PDB Chemical Component Q05
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for Q05
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C07 |
C04 |
1.511 |
1.507 |
| C04 |
C03 |
1.392 |
1.383 |
| C04 |
C05 |
1.378 |
1.390 |
| C03 |
C02 |
1.391 |
1.392 |
| C05 |
C06 |
1.393 |
1.380 |
| C02 |
N02 |
1.342 |
1.390 |
| C02 |
N01 |
1.340 |
1.324 |
| C06 |
N01 |
1.344 |
1.320 |
| C06 |
C08 |
1.517 |
1.507 |
| C13 |
C12 |
1.406 |
1.382 |
| C13 |
C14 |
1.399 |
1.383 |
| C12 |
C11 |
1.388 |
1.387 |
| C14 |
C15 |
1.393 |
1.382 |
| C11 |
O09 |
1.370 |
1.360 |
| C11 |
C16 |
1.387 |
1.387 |
| O09 |
C08 |
1.428 |
1.428 |
| C15 |
C16 |
1.401 |
1.381 |
| C15 |
C17 |
1.503 |
1.507 |
| C17 |
N18 |
1.461 |
1.469 |
| C20 |
C21 |
1.517 |
1.507 |
| C20 |
C19 |
1.536 |
1.530 |
| N18 |
C19 |
1.461 |
1.469 |
| C21 |
C22 |
1.397 |
1.381 |
| C21 |
C26 |
1.398 |
1.382 |
| C22 |
C23 |
1.398 |
1.386 |
| C26 |
C25 |
1.399 |
1.382 |
| C23 |
F23 |
1.347 |
1.351 |
| C23 |
C24 |
1.397 |
1.385 |
| C25 |
C24 |
1.396 |
1.382 |
| C24 |
H1 |
1.080 |
1.079 |
| C25 |
H2 |
1.080 |
1.080 |
| C22 |
H3 |
1.080 |
1.080 |
| C26 |
H4 |
1.080 |
1.080 |
| C20 |
H5 |
1.100 |
1.091 |
| C20 |
H6 |
1.100 |
1.090 |
| C19 |
H7 |
1.100 |
1.090 |
| C19 |
H8 |
1.100 |
1.091 |
| N18 |
H9 |
1.000 |
1.009 |
| C17 |
H11 |
1.100 |
1.090 |
| C17 |
H12 |
1.100 |
1.090 |
| C14 |
H13 |
1.080 |
1.081 |
| C13 |
H14 |
1.080 |
1.080 |
| C12 |
H15 |
1.080 |
1.080 |
| C16 |
H16 |
1.080 |
1.080 |
| C08 |
H17 |
1.100 |
1.091 |
| C08 |
H18 |
1.100 |
1.091 |
| N02 |
H19 |
1.000 |
0.969 |
| N02 |
H20 |
1.000 |
0.971 |
| C03 |
H21 |
1.080 |
1.080 |
| C05 |
H22 |
1.080 |
1.080 |
| C07 |
H23 |
1.100 |
1.090 |
| C07 |
H24 |
1.100 |
1.091 |
| C07 |
H25 |
1.100 |
1.091 |
Bond Angles for Q05
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C03 |
H21 |
120.6 |
120.4 |
| C04 |
C05 |
H22 |
119.8 |
120.3 |
| C02 |
N02 |
H19 |
109.5 |
120.0 |
| C02 |
N02 |
H20 |
109.5 |
120.0 |
| C06 |
C08 |
H17 |
109.6 |
109.5 |
| C06 |
C08 |
H18 |
109.6 |
109.5 |
| C13 |
C12 |
C11 |
120.2 |
119.9 |
| C12 |
C13 |
H14 |
119.5 |
120.0 |
| C13 |
C12 |
H15 |
119.9 |
120.0 |
| C13 |
C14 |
H13 |
120.9 |
119.9 |
| C12 |
C11 |
O09 |
119.1 |
120.0 |
| C12 |
C11 |
C16 |
119.0 |
119.9 |
| C11 |
C12 |
H15 |
119.9 |
120.1 |
| C14 |
C15 |
C16 |
120.8 |
120.0 |
| C11 |
O09 |
C08 |
124.4 |
117.0 |
| C11 |
C16 |
H16 |
119.6 |
120.1 |
| O09 |
C08 |
H17 |
109.6 |
109.5 |
| O09 |
C08 |
H18 |
109.6 |
109.5 |
| C15 |
C16 |
H16 |
119.5 |
120.0 |
| C15 |
C17 |
H11 |
110.8 |
109.5 |
| C15 |
C17 |
H12 |
110.8 |
109.5 |
| C17 |
N18 |
H9 |
106.3 |
110.9 |
| C19 |
C20 |
H5 |
108.4 |
109.4 |
| C19 |
C20 |
H6 |
108.3 |
109.5 |
| C20 |
C19 |
H7 |
108.1 |
109.5 |
| C20 |
C19 |
H8 |
108.2 |
109.5 |
| N18 |
C19 |
H7 |
108.2 |
109.4 |
| N18 |
C19 |
H8 |
108.1 |
109.5 |
| C21 |
C22 |
H3 |
119.5 |
120.1 |
| C21 |
C26 |
H4 |
120.0 |
120.0 |
| C26 |
C25 |
H2 |
119.7 |
120.0 |
| C23 |
C24 |
H1 |
120.3 |
120.0 |
| C25 |
C24 |
H1 |
120.3 |
120.0 |
| H5 |
C20 |
H6 |
109.5 |
109.5 |
| H7 |
C19 |
H8 |
109.5 |
109.5 |
| H11 |
C17 |
H12 |
109.5 |
109.4 |
| H17 |
C08 |
H18 |
109.5 |
109.4 |
| H19 |
N02 |
H20 |
109.5 |
120.0 |
| H23 |
C07 |
H24 |
109.4 |
109.5 |
| H23 |
C07 |
H25 |
109.5 |
109.4 |
| H24 |
C07 |
H25 |
109.4 |
109.5 |
Torsion Angles for Q05
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C07 |
C04 |
C03 |
H21 |
359.8 |
360.0 |
| C07 |
C04 |
C05 |
H22 |
360.0 |
359.9 |
| C05 |
C04 |
C03 |
H21 |
182.1 |
179.8 |
| C03 |
C02 |
N02 |
H19 |
182.2 |
180.0 |
| C03 |
C02 |
N02 |
H20 |
302.3 |
0.1 |
| C05 |
C06 |
C08 |
H17 |
94.3 |
239.7 |
| C05 |
C06 |
C08 |
H18 |
214.5 |
119.8 |
| H19 |
N02 |
C02 |
H20 |
240.0 |
179.9 |
| N01 |
C06 |
C08 |
H17 |
275.5 |
60.0 |
| N01 |
C06 |
C08 |
H18 |
35.7 |
300.1 |
| O09 |
C08 |
C06 |
H17 |
240.1 |
120.0 |
| O09 |
C08 |
C06 |
H18 |
119.9 |
240.0 |
| H17 |
C08 |
C06 |
H18 |
239.8 |
119.9 |
| C12 |
C13 |
C14 |
H13 |
179.4 |
180.0 |
| C13 |
C12 |
C11 |
O09 |
179.9 |
180.1 |
| C13 |
C12 |
C11 |
C16 |
358.7 |
0.0 |
| C11 |
C12 |
C13 |
H15 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
0.8 |
359.9 |
| C11 |
C12 |
C13 |
H14 |
180.9 |
180.0 |
| C13 |
C12 |
C11 |
H15 |
180.0 |
180.0 |
| C12 |
C11 |
O09 |
C08 |
196.2 |
360.0 |
| C12 |
C11 |
C16 |
H16 |
181.4 |
180.3 |
| C14 |
C15 |
C16 |
H16 |
178.8 |
179.8 |
| C14 |
C15 |
C17 |
H11 |
24.0 |
150.2 |
| C14 |
C15 |
C17 |
H12 |
145.7 |
30.3 |
| C12 |
C11 |
O09 |
C16 |
178.8 |
180.0 |
| O09 |
C11 |
C12 |
H15 |
359.9 |
0.1 |
| O09 |
C11 |
C16 |
H16 |
0.2 |
0.2 |
| C11 |
O09 |
C08 |
H17 |
20.2 |
300.0 |
| C11 |
O09 |
C08 |
H18 |
260.0 |
60.0 |
| C12 |
C11 |
C16 |
O09 |
181.2 |
180.0 |
| C16 |
C11 |
C12 |
H15 |
178.7 |
180.0 |
| C15 |
C16 |
C11 |
H16 |
180.0 |
179.7 |
| C06 |
C08 |
O09 |
H17 |
119.9 |
240.0 |
| C06 |
C08 |
O09 |
H18 |
240.1 |
120.0 |
| H17 |
C08 |
O09 |
H18 |
120.2 |
240.0 |
| C12 |
C11 |
C16 |
C15 |
1.4 |
360.0 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
180.3 |
| C16 |
C15 |
C17 |
H11 |
202.0 |
330.0 |
| C16 |
C15 |
C17 |
H12 |
323.8 |
210.0 |
| C15 |
C17 |
N18 |
H9 |
232.2 |
304.0 |
| H11 |
C17 |
C15 |
H12 |
238.2 |
120.0 |
| C17 |
N18 |
C19 |
H7 |
197.3 |
60.0 |
| C17 |
N18 |
C19 |
H8 |
78.8 |
300.0 |
| C20 |
C21 |
C22 |
H3 |
0.4 |
0.0 |
| C20 |
C21 |
C26 |
H4 |
359.7 |
360.0 |
| N18 |
C19 |
C20 |
H7 |
239.2 |
240.0 |
| N18 |
C19 |
C20 |
H8 |
120.8 |
120.0 |
| H5 |
C20 |
C19 |
H6 |
118.7 |
120.0 |
| H7 |
C19 |
C20 |
H8 |
241.6 |
240.0 |
| N18 |
C19 |
C20 |
H5 |
37.5 |
60.0 |
| N18 |
C19 |
C20 |
H6 |
278.8 |
300.0 |
| C20 |
C19 |
N18 |
H7 |
120.8 |
120.0 |
| C20 |
C19 |
N18 |
H8 |
239.2 |
240.0 |
| H7 |
C19 |
N18 |
H8 |
118.5 |
120.0 |
| C26 |
C21 |
C22 |
H3 |
179.5 |
180.0 |
| C21 |
C26 |
C25 |
H2 |
179.6 |
179.8 |
| C22 |
C23 |
C24 |
H1 |
180.0 |
180.3 |
| C26 |
C25 |
C24 |
H1 |
180.1 |
180.0 |
| C25 |
C24 |
C23 |
H1 |
180.0 |
180.0 |
| C23 |
C24 |
C25 |
H1 |
180.0 |
180.0 |
| H2 |
C25 |
C24 |
H1 |
0.1 |
359.9 |
| H4 |
C26 |
C25 |
H2 |
359.6 |
0.1 |
| C19 |
C20 |
H5 |
H6 |
242.0 |
240.0 |
| H5 |
C20 |
C19 |
H7 |
158.3 |
180.0 |
| H5 |
C20 |
C19 |
H8 |
276.7 |
300.0 |
| C19 |
C20 |
H6 |
H5 |
118.0 |
119.9 |
| H6 |
C20 |
C19 |
H7 |
39.6 |
60.0 |
| H6 |
C20 |
C19 |
H8 |
158.0 |
180.0 |
| H7 |
C19 |
C20 |
H5 |
158.3 |
180.0 |
| H7 |
C19 |
C20 |
H6 |
39.6 |
60.0 |
| C20 |
C19 |
H7 |
H8 |
117.6 |
120.0 |
| N18 |
C19 |
H7 |
H8 |
242.4 |
240.0 |
| H8 |
C19 |
C20 |
H5 |
276.7 |
300.0 |
| H8 |
C19 |
C20 |
H6 |
158.0 |
180.0 |
| C20 |
C19 |
H8 |
H7 |
242.4 |
240.0 |
| N18 |
C19 |
H8 |
H7 |
117.6 |
120.0 |
| H9 |
N18 |
C19 |
H7 |
75.6 |
296.1 |
| H9 |
N18 |
C19 |
H8 |
317.1 |
176.1 |
| C15 |
C17 |
H11 |
H12 |
122.5 |
240.0 |
| H11 |
C17 |
N18 |
H9 |
113.1 |
64.0 |
| C15 |
C17 |
H12 |
H11 |
237.5 |
120.0 |
| H12 |
C17 |
N18 |
H9 |
351.4 |
184.0 |
| H13 |
C14 |
C15 |
C16 |
180.7 |
180.0 |
| H14 |
C13 |
C12 |
C11 |
180.9 |
180.0 |
| H14 |
C13 |
C12 |
H15 |
0.9 |
0.0 |
| H14 |
C13 |
C14 |
H13 |
359.4 |
360.0 |
| C13 |
C12 |
H15 |
C11 |
180.0 |
180.0 |
| H15 |
C12 |
C13 |
H14 |
0.9 |
0.0 |
| H15 |
C12 |
C11 |
O09 |
359.9 |
0.1 |
| H15 |
C12 |
C11 |
C16 |
178.7 |
180.0 |
| C06 |
C08 |
H17 |
H18 |
120.3 |
240.0 |
| O09 |
C08 |
H17 |
H18 |
239.8 |
120.0 |
| C06 |
C08 |
H18 |
H17 |
239.7 |
120.0 |
| O09 |
C08 |
H18 |
H17 |
120.2 |
240.0 |
| C02 |
N02 |
H19 |
H20 |
120.0 |
180.1 |
| C02 |
N02 |
H20 |
H19 |
240.0 |
179.9 |
| H24 |
C07 |
H23 |
H25 |
119.9 |
120.0 |
| H23 |
C07 |
H24 |
H25 |
240.1 |
240.0 |
| H23 |
C07 |
H25 |
H24 |
119.9 |
120.0 |