PDB Chemical Component Q02
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for Q02
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
P |
1.601 |
1.480 |
C5 |
C6 |
1.396 |
1.383 |
C5 |
C4 |
1.395 |
1.383 |
C6 |
C1 |
1.394 |
1.382 |
C4 |
C3 |
1.393 |
1.382 |
O |
P |
1.486 |
1.610 |
P |
O2 |
1.613 |
1.611 |
P |
C |
1.829 |
1.823 |
C1 |
C |
1.489 |
1.506 |
C1 |
C2 |
1.393 |
1.382 |
C3 |
C2 |
1.399 |
1.381 |
C |
N |
1.454 |
1.469 |
O |
H1 |
0.950 |
0.967 |
O2 |
H2 |
0.950 |
0.967 |
C |
H3 |
1.100 |
1.090 |
N |
H4 |
1.000 |
1.010 |
N |
H5 |
1.000 |
1.009 |
C6 |
H7 |
1.080 |
1.080 |
C5 |
H8 |
1.080 |
1.080 |
C4 |
H9 |
1.080 |
1.080 |
C3 |
H10 |
1.080 |
1.081 |
C2 |
H11 |
1.080 |
1.081 |
Bond Angles for Q02
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
P |
O2 |
111.3 |
109.5 |
O1 |
P |
C |
112.4 |
109.5 |
C5 |
C6 |
H7 |
119.9 |
120.0 |
C5 |
C4 |
C3 |
119.5 |
120.0 |
C4 |
C5 |
H8 |
119.8 |
120.0 |
C5 |
C4 |
H9 |
120.3 |
120.0 |
C6 |
C1 |
C2 |
119.6 |
120.0 |
C4 |
C3 |
C2 |
120.2 |
120.0 |
C3 |
C4 |
H9 |
120.3 |
120.1 |
C4 |
C3 |
H10 |
119.9 |
119.9 |
O |
P |
O2 |
111.0 |
109.5 |
O |
P |
C |
108.3 |
109.5 |
P |
O |
H1 |
109.5 |
114.0 |
O2 |
P |
C |
102.5 |
109.4 |
P |
O2 |
H2 |
109.5 |
114.0 |
P |
C |
N |
110.1 |
109.4 |
P |
C |
H3 |
104.6 |
109.4 |
C1 |
C |
H3 |
108.1 |
109.5 |
C1 |
C2 |
C3 |
120.2 |
120.0 |
C1 |
C2 |
H11 |
119.9 |
120.0 |
C2 |
C3 |
H10 |
119.9 |
120.0 |
C3 |
C2 |
H11 |
119.9 |
120.0 |
N |
C |
H3 |
108.5 |
109.5 |
C |
N |
H4 |
109.5 |
111.1 |
C |
N |
H5 |
109.5 |
111.0 |
H4 |
N |
H5 |
109.4 |
111.0 |
Torsion Angles for Q02
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
P |
O1 |
O2 |
235.8 |
120.0 |
O |
P |
O1 |
C |
121.4 |
240.0 |
O1 |
P |
O |
H1 |
360.0 |
300.0 |
O2 |
P |
O1 |
C |
245.6 |
120.0 |
O1 |
P |
O2 |
H2 |
360.0 |
180.0 |
O1 |
P |
C |
N |
292.4 |
295.0 |
O1 |
P |
C |
H3 |
176.0 |
175.0 |
C5 |
C6 |
C1 |
C2 |
0.2 |
0.3 |
C4 |
C5 |
C6 |
H7 |
179.8 |
180.1 |
C5 |
C4 |
C3 |
C2 |
0.0 |
359.8 |
C3 |
C4 |
C5 |
H9 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H10 |
180.0 |
180.0 |
C6 |
C1 |
C |
H3 |
252.1 |
155.3 |
C6 |
C1 |
C2 |
C3 |
359.9 |
359.5 |
C6 |
C1 |
C2 |
H11 |
179.9 |
179.7 |
C3 |
C4 |
C5 |
H8 |
180.1 |
179.9 |
C5 |
C4 |
C3 |
H9 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.0 |
0.4 |
C2 |
C3 |
C4 |
H10 |
180.0 |
179.9 |
C4 |
C3 |
C2 |
H11 |
180.0 |
180.2 |
O1 |
P |
O |
O2 |
124.4 |
240.0 |
O1 |
P |
O |
C |
236.2 |
120.0 |
O2 |
P |
O |
C |
111.8 |
240.0 |
O |
P |
O2 |
H2 |
124.2 |
60.0 |
O |
P |
C |
N |
169.5 |
55.0 |
O |
P |
C |
H3 |
53.1 |
295.0 |
O1 |
P |
O2 |
C |
120.4 |
240.0 |
O |
P |
O2 |
C |
244.6 |
120.0 |
O2 |
P |
O |
H1 |
235.6 |
60.0 |
O2 |
P |
C |
N |
52.1 |
175.0 |
O2 |
P |
C |
H3 |
295.7 |
55.1 |
O1 |
P |
C |
O2 |
240.3 |
120.0 |
O |
P |
C |
O2 |
117.4 |
240.0 |
C |
P |
O |
H1 |
123.8 |
180.0 |
C |
P |
O2 |
H2 |
239.6 |
300.0 |
C1 |
C |
P |
H3 |
240.6 |
239.9 |
N |
C |
P |
H3 |
116.4 |
120.0 |
P |
C |
N |
H4 |
180.0 |
296.0 |
P |
C |
N |
H5 |
300.0 |
60.0 |
P |
C |
C1 |
H3 |
117.5 |
120.0 |
N |
C |
C1 |
H3 |
242.5 |
240.0 |
C1 |
C |
N |
H4 |
51.1 |
176.1 |
C1 |
C |
N |
H5 |
171.1 |
300.1 |
C4 |
C3 |
C2 |
C1 |
0.0 |
0.4 |
C2 |
C1 |
C |
H3 |
71.0 |
335.1 |
C1 |
C2 |
C3 |
H10 |
180.0 |
180.3 |
C3 |
C2 |
C1 |
H11 |
180.0 |
179.8 |
C2 |
C3 |
C4 |
H9 |
180.0 |
179.8 |
C4 |
C3 |
C2 |
H10 |
180.0 |
180.1 |
C1 |
C2 |
C3 |
H11 |
180.0 |
180.2 |
P |
C |
N |
H3 |
246.1 |
240.1 |
C1 |
C |
N |
H3 |
117.2 |
120.1 |
H4 |
N |
C |
H5 |
240.0 |
236.0 |
H1 |
O |
P |
O2 |
235.6 |
60.0 |
H1 |
O |
P |
C |
123.8 |
180.0 |
H2 |
O2 |
P |
C |
239.6 |
300.0 |
P |
C |
H3 |
N |
117.5 |
119.9 |
H3 |
C |
N |
H4 |
293.9 |
56.0 |
H3 |
C |
N |
H5 |
53.9 |
180.0 |
H4 |
N |
C |
H3 |
293.9 |
56.0 |
C |
N |
H4 |
H5 |
120.0 |
124.0 |
H5 |
N |
C |
H3 |
53.9 |
180.0 |
C |
N |
H5 |
H4 |
240.0 |
236.0 |
H7 |
C6 |
C1 |
C2 |
180.2 |
180.2 |
H8 |
C5 |
C6 |
H7 |
359.8 |
0.2 |
H8 |
C5 |
C4 |
C3 |
180.1 |
179.9 |
H8 |
C5 |
C4 |
H9 |
0.1 |
359.9 |
C5 |
C4 |
H9 |
C3 |
180.0 |
180.0 |
H9 |
C4 |
C5 |
H8 |
0.1 |
359.9 |
H9 |
C4 |
C3 |
C2 |
180.0 |
179.8 |
H9 |
C4 |
C3 |
H10 |
360.0 |
360.0 |
C4 |
C3 |
H10 |
C2 |
180.0 |
179.9 |
H10 |
C3 |
C4 |
H9 |
360.0 |
360.0 |
H10 |
C3 |
C2 |
H11 |
0.0 |
0.1 |
C1 |
C2 |
H11 |
C3 |
180.0 |
179.8 |
H11 |
C2 |
C3 |
H10 |
0.0 |
0.1 |