1 C18 H30   296.1
H32 N1 C18 H31   176.0
C18 N1 H32 H33   123.9
H33 N1 C18 H30   60.0
H33 N1 C18 H31   299.9
C18 N1 H33 H32   236.1