PDB Chemical Component QCT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for QCT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O9 |
C22 |
1.432 |
1.429 |
O10 |
C23 |
1.439 |
1.429 |
C22 |
C23 |
1.539 |
1.532 |
C22 |
C21 |
1.550 |
1.531 |
C23 |
C24 |
1.543 |
1.532 |
C24 |
O11 |
1.424 |
1.429 |
C24 |
C25 |
1.537 |
1.531 |
C21 |
O8 |
1.426 |
1.429 |
C21 |
O7 |
1.424 |
1.429 |
O8 |
C25 |
1.414 |
1.429 |
O7 |
C3 |
1.430 |
1.360 |
C25 |
C26 |
1.538 |
1.531 |
O2 |
C4 |
1.255 |
1.221 |
O5 |
C13 |
1.424 |
1.359 |
C4 |
C3 |
1.394 |
1.419 |
C4 |
C10 |
1.403 |
1.472 |
C3 |
C2 |
1.402 |
1.363 |
O3 |
C5 |
1.418 |
1.358 |
C12 |
C13 |
1.397 |
1.382 |
C12 |
C11 |
1.403 |
1.398 |
C13 |
C14 |
1.391 |
1.394 |
C2 |
C11 |
1.527 |
1.475 |
C2 |
O1 |
1.252 |
1.344 |
C10 |
C5 |
1.389 |
1.400 |
C10 |
C9 |
1.400 |
1.407 |
C11 |
C16 |
1.406 |
1.397 |
C5 |
C6 |
1.400 |
1.382 |
C14 |
O6 |
1.395 |
1.359 |
C14 |
C15 |
1.402 |
1.388 |
O1 |
C9 |
1.237 |
1.350 |
C9 |
C8 |
1.398 |
1.386 |
C16 |
C15 |
1.399 |
1.378 |
C6 |
C7 |
1.401 |
1.391 |
C8 |
C7 |
1.387 |
1.387 |
C7 |
O4 |
1.416 |
1.358 |
O10 |
H101 |
0.951 |
0.967 |
C23 |
H23 |
1.100 |
1.091 |
C22 |
H22 |
1.100 |
1.090 |
O9 |
HO91 |
0.950 |
0.967 |
C24 |
H24 |
1.100 |
1.090 |
O11 |
HO11 |
0.950 |
0.967 |
C25 |
H25 |
1.101 |
1.090 |
C26 |
H262 |
1.100 |
1.090 |
C26 |
H263 |
1.100 |
1.090 |
C26 |
H261 |
1.100 |
1.089 |
C21 |
H21 |
1.100 |
1.090 |
C12 |
H12 |
1.080 |
1.080 |
O5 |
HO51 |
0.950 |
0.967 |
O6 |
HO61 |
0.950 |
0.967 |
C15 |
H15 |
1.080 |
1.080 |
C16 |
H16 |
1.080 |
1.080 |
C8 |
H8 |
1.080 |
1.080 |
O4 |
HO4 |
0.949 |
0.966 |
C6 |
H6 |
1.080 |
1.081 |
O3 |
HO3 |
0.950 |
0.967 |
Bond Angles for QCT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O9 |
C22 |
C21 |
109.4 |
109.5 |
O9 |
C22 |
H22 |
109.6 |
109.5 |
O10 |
C23 |
C24 |
108.6 |
109.5 |
C23 |
O10 |
H101 |
109.5 |
114.0 |
O10 |
C23 |
H23 |
110.5 |
109.6 |
C22 |
C23 |
C24 |
112.6 |
109.0 |
C22 |
C23 |
H23 |
109.1 |
109.6 |
C22 |
C21 |
O8 |
111.5 |
109.4 |
C22 |
C21 |
O7 |
103.3 |
109.4 |
C21 |
C22 |
H22 |
108.0 |
109.5 |
C22 |
C21 |
H21 |
108.7 |
109.5 |
C23 |
C24 |
O11 |
110.8 |
109.5 |
C23 |
C24 |
C25 |
108.8 |
109.1 |
C24 |
C23 |
H23 |
109.0 |
109.5 |
C23 |
C24 |
H24 |
109.0 |
109.5 |
O11 |
C24 |
C25 |
108.5 |
109.5 |
O11 |
C24 |
H24 |
110.7 |
109.5 |
C24 |
O11 |
HO11 |
109.5 |
114.0 |
C24 |
C25 |
C26 |
111.7 |
109.5 |
C25 |
C24 |
H24 |
109.1 |
109.5 |
C24 |
C25 |
H25 |
108.9 |
109.5 |
C21 |
O7 |
C3 |
116.0 |
117.0 |
O7 |
C21 |
H21 |
110.4 |
109.5 |
O8 |
C25 |
H25 |
110.6 |
109.5 |
O7 |
C3 |
C2 |
119.6 |
120.3 |
C26 |
C25 |
H25 |
108.8 |
109.5 |
C25 |
C26 |
H262 |
109.5 |
109.5 |
C25 |
C26 |
H263 |
109.5 |
109.4 |
C25 |
C26 |
H261 |
109.5 |
109.5 |
O2 |
C4 |
C10 |
122.6 |
121.3 |
O5 |
C13 |
C14 |
118.1 |
120.0 |
C4 |
C3 |
C2 |
119.4 |
119.4 |
C4 |
C10 |
C5 |
121.7 |
121.3 |
C4 |
C10 |
C9 |
118.4 |
118.5 |
C3 |
C2 |
C11 |
123.5 |
118.7 |
C3 |
C2 |
O1 |
120.9 |
122.4 |
C12 |
C13 |
C14 |
121.4 |
120.0 |
C13 |
C12 |
H12 |
120.4 |
120.1 |
C12 |
C11 |
C16 |
119.5 |
119.9 |
C13 |
C14 |
O6 |
119.0 |
120.0 |
C13 |
C14 |
C15 |
119.6 |
120.2 |
C11 |
C2 |
O1 |
115.6 |
118.8 |
C2 |
C11 |
C16 |
118.3 |
120.1 |
C2 |
O1 |
C9 |
123.7 |
122.4 |
C11 |
C16 |
C15 |
120.6 |
120.0 |
C11 |
C16 |
H16 |
119.7 |
120.0 |
C5 |
C6 |
H6 |
120.4 |
119.9 |
O6 |
C14 |
C15 |
121.4 |
119.9 |
C14 |
O6 |
HO61 |
109.5 |
114.0 |
C14 |
C15 |
H15 |
120.2 |
119.9 |
O1 |
C9 |
C8 |
117.6 |
120.8 |
C9 |
C8 |
C7 |
119.6 |
120.1 |
C9 |
C8 |
H8 |
120.2 |
120.0 |
C16 |
C15 |
H15 |
120.2 |
119.9 |
C8 |
C7 |
O4 |
119.3 |
119.7 |
C7 |
C8 |
H8 |
120.2 |
119.9 |
C7 |
O4 |
HO4 |
109.5 |
114.0 |
H262 |
C26 |
H263 |
109.5 |
109.5 |
H262 |
C26 |
H261 |
109.5 |
109.5 |
H263 |
C26 |
H261 |
109.5 |
109.5 |
Torsion Angles for QCT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O9 |
C22 |
C23 |
C24 |
281.2 |
297.1 |
O9 |
C22 |
C23 |
H23 |
160.0 |
177.2 |
O9 |
C22 |
C21 |
O8 |
83.3 |
62.3 |
O9 |
C22 |
C21 |
O7 |
204.1 |
182.3 |
C21 |
C22 |
O9 |
H22 |
118.3 |
120.1 |
O9 |
C22 |
C21 |
H21 |
321.4 |
302.3 |
C22 |
C23 |
O10 |
C24 |
238.2 |
240.4 |
C22 |
C23 |
O10 |
H23 |
118.7 |
120.2 |
O10 |
C23 |
C24 |
O11 |
66.9 |
63.2 |
O10 |
C23 |
C24 |
C25 |
186.0 |
183.2 |
C24 |
C23 |
O10 |
H23 |
240.5 |
239.8 |
O10 |
C23 |
C24 |
H24 |
304.9 |
303.1 |
O10 |
C23 |
C22 |
C24 |
119.3 |
119.9 |
C22 |
C23 |
O10 |
H101 |
180.0 |
60.4 |
O10 |
C23 |
C22 |
H23 |
240.4 |
239.8 |
C22 |
C23 |
C24 |
O11 |
185.3 |
183.1 |
C22 |
C23 |
C24 |
C25 |
304.4 |
303.1 |
C24 |
C23 |
C22 |
H23 |
121.2 |
119.9 |
C22 |
C23 |
C24 |
H24 |
63.3 |
63.0 |
O9 |
C22 |
C21 |
H22 |
240.7 |
239.9 |
C21 |
C22 |
C23 |
C24 |
42.8 |
57.0 |
C21 |
C22 |
C23 |
H23 |
281.6 |
297.1 |
C22 |
C21 |
O7 |
C3 |
182.6 |
166.0 |
O7 |
C21 |
C22 |
H21 |
242.7 |
240.0 |
C24 |
C23 |
O10 |
H101 |
301.8 |
179.9 |
O10 |
C23 |
C24 |
H23 |
120.4 |
120.2 |
C22 |
C23 |
C24 |
H23 |
238.8 |
240.1 |
O11 |
C24 |
C23 |
C25 |
240.8 |
240.1 |
O11 |
C24 |
C23 |
H24 |
122.0 |
120.1 |
C23 |
C24 |
O11 |
HO11 |
180.0 |
180.0 |
C23 |
C24 |
C25 |
C26 |
183.6 |
177.6 |
C25 |
C24 |
C23 |
H24 |
241.2 |
240.1 |
C23 |
C24 |
C25 |
H25 |
303.8 |
297.6 |
C23 |
C24 |
O11 |
C25 |
119.3 |
119.7 |
O11 |
C24 |
C23 |
H23 |
306.4 |
303.0 |
C23 |
C24 |
O11 |
H24 |
239.0 |
239.9 |
O11 |
C24 |
C25 |
C26 |
304.2 |
297.5 |
C25 |
C24 |
O11 |
H24 |
119.7 |
120.2 |
O11 |
C24 |
C25 |
H25 |
64.4 |
57.5 |
C23 |
C24 |
C25 |
O11 |
239.4 |
240.1 |
C25 |
C24 |
C23 |
H23 |
65.6 |
63.0 |
C23 |
C24 |
C25 |
H24 |
118.8 |
119.9 |
O11 |
C24 |
C25 |
H24 |
239.4 |
239.9 |
C25 |
C24 |
O11 |
HO11 |
60.7 |
60.3 |
O8 |
C25 |
C24 |
H25 |
118.5 |
120.1 |
C26 |
C25 |
C24 |
H25 |
239.8 |
240.0 |
C24 |
C25 |
C26 |
H262 |
180.0 |
60.0 |
C24 |
C25 |
C26 |
H263 |
300.0 |
180.0 |
C24 |
C25 |
C26 |
H261 |
60.0 |
300.0 |
C22 |
C21 |
O8 |
O7 |
115.4 |
120.0 |
O8 |
C21 |
C22 |
H22 |
202.6 |
182.4 |
C22 |
C21 |
O8 |
H21 |
239.1 |
240.0 |
C21 |
O8 |
C25 |
H25 |
52.3 |
58.8 |
C22 |
C21 |
O7 |
O8 |
239.7 |
240.1 |
O7 |
C21 |
C22 |
H22 |
323.4 |
302.4 |
C22 |
C21 |
O7 |
H21 |
116.1 |
120.0 |
C21 |
O7 |
C3 |
C2 |
130.3 |
117.6 |
C22 |
C21 |
O8 |
C25 |
53.0 |
61.2 |
O8 |
C25 |
C24 |
H24 |
303.5 |
297.7 |
C24 |
C25 |
O8 |
H25 |
242.7 |
240.0 |
C26 |
C25 |
O8 |
H25 |
121.4 |
120.0 |
O8 |
C25 |
C26 |
H262 |
297.4 |
179.9 |
O8 |
C25 |
C26 |
H263 |
57.4 |
299.9 |
O8 |
C25 |
C26 |
H261 |
177.3 |
59.9 |
C3 |
O7 |
C21 |
H21 |
66.6 |
45.9 |
C4 |
C3 |
O7 |
C2 |
178.2 |
180.3 |
O7 |
C3 |
C2 |
C11 |
0.5 |
360.0 |
O7 |
C3 |
C2 |
O1 |
179.9 |
180.0 |
C26 |
C25 |
C24 |
H24 |
64.8 |
57.7 |
C24 |
C25 |
C26 |
H25 |
120.2 |
120.0 |
O8 |
C25 |
C26 |
H25 |
237.6 |
240.0 |
H262 |
C26 |
C25 |
H263 |
240.0 |
240.0 |
H262 |
C26 |
C25 |
H261 |
120.0 |
120.0 |
H263 |
C26 |
C25 |
H261 |
240.0 |
240.0 |
O2 |
C4 |
C3 |
C2 |
180.3 |
180.3 |
O2 |
C4 |
C10 |
C5 |
359.7 |
359.5 |
O2 |
C4 |
C10 |
C9 |
179.4 |
179.9 |
C12 |
C13 |
O5 |
C14 |
178.9 |
180.0 |
O5 |
C13 |
C12 |
H12 |
358.0 |
0.0 |
O5 |
C13 |
C14 |
O6 |
359.9 |
0.0 |
O5 |
C13 |
C14 |
C15 |
179.7 |
180.0 |
O7 |
C3 |
C4 |
C2 |
181.8 |
179.7 |
C4 |
C3 |
C2 |
C11 |
182.3 |
179.7 |
C4 |
C3 |
C2 |
O1 |
1.7 |
359.8 |
C10 |
C4 |
C3 |
C2 |
359.4 |
0.2 |
C11 |
C2 |
C3 |
O1 |
180.6 |
180.0 |
C3 |
C2 |
C11 |
C16 |
194.9 |
228.0 |
C3 |
C2 |
O1 |
C9 |
357.5 |
360.0 |
O3 |
C5 |
C6 |
H6 |
359.9 |
0.0 |
O5 |
C13 |
C12 |
C14 |
181.2 |
180.0 |
C13 |
C12 |
C11 |
C16 |
4.7 |
0.3 |
C12 |
C13 |
C14 |
O6 |
181.1 |
180.0 |
C12 |
C13 |
C14 |
C15 |
0.8 |
360.0 |
C12 |
C11 |
C2 |
O1 |
201.8 |
228.3 |
C2 |
C11 |
C12 |
C16 |
173.6 |
179.7 |
C12 |
C11 |
C16 |
C15 |
356.1 |
359.5 |
C12 |
C11 |
C16 |
H16 |
176.1 |
179.7 |
C14 |
C13 |
C12 |
H12 |
176.8 |
180.0 |
O6 |
C14 |
C13 |
C15 |
180.3 |
180.1 |
C13 |
C14 |
O6 |
HO61 |
180.0 |
89.9 |
C13 |
C14 |
C15 |
H15 |
180.0 |
180.0 |
C3 |
C2 |
C11 |
O1 |
179.4 |
180.0 |
C12 |
C11 |
C2 |
C16 |
186.4 |
180.3 |
C11 |
C2 |
O1 |
C9 |
176.9 |
180.0 |
C2 |
C11 |
C16 |
C15 |
182.3 |
179.9 |
C2 |
C11 |
C16 |
H16 |
2.3 |
0.1 |
C3 |
C2 |
O1 |
C11 |
180.6 |
180.0 |
O1 |
C2 |
C11 |
C16 |
15.4 |
48.0 |
C2 |
O1 |
C9 |
C8 |
181.2 |
180.0 |
C4 |
C10 |
C5 |
C9 |
179.7 |
180.5 |
C10 |
C5 |
C6 |
H6 |
179.1 |
180.2 |
C4 |
C10 |
C9 |
C5 |
180.3 |
179.6 |
C10 |
C9 |
C8 |
H8 |
180.1 |
179.7 |
C16 |
C11 |
C2 |
O1 |
15.4 |
48.0 |
C11 |
C16 |
C15 |
H15 |
181.5 |
180.2 |
C4 |
C10 |
C5 |
C6 |
180.5 |
180.0 |
C13 |
C14 |
O6 |
C15 |
179.7 |
179.9 |
O6 |
C14 |
C15 |
H15 |
359.8 |
360.0 |
C13 |
C14 |
C15 |
O6 |
180.3 |
180.1 |
C11 |
C16 |
C15 |
C14 |
1.5 |
0.4 |
C15 |
C14 |
O6 |
HO61 |
0.3 |
270.0 |
C16 |
C15 |
C14 |
H15 |
180.0 |
179.8 |
C4 |
C10 |
C9 |
O1 |
359.0 |
359.8 |
O1 |
C9 |
C8 |
C7 |
181.0 |
180.0 |
O1 |
C9 |
C8 |
H8 |
1.0 |
360.0 |
C4 |
C10 |
C9 |
C8 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
O4 |
179.9 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
C11 |
C16 |
C15 |
H16 |
180.0 |
180.2 |
C14 |
C15 |
C16 |
H15 |
180.0 |
180.2 |
C6 |
C7 |
C8 |
H8 |
179.7 |
180.0 |
C6 |
C7 |
O4 |
HO4 |
180.0 |
270.0 |
C9 |
C8 |
C7 |
H8 |
180.0 |
179.9 |
C8 |
C7 |
O4 |
HO4 |
359.9 |
89.9 |
O4 |
C7 |
C8 |
H8 |
359.9 |
0.1 |
H101 |
O10 |
C23 |
C24 |
301.8 |
179.9 |
H101 |
O10 |
C23 |
H23 |
61.4 |
300.1 |
O10 |
C23 |
H23 |
C24 |
240.7 |
239.8 |
H23 |
C23 |
O10 |
H101 |
61.4 |
300.1 |
C22 |
C23 |
H23 |
C24 |
123.3 |
119.6 |
H23 |
C23 |
C24 |
O11 |
306.4 |
303.0 |
H23 |
C23 |
C24 |
C25 |
65.6 |
63.0 |
H23 |
C23 |
C24 |
H24 |
184.5 |
182.9 |
O9 |
C22 |
H22 |
C21 |
119.1 |
120.1 |
H22 |
C22 |
C23 |
C24 |
162.1 |
176.9 |
H22 |
C22 |
C23 |
H23 |
41.0 |
57.0 |
H22 |
C22 |
C21 |
O8 |
202.6 |
182.4 |
H22 |
C22 |
C21 |
O7 |
323.4 |
302.4 |
H22 |
C22 |
C21 |
H21 |
80.7 |
62.5 |
HO91 |
O9 |
C22 |
C21 |
56.5 |
65.6 |
HO91 |
O9 |
C22 |
H22 |
298.2 |
305.5 |
C23 |
C24 |
H24 |
O11 |
122.0 |
120.2 |
C23 |
C24 |
H24 |
C25 |
241.3 |
240.3 |
H24 |
C24 |
C23 |
H23 |
184.5 |
182.9 |
O11 |
C24 |
H24 |
C25 |
119.3 |
120.2 |
H24 |
C24 |
O11 |
HO11 |
301.0 |
300.1 |
H24 |
C24 |
C25 |
C26 |
64.8 |
57.7 |
H24 |
C24 |
C25 |
H25 |
185.0 |
177.7 |
HO11 |
O11 |
C24 |
C25 |
60.7 |
60.3 |
HO11 |
O11 |
C24 |
H24 |
301.0 |
300.1 |
C24 |
C25 |
H25 |
C26 |
238.1 |
240.0 |
H25 |
C25 |
C24 |
H24 |
185.0 |
177.7 |
H25 |
C25 |
C26 |
H262 |
59.8 |
300.0 |
H25 |
C25 |
C26 |
H263 |
179.8 |
60.0 |
H25 |
C25 |
C26 |
H261 |
299.8 |
180.0 |
H262 |
C26 |
C25 |
H25 |
59.8 |
300.0 |
C25 |
C26 |
H262 |
H263 |
120.0 |
120.0 |
C25 |
C26 |
H262 |
H261 |
240.0 |
240.0 |
H263 |
C26 |
H262 |
H261 |
120.0 |
120.0 |
H263 |
C26 |
C25 |
H25 |
179.8 |
60.0 |
C25 |
C26 |
H263 |
H262 |
240.0 |
240.0 |
C25 |
C26 |
H263 |
H261 |
120.0 |
120.0 |
H262 |
C26 |
H263 |
H261 |
240.0 |
240.0 |
H261 |
C26 |
C25 |
H25 |
299.8 |
180.0 |
C25 |
C26 |
H261 |
H262 |
120.0 |
120.0 |
C25 |
C26 |
H261 |
H263 |
240.0 |
240.0 |
H262 |
C26 |
H261 |
H263 |
120.0 |
120.0 |
C22 |
C21 |
H21 |
O8 |
122.6 |
119.9 |
C22 |
C21 |
H21 |
O7 |
247.3 |
240.0 |
H21 |
C21 |
C22 |
H22 |
80.7 |
62.5 |
H21 |
C21 |
O7 |
C3 |
66.6 |
45.9 |
H12 |
C12 |
C13 |
C14 |
176.8 |
180.0 |
H12 |
C12 |
C11 |
C16 |
184.7 |
180.2 |
HO51 |
O5 |
C13 |
C14 |
1.1 |
270.0 |
HO61 |
O6 |
C14 |
C15 |
0.3 |
270.0 |
C11 |
C16 |
H16 |
C15 |
180.0 |
179.8 |
H16 |
C16 |
C15 |
H15 |
1.5 |
0.0 |
C9 |
C8 |
H8 |
C7 |
180.0 |
180.1 |
H8 |
C8 |
C7 |
O4 |
359.9 |
0.1 |