PDB Chemical Component QI9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for QI9
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C16 |
N1 |
1.472 |
1.469 |
C16 |
C17 |
1.544 |
1.531 |
N1 |
C15 |
1.471 |
1.469 |
N1 |
C11 |
1.478 |
1.470 |
C15 |
C14 |
1.528 |
1.531 |
C17 |
C18 |
1.499 |
1.507 |
C17 |
C13 |
1.536 |
1.535 |
O |
C |
1.421 |
1.429 |
O |
C1 |
1.371 |
1.359 |
C19 |
C18 |
1.316 |
1.310 |
C14 |
C13 |
1.525 |
1.534 |
C11 |
C10 |
1.543 |
1.530 |
C11 |
C12 |
1.533 |
1.531 |
C13 |
C12 |
1.532 |
1.534 |
C1 |
C2 |
1.369 |
1.365 |
C1 |
C9 |
1.392 |
1.398 |
C2 |
C3 |
1.417 |
1.404 |
C10 |
O1 |
1.423 |
1.430 |
C10 |
C4 |
1.521 |
1.507 |
C9 |
C8 |
1.365 |
1.359 |
C3 |
C4 |
1.431 |
1.408 |
C3 |
C7 |
1.417 |
1.417 |
C4 |
C5 |
1.372 |
1.366 |
C8 |
C7 |
1.418 |
1.406 |
C7 |
N |
1.373 |
1.337 |
C5 |
C6 |
1.386 |
1.393 |
N |
C6 |
1.323 |
1.311 |
O1 |
H1 |
0.950 |
0.967 |
C10 |
H2 |
1.100 |
1.089 |
C11 |
H3 |
1.100 |
1.091 |
C15 |
H5 |
1.100 |
1.090 |
C15 |
H6 |
1.100 |
1.089 |
C14 |
H7 |
1.101 |
1.090 |
C14 |
H8 |
1.100 |
1.090 |
C16 |
H9 |
1.100 |
1.090 |
C16 |
H10 |
1.100 |
1.090 |
C17 |
H11 |
1.100 |
1.090 |
C18 |
H12 |
1.080 |
1.080 |
C19 |
H13 |
1.080 |
1.080 |
C19 |
H14 |
1.080 |
1.080 |
C13 |
H15 |
1.100 |
1.089 |
C12 |
H16 |
1.100 |
1.090 |
C12 |
H17 |
1.101 |
1.091 |
C5 |
H18 |
1.080 |
1.080 |
C6 |
H19 |
1.080 |
1.080 |
C2 |
H20 |
1.080 |
1.080 |
C8 |
H21 |
1.080 |
1.080 |
C9 |
H22 |
1.080 |
1.080 |
C |
H23 |
1.100 |
1.090 |
C |
H24 |
1.100 |
1.091 |
C |
H25 |
1.100 |
1.090 |
Bond Angles for QI9
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C16 |
C17 |
C18 |
112.4 |
109.6 |
C16 |
C17 |
C13 |
106.3 |
108.9 |
C17 |
C16 |
H9 |
108.8 |
109.5 |
C17 |
C16 |
H10 |
108.8 |
109.5 |
C16 |
C17 |
H11 |
108.0 |
109.6 |
N1 |
C15 |
C14 |
111.2 |
109.3 |
N1 |
C15 |
H5 |
109.0 |
109.5 |
N1 |
C15 |
H6 |
109.0 |
109.6 |
N1 |
C11 |
C12 |
110.5 |
109.4 |
N1 |
C11 |
H3 |
106.3 |
109.5 |
C15 |
C14 |
C13 |
108.1 |
108.9 |
C14 |
C15 |
H5 |
109.0 |
109.5 |
C14 |
C15 |
H6 |
109.0 |
109.5 |
C15 |
C14 |
H7 |
109.8 |
109.6 |
C15 |
C14 |
H8 |
109.8 |
109.6 |
C18 |
C17 |
C13 |
113.3 |
109.5 |
C18 |
C17 |
H11 |
108.6 |
109.6 |
C17 |
C18 |
H12 |
116.5 |
120.0 |
C14 |
C13 |
C17 |
107.8 |
108.6 |
C17 |
C13 |
C12 |
109.7 |
108.6 |
C13 |
C17 |
H11 |
108.1 |
109.7 |
C17 |
C13 |
H15 |
110.2 |
110.1 |
O |
C |
H23 |
109.5 |
109.5 |
O |
C |
H24 |
109.5 |
109.4 |
O |
C |
H25 |
109.5 |
109.5 |
C19 |
C18 |
H12 |
116.6 |
120.0 |
C14 |
C13 |
C12 |
108.4 |
108.6 |
C13 |
C14 |
H7 |
109.8 |
109.6 |
C13 |
C14 |
H8 |
109.8 |
109.5 |
C14 |
C13 |
H15 |
110.3 |
110.1 |
C11 |
C10 |
C4 |
109.9 |
109.4 |
C11 |
C10 |
H2 |
107.9 |
109.5 |
C11 |
C12 |
C13 |
107.8 |
108.9 |
C12 |
C11 |
H3 |
105.7 |
109.5 |
C11 |
C12 |
H16 |
109.9 |
109.6 |
C11 |
C12 |
H17 |
109.9 |
109.6 |
C12 |
C13 |
H15 |
110.3 |
110.8 |
C13 |
C12 |
H16 |
109.9 |
109.6 |
C13 |
C12 |
H17 |
109.9 |
109.6 |
C1 |
C2 |
H20 |
119.7 |
120.3 |
C1 |
C9 |
H22 |
119.8 |
119.5 |
C10 |
O1 |
H1 |
109.5 |
114.0 |
C10 |
C4 |
C5 |
120.3 |
121.0 |
C4 |
C10 |
H2 |
108.1 |
109.5 |
C9 |
C8 |
H21 |
119.6 |
120.1 |
C4 |
C5 |
C6 |
119.9 |
120.0 |
C4 |
C5 |
H18 |
120.1 |
120.0 |
C6 |
C5 |
H18 |
120.1 |
120.0 |
C5 |
C6 |
H19 |
117.6 |
119.1 |
N |
C6 |
H19 |
117.6 |
119.2 |
H5 |
C15 |
H6 |
109.5 |
109.5 |
H7 |
C14 |
H8 |
109.5 |
109.7 |
H9 |
C16 |
H10 |
109.5 |
109.5 |
H13 |
C19 |
H14 |
120.0 |
120.0 |
H16 |
C12 |
H17 |
109.5 |
109.6 |
H23 |
C |
H24 |
109.5 |
109.4 |
H23 |
C |
H25 |
109.5 |
109.5 |
H24 |
C |
H25 |
109.4 |
109.5 |
Torsion Angles for QI9
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C16 |
N1 |
C15 |
H5 |
69.6 |
57.9 |
C16 |
N1 |
C15 |
H6 |
189.1 |
178.0 |
C16 |
N1 |
C11 |
C12 |
70.4 |
62.0 |
C16 |
N1 |
C11 |
H3 |
316.3 |
302.0 |
C18 |
C17 |
C16 |
C13 |
124.5 |
119.8 |
C18 |
C17 |
C16 |
H11 |
240.3 |
239.7 |
C16 |
C17 |
C18 |
H12 |
174.3 |
300.0 |
C14 |
C13 |
C17 |
C16 |
308.0 |
301.1 |
C16 |
C17 |
C13 |
C12 |
65.9 |
58.9 |
C13 |
C17 |
C16 |
H11 |
115.8 |
120.0 |
C16 |
C17 |
C13 |
H15 |
187.5 |
180.5 |
H9 |
C16 |
C17 |
H10 |
119.2 |
120.1 |
C15 |
N1 |
C11 |
C12 |
312.9 |
298.0 |
C15 |
N1 |
C11 |
H3 |
198.7 |
178.0 |
N1 |
C15 |
C14 |
C13 |
345.6 |
0.0 |
C14 |
C15 |
N1 |
H5 |
239.7 |
240.1 |
C14 |
C15 |
N1 |
H6 |
120.2 |
120.0 |
N1 |
C15 |
C14 |
H7 |
105.3 |
119.8 |
N1 |
C15 |
C14 |
H8 |
225.8 |
240.2 |
H5 |
C15 |
N1 |
H6 |
240.5 |
239.9 |
N1 |
C11 |
C10 |
C4 |
165.4 |
171.9 |
N1 |
C11 |
C10 |
H2 |
47.7 |
51.9 |
N1 |
C11 |
C12 |
C13 |
342.0 |
0.0 |
C12 |
C11 |
N1 |
H3 |
114.2 |
120.0 |
N1 |
C11 |
C12 |
H16 |
101.7 |
119.8 |
N1 |
C11 |
C12 |
H17 |
222.3 |
240.2 |
N1 |
C15 |
C14 |
H5 |
120.3 |
119.9 |
N1 |
C15 |
C14 |
H6 |
239.8 |
240.0 |
C15 |
C14 |
C13 |
C17 |
68.4 |
58.9 |
C15 |
C14 |
C13 |
C12 |
309.7 |
301.0 |
C13 |
C14 |
C15 |
H7 |
240.2 |
240.2 |
C13 |
C14 |
C15 |
H8 |
119.8 |
119.8 |
C15 |
C14 |
C13 |
H15 |
188.9 |
179.5 |
H5 |
C15 |
C14 |
H6 |
119.5 |
120.1 |
H7 |
C14 |
C15 |
H8 |
239.6 |
239.6 |
C16 |
C17 |
C18 |
C13 |
239.5 |
240.6 |
C18 |
C17 |
C16 |
H9 |
350.5 |
359.8 |
C18 |
C17 |
C16 |
H10 |
231.3 |
239.7 |
C16 |
C17 |
C18 |
H11 |
119.4 |
120.3 |
C14 |
C13 |
C17 |
C18 |
184.1 |
181.3 |
C18 |
C17 |
C13 |
C12 |
302.0 |
299.2 |
C13 |
C17 |
C18 |
H11 |
239.9 |
239.7 |
C18 |
C17 |
C13 |
H15 |
63.6 |
60.7 |
C19 |
C18 |
C17 |
H12 |
180.0 |
180.1 |
C16 |
C17 |
C13 |
C18 |
123.9 |
119.8 |
C13 |
C17 |
C16 |
H9 |
226.0 |
240.0 |
C13 |
C17 |
C16 |
H10 |
106.9 |
119.9 |
C16 |
C17 |
C13 |
H11 |
244.3 |
240.1 |
C18 |
C17 |
C13 |
H11 |
120.3 |
120.3 |
C13 |
C17 |
C18 |
H12 |
294.8 |
59.3 |
C14 |
C13 |
C17 |
C12 |
242.1 |
242.2 |
C17 |
C13 |
C14 |
H7 |
308.7 |
299.1 |
C17 |
C13 |
C14 |
H8 |
188.2 |
178.7 |
C14 |
C13 |
C17 |
H15 |
120.5 |
120.6 |
C11 |
C12 |
C13 |
C17 |
311.3 |
301.1 |
C12 |
C13 |
C17 |
H15 |
238.4 |
238.5 |
C17 |
C13 |
C12 |
H16 |
191.6 |
181.2 |
C17 |
C13 |
C12 |
H17 |
71.1 |
60.9 |
H23 |
C |
O |
H24 |
240.0 |
240.1 |
H23 |
C |
O |
H25 |
120.0 |
120.1 |
H24 |
C |
O |
H25 |
240.0 |
240.0 |
O |
C1 |
C2 |
H20 |
358.4 |
360.0 |
O |
C1 |
C9 |
H22 |
1.8 |
359.5 |
C19 |
C18 |
C17 |
C13 |
114.8 |
239.4 |
C19 |
C18 |
C17 |
H11 |
234.9 |
359.8 |
C17 |
C18 |
C19 |
H12 |
180.0 |
179.9 |
C16 |
C17 |
C13 |
C14 |
308.0 |
301.1 |
C13 |
C14 |
C15 |
H5 |
225.3 |
240.1 |
C13 |
C14 |
C15 |
H6 |
105.8 |
120.1 |
C15 |
C14 |
C13 |
H7 |
119.8 |
119.8 |
C15 |
C14 |
C13 |
H8 |
240.2 |
240.2 |
C18 |
C17 |
C13 |
C14 |
184.1 |
181.3 |
C17 |
C13 |
C14 |
C12 |
118.7 |
117.8 |
C14 |
C13 |
C17 |
H11 |
63.8 |
61.0 |
C17 |
C13 |
C14 |
H15 |
239.6 |
239.3 |
C11 |
C12 |
C13 |
C14 |
68.8 |
58.9 |
C12 |
C13 |
C14 |
H15 |
120.8 |
121.5 |
C14 |
C13 |
C12 |
H16 |
309.1 |
299.1 |
C14 |
C13 |
C12 |
H17 |
188.6 |
178.8 |
H7 |
C14 |
C13 |
H8 |
120.4 |
120.3 |
C11 |
C10 |
O1 |
H1 |
180.0 |
300.0 |
C11 |
C10 |
C4 |
C5 |
109.2 |
94.9 |
C4 |
C10 |
C11 |
H2 |
117.7 |
120.0 |
N1 |
C11 |
C12 |
H3 |
245.4 |
240.0 |
C17 |
C13 |
C12 |
C11 |
311.3 |
301.1 |
C14 |
C13 |
C12 |
C11 |
68.8 |
58.9 |
C12 |
C11 |
C10 |
C4 |
293.6 |
291.8 |
C12 |
C11 |
C10 |
H2 |
175.9 |
171.8 |
C11 |
C12 |
C13 |
H15 |
189.7 |
180.0 |
C13 |
C12 |
C11 |
H16 |
240.3 |
240.2 |
C13 |
C12 |
C11 |
H17 |
119.7 |
119.8 |
H16 |
C12 |
C11 |
H17 |
239.5 |
239.7 |
C14 |
C13 |
C12 |
C17 |
117.5 |
117.8 |
C12 |
C13 |
C17 |
H11 |
181.6 |
178.9 |
C17 |
C13 |
C12 |
H15 |
121.6 |
121.1 |
C12 |
C13 |
C14 |
H7 |
189.9 |
181.2 |
C12 |
C13 |
C14 |
H8 |
69.5 |
60.9 |
C14 |
C13 |
C12 |
H15 |
239.1 |
238.9 |
C13 |
C12 |
C11 |
H3 |
96.6 |
120.0 |
C11 |
C12 |
C13 |
H16 |
119.7 |
119.9 |
C11 |
C12 |
C13 |
H17 |
240.3 |
240.2 |
H16 |
C12 |
C13 |
H17 |
120.5 |
120.3 |
C9 |
C1 |
C2 |
H20 |
179.5 |
179.3 |
C1 |
C9 |
C8 |
H21 |
180.0 |
179.2 |
C11 |
C10 |
C4 |
H2 |
242.5 |
240.0 |
C4 |
C10 |
O1 |
H1 |
302.2 |
60.0 |
C10 |
C4 |
C5 |
C6 |
182.7 |
180.0 |
C10 |
C4 |
C5 |
H18 |
2.7 |
359.9 |
C3 |
C4 |
C10 |
H2 |
48.9 |
34.5 |
C3 |
C4 |
C5 |
H18 |
180.7 |
180.2 |
C5 |
C4 |
C10 |
H2 |
226.8 |
214.9 |
C6 |
C5 |
C4 |
H18 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
H19 |
180.5 |
180.0 |
C7 |
N |
C6 |
H19 |
179.3 |
180.0 |
C4 |
C5 |
C6 |
H18 |
180.0 |
179.9 |
N |
C6 |
C5 |
H19 |
180.0 |
180.0 |
N |
C6 |
C5 |
H18 |
180.5 |
180.0 |
C5 |
C6 |
N |
H19 |
180.0 |
180.0 |
C11 |
C10 |
H2 |
C4 |
118.8 |
120.0 |
H2 |
C10 |
O1 |
H1 |
61.7 |
180.0 |
H2 |
C10 |
C4 |
C5 |
226.8 |
214.9 |
N1 |
C11 |
H3 |
C12 |
117.5 |
119.9 |
H3 |
C11 |
C10 |
C4 |
49.6 |
51.8 |
H3 |
C11 |
C10 |
H2 |
291.9 |
291.8 |
H3 |
C11 |
C12 |
C13 |
96.6 |
120.0 |
H3 |
C11 |
C12 |
H16 |
216.3 |
239.8 |
H3 |
C11 |
C12 |
H17 |
336.8 |
0.2 |
N1 |
C15 |
H5 |
C14 |
238.4 |
240.2 |
N1 |
C15 |
H5 |
H6 |
119.2 |
120.1 |
H5 |
C15 |
C14 |
C13 |
225.3 |
240.1 |
C14 |
C15 |
H5 |
H6 |
240.8 |
240.0 |
H5 |
C15 |
C14 |
H7 |
345.1 |
359.9 |
H5 |
C15 |
C14 |
H8 |
105.5 |
120.3 |
N1 |
C15 |
H6 |
C14 |
121.5 |
119.9 |
N1 |
C15 |
H6 |
H5 |
240.8 |
239.9 |
H6 |
C15 |
C14 |
C13 |
105.8 |
120.1 |
C14 |
C15 |
H6 |
H5 |
119.2 |
120.0 |
H6 |
C15 |
C14 |
H7 |
225.6 |
239.9 |
H6 |
C15 |
C14 |
H8 |
346.0 |
0.3 |
C15 |
C14 |
H7 |
C13 |
241.3 |
240.6 |
H7 |
C14 |
C15 |
H5 |
345.1 |
359.9 |
H7 |
C14 |
C15 |
H6 |
225.6 |
239.9 |
C15 |
C14 |
H7 |
H8 |
120.7 |
120.3 |
H7 |
C14 |
C13 |
C17 |
308.7 |
299.1 |
H7 |
C14 |
C13 |
C12 |
189.9 |
181.2 |
C13 |
C14 |
H7 |
H8 |
239.3 |
239.7 |
H7 |
C14 |
C13 |
H15 |
69.1 |
59.7 |
C15 |
C14 |
H8 |
C13 |
118.7 |
119.4 |
H8 |
C14 |
C15 |
H5 |
105.5 |
120.3 |
H8 |
C14 |
C15 |
H6 |
346.0 |
0.3 |
C15 |
C14 |
H8 |
H7 |
239.3 |
239.7 |
H8 |
C14 |
C13 |
C17 |
188.2 |
178.7 |
H8 |
C14 |
C13 |
C12 |
69.5 |
60.9 |
C13 |
C14 |
H8 |
H7 |
120.6 |
120.3 |
H8 |
C14 |
C13 |
H15 |
308.7 |
299.4 |
H9 |
C16 |
C17 |
C18 |
350.5 |
359.8 |
H9 |
C16 |
C17 |
C13 |
226.0 |
240.0 |
C17 |
C16 |
H9 |
H10 |
241.3 |
239.9 |
H9 |
C16 |
C17 |
H11 |
110.2 |
120.0 |
H10 |
C16 |
C17 |
C18 |
231.3 |
239.7 |
H10 |
C16 |
C17 |
C13 |
106.9 |
119.9 |
C17 |
C16 |
H10 |
H9 |
118.7 |
120.1 |
H10 |
C16 |
C17 |
H11 |
351.1 |
359.9 |
C16 |
C17 |
H11 |
C18 |
237.9 |
239.7 |
C16 |
C17 |
H11 |
C13 |
114.6 |
119.5 |
H11 |
C17 |
C16 |
H9 |
110.2 |
120.0 |
H11 |
C17 |
C16 |
H10 |
351.1 |
359.9 |
C18 |
C17 |
H11 |
C13 |
236.8 |
239.7 |
H11 |
C17 |
C18 |
H12 |
54.9 |
179.7 |
H11 |
C17 |
C13 |
C12 |
181.6 |
178.9 |
H11 |
C17 |
C13 |
H15 |
303.3 |
300.4 |
H12 |
C18 |
C17 |
C13 |
294.8 |
59.3 |
H12 |
C18 |
C17 |
H11 |
54.9 |
179.7 |
H13 |
C19 |
C18 |
H12 |
360.0 |
180.0 |
H14 |
C19 |
C18 |
H12 |
180.0 |
0.1 |
C14 |
C13 |
H15 |
C17 |
241.0 |
240.3 |
C17 |
C13 |
H15 |
C12 |
238.7 |
239.8 |
H15 |
C13 |
C17 |
H11 |
303.3 |
300.4 |
C14 |
C13 |
H15 |
C12 |
119.7 |
120.1 |
H15 |
C13 |
C14 |
H7 |
69.1 |
59.7 |
H15 |
C13 |
C14 |
H8 |
308.7 |
299.4 |
H15 |
C13 |
C12 |
H16 |
70.0 |
60.1 |
H15 |
C13 |
C12 |
H17 |
309.5 |
299.8 |
C11 |
C12 |
H16 |
C13 |
241.6 |
240.6 |
H16 |
C12 |
C11 |
H3 |
216.3 |
239.8 |
C11 |
C12 |
H16 |
H17 |
120.8 |
120.3 |
H16 |
C12 |
C13 |
H15 |
70.0 |
60.1 |
C13 |
C12 |
H16 |
H17 |
239.2 |
239.7 |
C11 |
C12 |
H17 |
C13 |
118.4 |
119.4 |
H17 |
C12 |
C11 |
H3 |
336.8 |
0.2 |
C11 |
C12 |
H17 |
H16 |
239.2 |
239.7 |
H17 |
C12 |
C13 |
H15 |
309.5 |
299.8 |
C13 |
C12 |
H17 |
H16 |
120.8 |
120.3 |
C4 |
C5 |
H18 |
C6 |
180.0 |
180.1 |
H18 |
C5 |
C6 |
H19 |
0.5 |
0.0 |
H19 |
C6 |
C5 |
H18 |
0.5 |
0.0 |
H22 |
C9 |
C8 |
H21 |
360.0 |
0.0 |
O |
C |
H23 |
H24 |
120.0 |
119.9 |
O |
C |
H23 |
H25 |
240.0 |
239.9 |
H24 |
C |
H23 |
H25 |
120.0 |
120.0 |
O |
C |
H24 |
H23 |
240.0 |
240.0 |
O |
C |
H24 |
H25 |
120.0 |
120.0 |
H23 |
C |
H24 |
H25 |
240.0 |
240.0 |
O |
C |
H25 |
H23 |
120.1 |
120.0 |
O |
C |
H25 |
H24 |
240.0 |
240.0 |
H23 |
C |
H25 |
H24 |
120.0 |
120.0 |